RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 COX7CP15954 63 aa6.92□□□□□ -1.3
UBXN1-209ENST00000528907 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
UBXN1-209ENST00000528907 S4R3F8 94 aa6.92□□□□□ -1.3
UBXN1-209ENST00000528907 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
UBXN1-209ENST00000528907 LCA10Q71F78 164 aa6.89□□□□□ -1.31
UBXN1-209ENST00000528907 DMAC1Q96GE9 116 aa6.89□□□□□ -1.31
UBXN1-209ENST00000528907 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
UBXN1-209ENST00000528907 MT2AP02795 61 aa6.84□□□□□ -1.31
UBXN1-209ENST00000528907 CSAG1Q6PB30 78 aa6.84□□□□□ -1.31
UBXN1-209ENST00000528907 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
UBXN1-209ENST00000528907 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
UBXN1-209ENST00000528907 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
UBXN1-209ENST00000528907 NDUFC1O43677 76 aa6.8□□□□□ -1.32
UBXN1-209ENST00000528907 USH2AO75445 5202 aa6.8□□□□□ -1.32
UBXN1-209ENST00000528907 MT1FP04733 61 aa6.78□□□□□ -1.32
UBXN1-209ENST00000528907 ACYP2P14621 99 aa6.78□□□□□ -1.32
UBXN1-209ENST00000528907 H7BZZ5 65 aa6.73□□□□□ -1.33
UBXN1-209ENST00000528907 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
UBXN1-209ENST00000528907 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.33
UBXN1-209ENST00000528907 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
UBXN1-209ENST00000528907 H0YAA0 97 aa6.71□□□□□ -1.34
UBXN1-209ENST00000528907 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
UBXN1-209ENST00000528907 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.34
UBXN1-209ENST00000528907 KRTAP9-3Q9BYQ3 159 aa6.69□□□□□ -1.34
UBXN1-209ENST00000528907 CCDC179H3BU77 68 aa6.67□□□□□ -1.34
UBXN1-209ENST00000528907 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
UBXN1-209ENST00000528907 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
UBXN1-209ENST00000528907 SPTSSBQ8NFR3 76 aa6.63□□□□□ -1.35
UBXN1-209ENST00000528907 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
UBXN1-209ENST00000528907 COA5Q86WW8 74 aa6.57□□□□□ -1.36
UBXN1-209ENST00000528907 CRIPTQ9P021 101 aa6.57□□□□□ -1.36
UBXN1-209ENST00000528907 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
UBXN1-209ENST00000528907 ATP5EP56381 51 aaPredicted RBP6.55□□□□□ -1.36
UBXN1-209ENST00000528907 ADM2Q7Z4H4 148 aa6.54□□□□□ -1.36
UBXN1-209ENST00000528907 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
UBXN1-209ENST00000528907 TMEM258P61165 79 aa6.5□□□□□ -1.37
UBXN1-209ENST00000528907 P0C880 135 aa6.45□□□□□ -1.38
UBXN1-209ENST00000528907 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
UBXN1-209ENST00000528907 KRTAP6-3Q3LI67 103 aa6.37□□□□□ -1.39
UBXN1-209ENST00000528907 R4GN34 69 aa6.36□□□□□ -1.39
UBXN1-209ENST00000528907 MT1BP07438 61 aa6.35□□□□□ -1.39
UBXN1-209ENST00000528907 Q5VV11 94 aa6.35□□□□□ -1.39
UBXN1-209ENST00000528907 PCP4P48539 62 aa6.34□□□□□ -1.39
UBXN1-209ENST00000528907 KRTAP19-6Q3LI70 58 aa6.32□□□□□ -1.4
UBXN1-209ENST00000528907 NEBP20929 6669 aa6.31□□□□□ -1.4
UBXN1-209ENST00000528907 M0QZ58 72 aa6.31□□□□□ -1.4
UBXN1-209ENST00000528907 SEC61GP60059 68 aa6.31□□□□□ -1.4
UBXN1-209ENST00000528907 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
UBXN1-209ENST00000528907 A0A1B0GU69 56 aa6.23□□□□□ -1.41
UBXN1-209ENST00000528907 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
UBXN1-209ENST00000528907 A0A1B0GU33 70 aa6.18□□□□□ -1.42
UBXN1-209ENST00000528907 A6NN06 94 aa6.18□□□□□ -1.42
UBXN1-209ENST00000528907 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
UBXN1-209ENST00000528907 PLAC4Q8WY50 150 aa6.16□□□□□ -1.42
UBXN1-209ENST00000528907 PRR15LQ9BU68 103 aa6.16□□□□□ -1.42
UBXN1-209ENST00000528907 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.42
UBXN1-209ENST00000528907 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.43
UBXN1-209ENST00000528907 LINC01554Q52M75 96 aa6.14□□□□□ -1.43
UBXN1-209ENST00000528907 KRTAP10-5P60370 271 aa6.13□□□□□ -1.43
UBXN1-209ENST00000528907 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
UBXN1-209ENST00000528907 KRTAP4-8Q9BYQ9 185 aa6.1□□□□□ -1.43
UBXN1-209ENST00000528907 V9GYY9 64 aa6.09□□□□□ -1.43
UBXN1-209ENST00000528907 Q1T7F1 81 aa6.07□□□□□ -1.44
UBXN1-209ENST00000528907 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
UBXN1-209ENST00000528907 SMIM26A0A096LP01 95 aa6.06□□□□□ -1.44
UBXN1-209ENST00000528907 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
UBXN1-209ENST00000528907 MT1XP80297 61 aa6.03□□□□□ -1.44
UBXN1-209ENST00000528907 UQCR11O14957 56 aa5.97□□□□□ -1.45
UBXN1-209ENST00000528907 A0A0D9SG42 100 aa5.96□□□□□ -1.46
UBXN1-209ENST00000528907 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
UBXN1-209ENST00000528907 A8MU10 97 aa5.91□□□□□ -1.46
UBXN1-209ENST00000528907 PSPHP1O15172 72 aa5.9□□□□□ -1.46
UBXN1-209ENST00000528907 MDN1Q9NU22 5596 aa5.9□□□□□ -1.47
UBXN1-209ENST00000528907 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
UBXN1-209ENST00000528907 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
UBXN1-209ENST00000528907 CAMK2N1Q7Z7J9 78 aa5.88□□□□□ -1.47
UBXN1-209ENST00000528907 KMT2DO14686 5537 aa5.87□□□□□ -1.47
UBXN1-209ENST00000528907 H3BS24 57 aa5.86□□□□□ -1.47
UBXN1-209ENST00000528907 KRTAP5-9P26371 169 aa5.86□□□□□ -1.47
UBXN1-209ENST00000528907 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
UBXN1-209ENST00000528907 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
UBXN1-209ENST00000528907 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
UBXN1-209ENST00000528907 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
UBXN1-209ENST00000528907 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
UBXN1-209ENST00000528907 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
UBXN1-209ENST00000528907 A6NED7 52 aa5.74□□□□□ -1.49
UBXN1-209ENST00000528907 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
UBXN1-209ENST00000528907 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
UBXN1-209ENST00000528907 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
UBXN1-209ENST00000528907 K7ERS5 55 aa5.67□□□□□ -1.5
UBXN1-209ENST00000528907 C10orf95Q9H7T3 257 aa5.64□□□□□ -1.51
UBXN1-209ENST00000528907 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
UBXN1-209ENST00000528907 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
UBXN1-209ENST00000528907 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
UBXN1-209ENST00000528907 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
UBXN1-209ENST00000528907 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
UBXN1-209ENST00000528907 SPRR2EP22531 72 aa5.59□□□□□ -1.51
UBXN1-209ENST00000528907 SPRR2BP35325 72 aa5.59□□□□□ -1.51
UBXN1-209ENST00000528907 SPRR2AP35326 72 aa5.59□□□□□ -1.51
UBXN1-209ENST00000528907 GPR98Q8WXG9 6306 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms