RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 HRES1P13985 223 aa4.83□□□□□ -1.64
CPNE4-213ENST00000515418 HMCN2Q8NDA2 5059 aa4.83□□□□□ -1.64
CPNE4-213ENST00000515418 SPINK7P58062 85 aa4.82□□□□□ -1.64
CPNE4-213ENST00000515418 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
CPNE4-213ENST00000515418 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
CPNE4-213ENST00000515418 SPANXA2-OT1Q8N9U9 137 aa4.8□□□□□ -1.64
CPNE4-213ENST00000515418 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
CPNE4-213ENST00000515418 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
CPNE4-213ENST00000515418 SEC61GP60059 68 aa4.76□□□□□ -1.65
CPNE4-213ENST00000515418 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
CPNE4-213ENST00000515418 MUC2Q02817 5179 aa4.74□□□□□ -1.65
CPNE4-213ENST00000515418 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
CPNE4-213ENST00000515418 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
CPNE4-213ENST00000515418 MUC17Q685J3 4493 aa4.72□□□□□ -1.65
CPNE4-213ENST00000515418 DMAC1Q96GE9 116 aa4.71□□□□□ -1.66
CPNE4-213ENST00000515418 COA5Q86WW8 74 aa4.71□□□□□ -1.66
CPNE4-213ENST00000515418 SEC61BP60468 96 aaKnown RBP4.7□□□□□ -1.66
CPNE4-213ENST00000515418 ACYP2P14621 99 aa4.69□□□□□ -1.66
CPNE4-213ENST00000515418 KRTAP4-1Q9BYQ7 146 aa4.69□□□□□ -1.66
CPNE4-213ENST00000515418 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
CPNE4-213ENST00000515418 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
CPNE4-213ENST00000515418 RNF213Q63HN8 5207 aa4.64□□□□□ -1.67
CPNE4-213ENST00000515418 A8MUN3 132 aa4.63□□□□□ -1.67
CPNE4-213ENST00000515418 CHKB-CPT1BH3BT56 60 aa4.63□□□□□ -1.67
CPNE4-213ENST00000515418 SMIM26A0A096LP01 95 aa4.62□□□□□ -1.67
CPNE4-213ENST00000515418 MPLKIPQ8TAP9 179 aa4.62□□□□□ -1.67
CPNE4-213ENST00000515418 RBM12B-AS1Q9P1G2 102 aa4.59□□□□□ -1.67
CPNE4-213ENST00000515418 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
CPNE4-213ENST00000515418 V9GYY9 64 aa4.56□□□□□ -1.68
CPNE4-213ENST00000515418 LCA10Q71F78 164 aa4.55□□□□□ -1.68
CPNE4-213ENST00000515418 Q1T7F1 81 aa4.54□□□□□ -1.68
CPNE4-213ENST00000515418 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
CPNE4-213ENST00000515418 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
CPNE4-213ENST00000515418 PSPHP1O15172 72 aa4.53□□□□□ -1.68
CPNE4-213ENST00000515418 S4R3F8 94 aa4.53□□□□□ -1.68
CPNE4-213ENST00000515418 LINC01558Q9Y6Z2 57 aa4.49□□□□□ -1.69
CPNE4-213ENST00000515418 SPTSSBQ8NFR3 76 aa4.49□□□□□ -1.69
CPNE4-213ENST00000515418 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
CPNE4-213ENST00000515418 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
CPNE4-213ENST00000515418 A0A1B0GU69 56 aa4.44□□□□□ -1.7
CPNE4-213ENST00000515418 Q5VV11 94 aa4.44□□□□□ -1.7
CPNE4-213ENST00000515418 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
CPNE4-213ENST00000515418 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
CPNE4-213ENST00000515418 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
CPNE4-213ENST00000515418 P0C880 135 aa4.36□□□□□ -1.71
CPNE4-213ENST00000515418 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
CPNE4-213ENST00000515418 A6NED7 52 aa4.34□□□□□ -1.71
CPNE4-213ENST00000515418 A8MU10 97 aa4.33□□□□□ -1.72
CPNE4-213ENST00000515418 MT1HP80294 61 aa4.33□□□□□ -1.72
CPNE4-213ENST00000515418 A0A1B0GU33 70 aa4.32□□□□□ -1.72
CPNE4-213ENST00000515418 H3BS24 57 aa4.32□□□□□ -1.72
CPNE4-213ENST00000515418 M0R2T5 61 aa4.31□□□□□ -1.72
CPNE4-213ENST00000515418 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
CPNE4-213ENST00000515418 UQCR11O14957 56 aa4.29□□□□□ -1.72
CPNE4-213ENST00000515418 SPATA8Q6RVD6 105 aa4.29□□□□□ -1.72
CPNE4-213ENST00000515418 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
CPNE4-213ENST00000515418 H0YAA0 97 aa4.28□□□□□ -1.72
CPNE4-213ENST00000515418 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
CPNE4-213ENST00000515418 MIR22HGQ0VDD5 57 aa4.26□□□□□ -1.73
CPNE4-213ENST00000515418 CDC42SE1Q9NRR8 79 aa4.23□□□□□ -1.73
CPNE4-213ENST00000515418 A0A0D9SG42 100 aa4.2□□□□□ -1.74
CPNE4-213ENST00000515418 PMAIP1Q13794 54 aa4.2□□□□□ -1.74
CPNE4-213ENST00000515418 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
CPNE4-213ENST00000515418 M0QZ58 72 aa4.19□□□□□ -1.74
CPNE4-213ENST00000515418 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
CPNE4-213ENST00000515418 R4GN34 69 aa4.18□□□□□ -1.74
CPNE4-213ENST00000515418 MT2AP02795 61 aa4.16□□□□□ -1.74
CPNE4-213ENST00000515418 LINC01554Q52M75 96 aa4.16□□□□□ -1.74
CPNE4-213ENST00000515418 MT1FP04733 61 aa4.15□□□□□ -1.74
CPNE4-213ENST00000515418 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
CPNE4-213ENST00000515418 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
CPNE4-213ENST00000515418 KRTAP12-2P59991 146 aa4.09□□□□□ -1.76
CPNE4-213ENST00000515418 SPINT4Q6UDR6 99 aa4.09□□□□□ -1.76
CPNE4-213ENST00000515418 CRIPTQ9P021 101 aa4.09□□□□□ -1.76
CPNE4-213ENST00000515418 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
CPNE4-213ENST00000515418 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
CPNE4-213ENST00000515418 A6NN06 94 aa4.03□□□□□ -1.76
CPNE4-213ENST00000515418 K7ERS5 55 aa4.02□□□□□ -1.77
CPNE4-213ENST00000515418 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
CPNE4-213ENST00000515418 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
CPNE4-213ENST00000515418 KRTAP5-9P26371 169 aa4□□□□□ -1.77
CPNE4-213ENST00000515418 USH2AO75445 5202 aa3.96□□□□□ -1.78
CPNE4-213ENST00000515418 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
CPNE4-213ENST00000515418 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
CPNE4-213ENST00000515418 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
CPNE4-213ENST00000515418 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
CPNE4-213ENST00000515418 MT1BP07438 61 aa3.92□□□□□ -1.78
CPNE4-213ENST00000515418 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
CPNE4-213ENST00000515418 ROMO1P60602 79 aa3.89□□□□□ -1.79
CPNE4-213ENST00000515418 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
CPNE4-213ENST00000515418 PRAC1Q96KF2 57 aa3.85□□□□□ -1.79
CPNE4-213ENST00000515418 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
CPNE4-213ENST00000515418 MT1XP80297 61 aa3.8□□□□□ -1.8
CPNE4-213ENST00000515418 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
CPNE4-213ENST00000515418 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
CPNE4-213ENST00000515418 TNP1P09430 55 aa3.71□□□□□ -1.82
CPNE4-213ENST00000515418 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
CPNE4-213ENST00000515418 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
CPNE4-213ENST00000515418 KMT2DO14686 5537 aa3.68□□□□□ -1.82
CPNE4-213ENST00000515418 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms