RNA–Protein interactions for RNA: ENST00000511949.5

SH3TC2-210, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 4

Gene SH3TC2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-210ENST00000511949 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
SH3TC2-210ENST00000511949 SNURFQ9Y675 71 aa6.06□□□□□ -1.44
SH3TC2-210ENST00000511949 PCP4P48539 62 aa6.05□□□□□ -1.44
SH3TC2-210ENST00000511949 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
SH3TC2-210ENST00000511949 S4R3F8 94 aa6.04□□□□□ -1.44
SH3TC2-210ENST00000511949 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
SH3TC2-210ENST00000511949 CCDC179H3BU77 68 aa6.01□□□□□ -1.45
SH3TC2-210ENST00000511949 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
SH3TC2-210ENST00000511949 CSAG1Q6PB30 78 aa5.99□□□□□ -1.45
SH3TC2-210ENST00000511949 SPANXA2-OT1Q8N9U9 137 aa5.98□□□□□ -1.45
SH3TC2-210ENST00000511949 A8MUN3 132 aa5.97□□□□□ -1.45
SH3TC2-210ENST00000511949 MT2AP02795 61 aa5.96□□□□□ -1.46
SH3TC2-210ENST00000511949 H7BZZ5 65 aa5.95□□□□□ -1.46
SH3TC2-210ENST00000511949 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
SH3TC2-210ENST00000511949 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
SH3TC2-210ENST00000511949 TMEM258P61165 79 aa5.92□□□□□ -1.46
SH3TC2-210ENST00000511949 LCA10Q71F78 164 aa5.92□□□□□ -1.46
SH3TC2-210ENST00000511949 MT1FP04733 61 aa5.9□□□□□ -1.46
SH3TC2-210ENST00000511949 ACYP2P14621 99 aa5.9□□□□□ -1.46
SH3TC2-210ENST00000511949 DMAC1Q96GE9 116 aa5.89□□□□□ -1.47
SH3TC2-210ENST00000511949 CYSTM1Q9H1C7 97 aa5.88□□□□□ -1.47
SH3TC2-210ENST00000511949 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
SH3TC2-210ENST00000511949 CHKB-CPT1BH3BT56 60 aa5.81□□□□□ -1.48
SH3TC2-210ENST00000511949 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
SH3TC2-210ENST00000511949 COA5Q86WW8 74 aa5.75□□□□□ -1.49
SH3TC2-210ENST00000511949 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
SH3TC2-210ENST00000511949 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
SH3TC2-210ENST00000511949 H0YAA0 97 aa5.73□□□□□ -1.49
SH3TC2-210ENST00000511949 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
SH3TC2-210ENST00000511949 USH2AO75445 5202 aa5.7□□□□□ -1.5
SH3TC2-210ENST00000511949 ADM2Q7Z4H4 148 aa5.68□□□□□ -1.5
SH3TC2-210ENST00000511949 RPS28P62857 69 aaKnown RBP5.66□□□□□ -1.5
SH3TC2-210ENST00000511949 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.5
SH3TC2-210ENST00000511949 Q5VV11 94 aa5.63□□□□□ -1.51
SH3TC2-210ENST00000511949 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
SH3TC2-210ENST00000511949 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
SH3TC2-210ENST00000511949 SEC61GP60059 68 aa5.6□□□□□ -1.51
SH3TC2-210ENST00000511949 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
SH3TC2-210ENST00000511949 R4GN34 69 aa5.59□□□□□ -1.51
SH3TC2-210ENST00000511949 SMIM26A0A096LP01 95 aa5.57□□□□□ -1.52
SH3TC2-210ENST00000511949 V9GYY9 64 aa5.57□□□□□ -1.52
SH3TC2-210ENST00000511949 KRTAP19-6Q3LI70 58 aa5.55□□□□□ -1.52
SH3TC2-210ENST00000511949 PRR15LQ9BU68 103 aa5.54□□□□□ -1.52
SH3TC2-210ENST00000511949 KRTAP4-8Q9BYQ9 185 aa5.53□□□□□ -1.52
SH3TC2-210ENST00000511949 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
SH3TC2-210ENST00000511949 M0QZ58 72 aa5.51□□□□□ -1.53
SH3TC2-210ENST00000511949 A0A1B0GU69 56 aa5.5□□□□□ -1.53
SH3TC2-210ENST00000511949 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
SH3TC2-210ENST00000511949 A6NN06 94 aa5.48□□□□□ -1.53
SH3TC2-210ENST00000511949 P0C880 135 aa5.48□□□□□ -1.53
SH3TC2-210ENST00000511949 Q1T7F1 81 aa5.48□□□□□ -1.53
SH3TC2-210ENST00000511949 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
SH3TC2-210ENST00000511949 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
SH3TC2-210ENST00000511949 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
SH3TC2-210ENST00000511949 MT1BP07438 61 aa5.44□□□□□ -1.54
SH3TC2-210ENST00000511949 LINC01554Q52M75 96 aa5.43□□□□□ -1.54
SH3TC2-210ENST00000511949 PRO2289Q9P1D8 64 aa5.41□□□□□ -1.54
SH3TC2-210ENST00000511949 A0A1B0GU33 70 aa5.37□□□□□ -1.55
SH3TC2-210ENST00000511949 PSPHP1O15172 72 aa5.35□□□□□ -1.55
SH3TC2-210ENST00000511949 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
SH3TC2-210ENST00000511949 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
SH3TC2-210ENST00000511949 UQCR11O14957 56 aa5.33□□□□□ -1.56
SH3TC2-210ENST00000511949 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
SH3TC2-210ENST00000511949 A6NED7 52 aa5.25□□□□□ -1.57
SH3TC2-210ENST00000511949 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
SH3TC2-210ENST00000511949 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
SH3TC2-210ENST00000511949 SPATA8Q6RVD6 105 aa5.2□□□□□ -1.58
SH3TC2-210ENST00000511949 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
SH3TC2-210ENST00000511949 MT1XP80297 61 aa5.17□□□□□ -1.58
SH3TC2-210ENST00000511949 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
SH3TC2-210ENST00000511949 A0A0D9SG42 100 aa5.16□□□□□ -1.58
SH3TC2-210ENST00000511949 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
SH3TC2-210ENST00000511949 NEBP20929 6669 aa5.14□□□□□ -1.59
SH3TC2-210ENST00000511949 K7ERS5 55 aa5.14□□□□□ -1.59
SH3TC2-210ENST00000511949 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
SH3TC2-210ENST00000511949 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
SH3TC2-210ENST00000511949 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
SH3TC2-210ENST00000511949 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
SH3TC2-210ENST00000511949 H3BS24 57 aa5.11□□□□□ -1.59
SH3TC2-210ENST00000511949 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
SH3TC2-210ENST00000511949 A8MU10 97 aa5.08□□□□□ -1.6
SH3TC2-210ENST00000511949 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
SH3TC2-210ENST00000511949 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
SH3TC2-210ENST00000511949 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
SH3TC2-210ENST00000511949 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
SH3TC2-210ENST00000511949 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
SH3TC2-210ENST00000511949 KMT2DO14686 5537 aa4.97□□□□□ -1.61
SH3TC2-210ENST00000511949 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
SH3TC2-210ENST00000511949 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
SH3TC2-210ENST00000511949 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
SH3TC2-210ENST00000511949 KRTAP10-7P60409 375 aaPredicted RBP4.95□□□□□ -1.62
SH3TC2-210ENST00000511949 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
SH3TC2-210ENST00000511949 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
SH3TC2-210ENST00000511949 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
SH3TC2-210ENST00000511949 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
SH3TC2-210ENST00000511949 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
SH3TC2-210ENST00000511949 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
SH3TC2-210ENST00000511949 TNP1P09430 55 aa4.83□□□□□ -1.64
SH3TC2-210ENST00000511949 SPRR2EP22531 72 aa4.83□□□□□ -1.64
SH3TC2-210ENST00000511949 SPRR2BP35325 72 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms