RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 SMIM20Q8N5G0 67 aa9.47□□□□□ -0.89
COLCA2-203ENST00000528846 H3BPC8 53 aa9.45□□□□□ -0.9
COLCA2-203ENST00000528846 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
COLCA2-203ENST00000528846 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
COLCA2-203ENST00000528846 KLKP1Q107X0 134 aa9.34□□□□□ -0.91
COLCA2-203ENST00000528846 KRTAP19-6Q3LI70 58 aa9.34□□□□□ -0.91
COLCA2-203ENST00000528846 MACF1Q9UPN3 7388 aaKnown RBP9.3□□□□□ -0.92
COLCA2-203ENST00000528846 SERP2Q8N6R1 65 aa9.26□□□□□ -0.93
COLCA2-203ENST00000528846 A8MUN3 132 aa9.25□□□□□ -0.93
COLCA2-203ENST00000528846 S4R3F8 94 aa9.25□□□□□ -0.93
COLCA2-203ENST00000528846 SYNE2Q8WXH0 6885 aaKnown RBP9.24□□□□□ -0.93
COLCA2-203ENST00000528846 LCA10Q71F78 164 aa9.19□□□□□ -0.94
COLCA2-203ENST00000528846 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
COLCA2-203ENST00000528846 SNURFQ9Y675 71 aa9.15□□□□□ -0.94
COLCA2-203ENST00000528846 C20orf197Q8N268 126 aa9.14□□□□□ -0.95
COLCA2-203ENST00000528846 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
COLCA2-203ENST00000528846 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
COLCA2-203ENST00000528846 COX7CP15954 63 aa9.1□□□□□ -0.95
COLCA2-203ENST00000528846 NDUFC1O43677 76 aa9.07□□□□□ -0.96
COLCA2-203ENST00000528846 ACYP2P14621 99 aa9.01□□□□□ -0.97
COLCA2-203ENST00000528846 KRTAP6-3Q3LI67 103 aa9.01□□□□□ -0.97
COLCA2-203ENST00000528846 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
COLCA2-203ENST00000528846 ANAPC13Q9BS18 74 aa9□□□□□ -0.97
COLCA2-203ENST00000528846 A6NN06 94 aa8.87□□□□□ -0.99
COLCA2-203ENST00000528846 H0YAA0 97 aa8.87□□□□□ -0.99
COLCA2-203ENST00000528846 MT1BP07438 61 aa8.87□□□□□ -0.99
COLCA2-203ENST00000528846 Q5VV11 94 aa8.86□□□□□ -0.99
COLCA2-203ENST00000528846 H7BZZ5 65 aa8.85□□□□□ -0.99
COLCA2-203ENST00000528846 SPRR2GQ9BYE4 73 aa8.84□□□□□ -0.99
COLCA2-203ENST00000528846 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
COLCA2-203ENST00000528846 CYSTM1Q9H1C7 97 aa8.83□□□□□ -1
COLCA2-203ENST00000528846 KRTAP19-8Q3LI54 63 aa8.82□□□□□ -1
COLCA2-203ENST00000528846 SPTSSBQ8NFR3 76 aa8.82□□□□□ -1
COLCA2-203ENST00000528846 CCDC179H3BU77 68 aa8.79□□□□□ -1
COLCA2-203ENST00000528846 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
COLCA2-203ENST00000528846 CRIPTQ9P021 101 aa8.74□□□□□ -1.01
COLCA2-203ENST00000528846 KRTAP10-5P60370 271 aa8.71□□□□□ -1.02
COLCA2-203ENST00000528846 COA5Q86WW8 74 aa8.69□□□□□ -1.02
COLCA2-203ENST00000528846 NEBP20929 6669 aa8.68□□□□□ -1.02
COLCA2-203ENST00000528846 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
COLCA2-203ENST00000528846 P0C880 135 aa8.59□□□□□ -1.03
COLCA2-203ENST00000528846 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
COLCA2-203ENST00000528846 MUC12Q9UKN1 5478 aa8.58□□□□□ -1.04
COLCA2-203ENST00000528846 TMEM258P61165 79 aa8.52□□□□□ -1.05
COLCA2-203ENST00000528846 R4GN34 69 aa8.51□□□□□ -1.05
COLCA2-203ENST00000528846 KRTAP5-9P26371 169 aa8.5□□□□□ -1.05
COLCA2-203ENST00000528846 M0QZ58 72 aa8.45□□□□□ -1.06
COLCA2-203ENST00000528846 KRTAP20-1Q3LI63 56 aa8.45□□□□□ -1.06
COLCA2-203ENST00000528846 SEC61GP60059 68 aa8.43□□□□□ -1.06
COLCA2-203ENST00000528846 SERP1Q9Y6X1 66 aa8.4□□□□□ -1.06
COLCA2-203ENST00000528846 KMT2DO14686 5537 aa8.39□□□□□ -1.07
COLCA2-203ENST00000528846 PCP4P48539 62 aa8.39□□□□□ -1.07
COLCA2-203ENST00000528846 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
COLCA2-203ENST00000528846 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
COLCA2-203ENST00000528846 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
COLCA2-203ENST00000528846 PLAC4Q8WY50 150 aa8.28□□□□□ -1.08
COLCA2-203ENST00000528846 A0A1B0GU69 56 aa8.27□□□□□ -1.09
COLCA2-203ENST00000528846 MT1XP80297 61 aa8.27□□□□□ -1.09
COLCA2-203ENST00000528846 SPRR2FQ96RM1 72 aa8.24□□□□□ -1.09
COLCA2-203ENST00000528846 A0A1B0GU33 70 aa8.21□□□□□ -1.1
COLCA2-203ENST00000528846 KRTAP13-4Q3LI77 160 aa8.19□□□□□ -1.1
COLCA2-203ENST00000528846 KRTAP2-3P0C7H8 128 aa8.18□□□□□ -1.1
COLCA2-203ENST00000528846 KRTAP2-4Q9BYR9 128 aa8.18□□□□□ -1.1
COLCA2-203ENST00000528846 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
COLCA2-203ENST00000528846 SPRR2EP22531 72 aa8.17□□□□□ -1.1
COLCA2-203ENST00000528846 SPRR2BP35325 72 aa8.17□□□□□ -1.1
COLCA2-203ENST00000528846 SPRR2AP35326 72 aa8.17□□□□□ -1.1
COLCA2-203ENST00000528846 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
COLCA2-203ENST00000528846 KRTAP8-1Q8IUC2 63 aa8.15□□□□□ -1.1
COLCA2-203ENST00000528846 KRTAP12-2P59991 146 aa8.09□□□□□ -1.11
COLCA2-203ENST00000528846 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
COLCA2-203ENST00000528846 LCE1AQ5T7P2 110 aa8.02□□□□□ -1.13
COLCA2-203ENST00000528846 A0A0D9SG42 100 aa8.01□□□□□ -1.13
COLCA2-203ENST00000528846 V9GYY9 64 aa8.01□□□□□ -1.13
COLCA2-203ENST00000528846 KRTAP4-8A0A0G2JLE6 195 aa8□□□□□ -1.13
COLCA2-203ENST00000528846 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
COLCA2-203ENST00000528846 SMIM26A0A096LP01 95 aa7.99□□□□□ -1.13
COLCA2-203ENST00000528846 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
COLCA2-203ENST00000528846 Q1T7F1 81 aa7.95□□□□□ -1.14
COLCA2-203ENST00000528846 KRTAP2-2Q9BYT5 123 aa7.91□□□□□ -1.14
COLCA2-203ENST00000528846 KRTAP2-1Q9BYU5 128 aa7.91□□□□□ -1.14
COLCA2-203ENST00000528846 UQCR11O14957 56 aa7.9□□□□□ -1.14
COLCA2-203ENST00000528846 SPRR2DP22532 72 aa7.9□□□□□ -1.14
COLCA2-203ENST00000528846 KRTAP10-7P60409 375 aaPredicted RBP7.9□□□□□ -1.14
COLCA2-203ENST00000528846 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
COLCA2-203ENST00000528846 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.14
COLCA2-203ENST00000528846 KRTAP12-1P59990 96 aa7.88□□□□□ -1.15
COLCA2-203ENST00000528846 A8MU10 97 aa7.87□□□□□ -1.15
COLCA2-203ENST00000528846 KRTAP10-12P60413 245 aa7.84□□□□□ -1.15
COLCA2-203ENST00000528846 PSPHP1O15172 72 aa7.83□□□□□ -1.16
COLCA2-203ENST00000528846 MIR22HGQ0VDD5 57 aa7.75□□□□□ -1.17
COLCA2-203ENST00000528846 LCE3BQ5TA77 95 aa7.69□□□□□ -1.18
COLCA2-203ENST00000528846 A6NED7 52 aa7.61□□□□□ -1.19
COLCA2-203ENST00000528846 K7ERS5 55 aa7.55□□□□□ -1.2
COLCA2-203ENST00000528846 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
COLCA2-203ENST00000528846 TNP1P09430 55 aa7.42□□□□□ -1.22
COLCA2-203ENST00000528846 KRTAP19-7Q3SYF9 63 aa7.38□□□□□ -1.23
COLCA2-203ENST00000528846 CDC42SE1Q9NRR8 79 aa7.37□□□□□ -1.23
COLCA2-203ENST00000528846 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
COLCA2-203ENST00000528846 MT1EP04732 61 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms