RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 NDUFC1O43677 76 aa3.48□□□□□ -1.85
SCARNA6-201ENST00000515982 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
SCARNA6-201ENST00000515982 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
SCARNA6-201ENST00000515982 SPANXA2-OT1Q8N9U9 137 aa3.46□□□□□ -1.86
SCARNA6-201ENST00000515982 S4R3F8 94 aa3.46□□□□□ -1.86
SCARNA6-201ENST00000515982 ACYP2P14621 99 aa3.45□□□□□ -1.86
SCARNA6-201ENST00000515982 DMAC1Q96GE9 116 aa3.45□□□□□ -1.86
SCARNA6-201ENST00000515982 LORP23490 312 aaPredicted RBP3.44□□□□□ -1.86
SCARNA6-201ENST00000515982 CSAG1Q6PB30 78 aa3.43□□□□□ -1.86
SCARNA6-201ENST00000515982 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
SCARNA6-201ENST00000515982 H7BZZ5 65 aa3.41□□□□□ -1.86
SCARNA6-201ENST00000515982 LCA10Q71F78 164 aa3.41□□□□□ -1.86
SCARNA6-201ENST00000515982 TMEM258P61165 79 aa3.39□□□□□ -1.87
SCARNA6-201ENST00000515982 CHKB-CPT1BH3BT56 60 aa3.38□□□□□ -1.87
SCARNA6-201ENST00000515982 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
SCARNA6-201ENST00000515982 KRTAP3-3Q9BYR6 98 aa3.38□□□□□ -1.87
SCARNA6-201ENST00000515982 CYSTM1Q9H1C7 97 aa3.38□□□□□ -1.87
SCARNA6-201ENST00000515982 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
SCARNA6-201ENST00000515982 KRTAP9-8Q9BYQ0 159 aa3.35□□□□□ -1.87
SCARNA6-201ENST00000515982 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
SCARNA6-201ENST00000515982 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
SCARNA6-201ENST00000515982 MT2AP02795 61 aa3.32□□□□□ -1.88
SCARNA6-201ENST00000515982 KRTAP10-10P60014 251 aa3.32□□□□□ -1.88
SCARNA6-201ENST00000515982 COA5Q86WW8 74 aa3.32□□□□□ -1.88
SCARNA6-201ENST00000515982 H0YAA0 97 aa3.31□□□□□ -1.88
SCARNA6-201ENST00000515982 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
SCARNA6-201ENST00000515982 SERP1Q9Y6X1 66 aa3.29□□□□□ -1.88
SCARNA6-201ENST00000515982 V9GYY9 64 aa3.29□□□□□ -1.88
SCARNA6-201ENST00000515982 USH2AO75445 5202 aa3.29□□□□□ -1.88
SCARNA6-201ENST00000515982 SMIM26A0A096LP01 95 aa3.28□□□□□ -1.88
SCARNA6-201ENST00000515982 MT1FP04733 61 aa3.28□□□□□ -1.88
SCARNA6-201ENST00000515982 SEC61GP60059 68 aa3.28□□□□□ -1.88
SCARNA6-201ENST00000515982 ADM2Q7Z4H4 148 aa3.27□□□□□ -1.89
SCARNA6-201ENST00000515982 CRIPTQ9P021 101 aa3.26□□□□□ -1.89
SCARNA6-201ENST00000515982 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
SCARNA6-201ENST00000515982 KRTAP19-1Q8IUB9 90 aa3.25□□□□□ -1.89
SCARNA6-201ENST00000515982 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
SCARNA6-201ENST00000515982 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
SCARNA6-201ENST00000515982 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
SCARNA6-201ENST00000515982 P0C880 135 aa3.21□□□□□ -1.9
SCARNA6-201ENST00000515982 LCE2BO14633 110 aa3.19□□□□□ -1.9
SCARNA6-201ENST00000515982 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
SCARNA6-201ENST00000515982 R4GN34 69 aa3.19□□□□□ -1.9
SCARNA6-201ENST00000515982 A0A1B0GU69 56 aa3.18□□□□□ -1.9
SCARNA6-201ENST00000515982 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
SCARNA6-201ENST00000515982 M0QZ58 72 aa3.17□□□□□ -1.9
SCARNA6-201ENST00000515982 PMAIP1Q13794 54 aa3.17□□□□□ -1.9
SCARNA6-201ENST00000515982 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
SCARNA6-201ENST00000515982 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
SCARNA6-201ENST00000515982 LINC01558Q9Y6Z2 57 aa3.16□□□□□ -1.9
SCARNA6-201ENST00000515982 A0A1B0GU33 70 aa3.14□□□□□ -1.91
SCARNA6-201ENST00000515982 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
SCARNA6-201ENST00000515982 Q5VV11 94 aa3.13□□□□□ -1.91
SCARNA6-201ENST00000515982 Q1T7F1 81 aa3.11□□□□□ -1.91
SCARNA6-201ENST00000515982 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
SCARNA6-201ENST00000515982 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
SCARNA6-201ENST00000515982 PLAC4Q8WY50 150 aa3.09□□□□□ -1.91
SCARNA6-201ENST00000515982 MT1BP07438 61 aa3.08□□□□□ -1.92
SCARNA6-201ENST00000515982 NEBP20929 6669 aa3.08□□□□□ -1.92
SCARNA6-201ENST00000515982 A6NN06 94 aa3.07□□□□□ -1.92
SCARNA6-201ENST00000515982 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
SCARNA6-201ENST00000515982 UQCR11O14957 56 aa3.06□□□□□ -1.92
SCARNA6-201ENST00000515982 KRTAP13-4Q3LI77 160 aa3.06□□□□□ -1.92
SCARNA6-201ENST00000515982 SPATA8Q6RVD6 105 aa3.06□□□□□ -1.92
SCARNA6-201ENST00000515982 PSPHP1O15172 72 aa3.04□□□□□ -1.92
SCARNA6-201ENST00000515982 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
SCARNA6-201ENST00000515982 A0A0D9SG42 100 aa3.02□□□□□ -1.93
SCARNA6-201ENST00000515982 MIR22HGQ0VDD5 57 aa3□□□□□ -1.93
SCARNA6-201ENST00000515982 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
SCARNA6-201ENST00000515982 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
SCARNA6-201ENST00000515982 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
SCARNA6-201ENST00000515982 A8MU10 97 aa2.98□□□□□ -1.93
SCARNA6-201ENST00000515982 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
SCARNA6-201ENST00000515982 A6NED7 52 aa2.97□□□□□ -1.93
SCARNA6-201ENST00000515982 KRTAP12-1P59990 96 aa2.97□□□□□ -1.93
SCARNA6-201ENST00000515982 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
SCARNA6-201ENST00000515982 K7ERS5 55 aa2.94□□□□□ -1.94
SCARNA6-201ENST00000515982 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
SCARNA6-201ENST00000515982 MT1XP80297 61 aa2.94□□□□□ -1.94
SCARNA6-201ENST00000515982 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
SCARNA6-201ENST00000515982 KMT2DO14686 5537 aa2.92□□□□□ -1.94
SCARNA6-201ENST00000515982 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
SCARNA6-201ENST00000515982 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
SCARNA6-201ENST00000515982 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
SCARNA6-201ENST00000515982 H3BS24 57 aa2.86□□□□□ -1.95
SCARNA6-201ENST00000515982 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
SCARNA6-201ENST00000515982 TNP1P09430 55 aa2.81□□□□□ -1.96
SCARNA6-201ENST00000515982 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
SCARNA6-201ENST00000515982 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
SCARNA6-201ENST00000515982 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
SCARNA6-201ENST00000515982 C10orf95Q9H7T3 257 aa2.81□□□□□ -1.96
SCARNA6-201ENST00000515982 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
SCARNA6-201ENST00000515982 SPRR2EP22531 72 aa2.75□□□□□ -1.97
SCARNA6-201ENST00000515982 SPRR2BP35325 72 aa2.75□□□□□ -1.97
SCARNA6-201ENST00000515982 SPRR2AP35326 72 aa2.75□□□□□ -1.97
SCARNA6-201ENST00000515982 KRTAP25-1Q3LHN0 102 aa2.75□□□□□ -1.97
SCARNA6-201ENST00000515982 KRTAP8-1Q8IUC2 63 aa2.75□□□□□ -1.97
SCARNA6-201ENST00000515982 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
SCARNA6-201ENST00000515982 ROMO1P60602 79 aa2.74□□□□□ -1.97
SCARNA6-201ENST00000515982 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms