RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
RNF4-220ENST00000513578 PRR4Q16378 134 aa4.5□□□□□ -1.69
RNF4-220ENST00000513578 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
RNF4-220ENST00000513578 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
RNF4-220ENST00000513578 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
RNF4-220ENST00000513578 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
RNF4-220ENST00000513578 ACYP2P14621 99 aa4.46□□□□□ -1.7
RNF4-220ENST00000513578 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
RNF4-220ENST00000513578 COA5Q86WW8 74 aa4.46□□□□□ -1.7
RNF4-220ENST00000513578 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
RNF4-220ENST00000513578 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
RNF4-220ENST00000513578 A8MUN3 132 aa4.44□□□□□ -1.7
RNF4-220ENST00000513578 SPINK7P58062 85 aa4.43□□□□□ -1.7
RNF4-220ENST00000513578 Q1T7F1 81 aa4.43□□□□□ -1.7
RNF4-220ENST00000513578 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
RNF4-220ENST00000513578 V9GYY9 64 aa4.42□□□□□ -1.7
RNF4-220ENST00000513578 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
RNF4-220ENST00000513578 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
RNF4-220ENST00000513578 COX6B2Q6YFQ2 88 aa4.36□□□□□ -1.71
RNF4-220ENST00000513578 MPLKIPQ8TAP9 179 aa4.36□□□□□ -1.71
RNF4-220ENST00000513578 CHKB-CPT1BH3BT56 60 aa4.35□□□□□ -1.71
RNF4-220ENST00000513578 KRTAP3-1Q9BYR8 98 aa4.35□□□□□ -1.71
RNF4-220ENST00000513578 LINC01558Q9Y6Z2 57 aa4.35□□□□□ -1.71
RNF4-220ENST00000513578 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
RNF4-220ENST00000513578 LRP2P98164 4655 aa4.33□□□□□ -1.72
RNF4-220ENST00000513578 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
RNF4-220ENST00000513578 SEC61BP60468 96 aaKnown RBP4.3□□□□□ -1.72
RNF4-220ENST00000513578 SPTSSBQ8NFR3 76 aa4.3□□□□□ -1.72
RNF4-220ENST00000513578 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
RNF4-220ENST00000513578 MUC17Q685J3 4493 aa4.28□□□□□ -1.72
RNF4-220ENST00000513578 Q5VV11 94 aa4.27□□□□□ -1.73
RNF4-220ENST00000513578 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
RNF4-220ENST00000513578 PSPHP1O15172 72 aa4.26□□□□□ -1.73
RNF4-220ENST00000513578 LPAP08519 4548 aa4.24□□□□□ -1.73
RNF4-220ENST00000513578 A0A1B0GU69 56 aa4.22□□□□□ -1.73
RNF4-220ENST00000513578 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
RNF4-220ENST00000513578 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
RNF4-220ENST00000513578 S4R3F8 94 aa4.19□□□□□ -1.74
RNF4-220ENST00000513578 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
RNF4-220ENST00000513578 SEC61GP60059 68 aa4.17□□□□□ -1.74
RNF4-220ENST00000513578 LCA10Q71F78 164 aa4.17□□□□□ -1.74
RNF4-220ENST00000513578 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
RNF4-220ENST00000513578 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
RNF4-220ENST00000513578 A6NED7 52 aa4.15□□□□□ -1.75
RNF4-220ENST00000513578 BRK1Q8WUW1 75 aa4.15□□□□□ -1.75
RNF4-220ENST00000513578 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
RNF4-220ENST00000513578 UQCR11O14957 56 aa4.12□□□□□ -1.75
RNF4-220ENST00000513578 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
RNF4-220ENST00000513578 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
RNF4-220ENST00000513578 SPATA8Q6RVD6 105 aa4.11□□□□□ -1.75
RNF4-220ENST00000513578 CSAG1Q6PB30 78 aa4.1□□□□□ -1.75
RNF4-220ENST00000513578 H0YAA0 97 aa4.08□□□□□ -1.76
RNF4-220ENST00000513578 A0A1B0GU33 70 aa4.07□□□□□ -1.76
RNF4-220ENST00000513578 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
RNF4-220ENST00000513578 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
RNF4-220ENST00000513578 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
RNF4-220ENST00000513578 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
RNF4-220ENST00000513578 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
RNF4-220ENST00000513578 A8MU10 97 aa4.04□□□□□ -1.76
RNF4-220ENST00000513578 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
RNF4-220ENST00000513578 FLGP20930 4061 aaPredicted RBP3.99□□□□□ -1.77
RNF4-220ENST00000513578 ADM2Q7Z4H4 148 aa3.99□□□□□ -1.77
RNF4-220ENST00000513578 P0C880 135 aa3.98□□□□□ -1.77
RNF4-220ENST00000513578 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
RNF4-220ENST00000513578 NEBP20929 6669 aa3.96□□□□□ -1.77
RNF4-220ENST00000513578 M0QZ58 72 aa3.96□□□□□ -1.78
RNF4-220ENST00000513578 A6NN06 94 aa3.95□□□□□ -1.78
RNF4-220ENST00000513578 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
RNF4-220ENST00000513578 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
RNF4-220ENST00000513578 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
RNF4-220ENST00000513578 K7ERS5 55 aa3.88□□□□□ -1.79
RNF4-220ENST00000513578 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
RNF4-220ENST00000513578 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
RNF4-220ENST00000513578 MT1HP80294 61 aa3.87□□□□□ -1.79
RNF4-220ENST00000513578 R4GN34 69 aa3.85□□□□□ -1.79
RNF4-220ENST00000513578 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
RNF4-220ENST00000513578 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
RNF4-220ENST00000513578 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
RNF4-220ENST00000513578 A0A0D9SG42 100 aa3.82□□□□□ -1.8
RNF4-220ENST00000513578 KRTAP12-1P59990 96 aa3.81□□□□□ -1.8
RNF4-220ENST00000513578 M0R2T5 61 aa3.78□□□□□ -1.8
RNF4-220ENST00000513578 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
RNF4-220ENST00000513578 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
RNF4-220ENST00000513578 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
RNF4-220ENST00000513578 KRTAP9-8Q9BYQ0 159 aa3.75□□□□□ -1.81
RNF4-220ENST00000513578 MT2AP02795 61 aa3.74□□□□□ -1.81
RNF4-220ENST00000513578 ROMO1P60602 79 aa3.74□□□□□ -1.81
RNF4-220ENST00000513578 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
RNF4-220ENST00000513578 LINC01554Q52M75 96 aa3.72□□□□□ -1.81
RNF4-220ENST00000513578 FCGBPQ9Y6R7 5405 aaPredicted RBP3.71□□□□□ -1.81
RNF4-220ENST00000513578 MT1FP04733 61 aa3.7□□□□□ -1.82
RNF4-220ENST00000513578 USH2AO75445 5202 aa3.69□□□□□ -1.82
RNF4-220ENST00000513578 KRTAP10-10P60014 251 aa3.68□□□□□ -1.82
RNF4-220ENST00000513578 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.83
RNF4-220ENST00000513578 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
RNF4-220ENST00000513578 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
RNF4-220ENST00000513578 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
RNF4-220ENST00000513578 CAMK2N1Q7Z7J9 78 aa3.6□□□□□ -1.83
RNF4-220ENST00000513578 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
RNF4-220ENST00000513578 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms