RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
SDC2-203ENST00000519587 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
SDC2-203ENST00000519587 SPANXA2-OT1Q8N9U9 137 aa6.94□□□□□ -1.3
SDC2-203ENST00000519587 S4R3F8 94 aa6.94□□□□□ -1.3
SDC2-203ENST00000519587 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
SDC2-203ENST00000519587 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
SDC2-203ENST00000519587 H7BZZ5 65 aa6.88□□□□□ -1.31
SDC2-203ENST00000519587 ACYP2P14621 99 aa6.87□□□□□ -1.31
SDC2-203ENST00000519587 LCA10Q71F78 164 aa6.86□□□□□ -1.31
SDC2-203ENST00000519587 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
SDC2-203ENST00000519587 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
SDC2-203ENST00000519587 KRTAP10-6P60371 365 aaPredicted RBP6.82□□□□□ -1.32
SDC2-203ENST00000519587 CHKB-CPT1BH3BT56 60 aa6.79□□□□□ -1.32
SDC2-203ENST00000519587 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
SDC2-203ENST00000519587 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
SDC2-203ENST00000519587 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
SDC2-203ENST00000519587 TMEM258P61165 79 aa6.75□□□□□ -1.33
SDC2-203ENST00000519587 PCP4P48539 62 aa6.71□□□□□ -1.34
SDC2-203ENST00000519587 COA5Q86WW8 74 aa6.71□□□□□ -1.34
SDC2-203ENST00000519587 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
SDC2-203ENST00000519587 MT2AP02795 61 aa6.66□□□□□ -1.34
SDC2-203ENST00000519587 H0YAA0 97 aa6.64□□□□□ -1.35
SDC2-203ENST00000519587 KRTAP10-10P60014 251 aa6.64□□□□□ -1.35
SDC2-203ENST00000519587 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
SDC2-203ENST00000519587 USH2AO75445 5202 aa6.63□□□□□ -1.35
SDC2-203ENST00000519587 MT1FP04733 61 aa6.6□□□□□ -1.35
SDC2-203ENST00000519587 FCGBPQ9Y6R7 5405 aaPredicted RBP6.57□□□□□ -1.36
SDC2-203ENST00000519587 LCE2BO14633 110 aa6.57□□□□□ -1.36
SDC2-203ENST00000519587 ADM2Q7Z4H4 148 aa6.56□□□□□ -1.36
SDC2-203ENST00000519587 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
SDC2-203ENST00000519587 SERP1Q9Y6X1 66 aa6.52□□□□□ -1.37
SDC2-203ENST00000519587 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
SDC2-203ENST00000519587 SEC61GP60059 68 aa6.49□□□□□ -1.37
SDC2-203ENST00000519587 MACF1Q9UPN3 7388 aaKnown RBP6.49□□□□□ -1.37
SDC2-203ENST00000519587 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
SDC2-203ENST00000519587 P0C880 135 aa6.44□□□□□ -1.38
SDC2-203ENST00000519587 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
SDC2-203ENST00000519587 R4GN34 69 aa6.39□□□□□ -1.39
SDC2-203ENST00000519587 A0A1B0GU69 56 aa6.38□□□□□ -1.39
SDC2-203ENST00000519587 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
SDC2-203ENST00000519587 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
SDC2-203ENST00000519587 M0QZ58 72 aa6.35□□□□□ -1.39
SDC2-203ENST00000519587 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
SDC2-203ENST00000519587 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
SDC2-203ENST00000519587 V9GYY9 64 aa6.31□□□□□ -1.4
SDC2-203ENST00000519587 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
SDC2-203ENST00000519587 A0A1B0GU33 70 aa6.27□□□□□ -1.41
SDC2-203ENST00000519587 Q5VV11 94 aa6.27□□□□□ -1.41
SDC2-203ENST00000519587 KRTAP19-8Q3LI54 63 aa6.25□□□□□ -1.41
SDC2-203ENST00000519587 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
SDC2-203ENST00000519587 Q1T7F1 81 aa6.23□□□□□ -1.41
SDC2-203ENST00000519587 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
SDC2-203ENST00000519587 NEBP20929 6669 aa6.21□□□□□ -1.42
SDC2-203ENST00000519587 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
SDC2-203ENST00000519587 MT1BP07438 61 aa6.16□□□□□ -1.42
SDC2-203ENST00000519587 KRTAP19-6Q3LI70 58 aa6.16□□□□□ -1.42
SDC2-203ENST00000519587 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
SDC2-203ENST00000519587 A6NN06 94 aa6.14□□□□□ -1.43
SDC2-203ENST00000519587 PSPHP1O15172 72 aa6.14□□□□□ -1.43
SDC2-203ENST00000519587 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
SDC2-203ENST00000519587 UQCR11O14957 56 aa6.13□□□□□ -1.43
SDC2-203ENST00000519587 KRTAP20-1Q3LI63 56 aa6.1□□□□□ -1.43
SDC2-203ENST00000519587 A0A0D9SG42 100 aa6.09□□□□□ -1.43
SDC2-203ENST00000519587 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
SDC2-203ENST00000519587 A6NED7 52 aa6□□□□□ -1.45
SDC2-203ENST00000519587 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
SDC2-203ENST00000519587 A8MU10 97 aa5.99□□□□□ -1.45
SDC2-203ENST00000519587 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
SDC2-203ENST00000519587 SPINT4Q6UDR6 99 aa5.97□□□□□ -1.45
SDC2-203ENST00000519587 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
SDC2-203ENST00000519587 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
SDC2-203ENST00000519587 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
SDC2-203ENST00000519587 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
SDC2-203ENST00000519587 MT1XP80297 61 aa5.9□□□□□ -1.46
SDC2-203ENST00000519587 K7ERS5 55 aa5.89□□□□□ -1.47
SDC2-203ENST00000519587 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
SDC2-203ENST00000519587 MDN1Q9NU22 5596 aa5.76□□□□□ -1.49
SDC2-203ENST00000519587 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
SDC2-203ENST00000519587 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
SDC2-203ENST00000519587 KMT2DO14686 5537 aa5.71□□□□□ -1.49
SDC2-203ENST00000519587 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
SDC2-203ENST00000519587 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
SDC2-203ENST00000519587 C10orf95Q9H7T3 257 aa5.63□□□□□ -1.51
SDC2-203ENST00000519587 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
SDC2-203ENST00000519587 TNP1P09430 55 aa5.61□□□□□ -1.51
SDC2-203ENST00000519587 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
SDC2-203ENST00000519587 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
SDC2-203ENST00000519587 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
SDC2-203ENST00000519587 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
SDC2-203ENST00000519587 ROMO1P60602 79 aa5.51□□□□□ -1.53
SDC2-203ENST00000519587 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
SDC2-203ENST00000519587 GPR98Q8WXG9 6306 aa5.51□□□□□ -1.53
SDC2-203ENST00000519587 SPRR2EP22531 72 aa5.49□□□□□ -1.53
SDC2-203ENST00000519587 SPRR2BP35325 72 aa5.49□□□□□ -1.53
SDC2-203ENST00000519587 SPRR2AP35326 72 aa5.49□□□□□ -1.53
SDC2-203ENST00000519587 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
SDC2-203ENST00000519587 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
SDC2-203ENST00000519587 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
SDC2-203ENST00000519587 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
SDC2-203ENST00000519587 PRO0628Q9UI54 55 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms