RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
NR1I3-227ENST00000510951 TRAV7A0A075B6U4 112 aa5.05□□□□□ -1.6
NR1I3-227ENST00000510951 SMIM20Q8N5G0 67 aa5.05□□□□□ -1.6
NR1I3-227ENST00000510951 H3BPC8 53 aa5.04□□□□□ -1.6
NR1I3-227ENST00000510951 S4R3F8 94 aa5.02□□□□□ -1.61
NR1I3-227ENST00000510951 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
NR1I3-227ENST00000510951 LCA10Q71F78 164 aa4.99□□□□□ -1.61
NR1I3-227ENST00000510951 MT2AP02795 61 aa4.98□□□□□ -1.61
NR1I3-227ENST00000510951 SERP2Q8N6R1 65 aa4.98□□□□□ -1.61
NR1I3-227ENST00000510951 SNURFQ9Y675 71 aa4.97□□□□□ -1.61
NR1I3-227ENST00000510951 MT1FP04733 61 aa4.95□□□□□ -1.62
NR1I3-227ENST00000510951 A8MUN3 132 aa4.94□□□□□ -1.62
NR1I3-227ENST00000510951 C20orf197Q8N268 126 aa4.94□□□□□ -1.62
NR1I3-227ENST00000510951 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
NR1I3-227ENST00000510951 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
NR1I3-227ENST00000510951 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
NR1I3-227ENST00000510951 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
NR1I3-227ENST00000510951 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
NR1I3-227ENST00000510951 COX7CP15954 63 aa4.89□□□□□ -1.63
NR1I3-227ENST00000510951 NDUFC1O43677 76 aa4.88□□□□□ -1.63
NR1I3-227ENST00000510951 ANAPC13Q9BS18 74 aa4.87□□□□□ -1.63
NR1I3-227ENST00000510951 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
NR1I3-227ENST00000510951 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
NR1I3-227ENST00000510951 ACYP2P14621 99 aa4.82□□□□□ -1.64
NR1I3-227ENST00000510951 CYSTM1Q9H1C7 97 aa4.82□□□□□ -1.64
NR1I3-227ENST00000510951 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
NR1I3-227ENST00000510951 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
NR1I3-227ENST00000510951 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
NR1I3-227ENST00000510951 CHKB-CPT1BH3BT56 60 aa4.77□□□□□ -1.65
NR1I3-227ENST00000510951 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
NR1I3-227ENST00000510951 H7BZZ5 65 aa4.77□□□□□ -1.65
NR1I3-227ENST00000510951 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
NR1I3-227ENST00000510951 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
NR1I3-227ENST00000510951 H0YAA0 97 aa4.74□□□□□ -1.65
NR1I3-227ENST00000510951 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
NR1I3-227ENST00000510951 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
NR1I3-227ENST00000510951 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
NR1I3-227ENST00000510951 COA5Q86WW8 74 aa4.71□□□□□ -1.66
NR1I3-227ENST00000510951 P0C880 135 aa4.68□□□□□ -1.66
NR1I3-227ENST00000510951 USH2AO75445 5202 aa4.68□□□□□ -1.66
NR1I3-227ENST00000510951 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
NR1I3-227ENST00000510951 CRIPTQ9P021 101 aa4.66□□□□□ -1.66
NR1I3-227ENST00000510951 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
NR1I3-227ENST00000510951 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
NR1I3-227ENST00000510951 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
NR1I3-227ENST00000510951 Q5VV11 94 aa4.61□□□□□ -1.67
NR1I3-227ENST00000510951 M0QZ58 72 aa4.6□□□□□ -1.67
NR1I3-227ENST00000510951 ATP5EP56381 51 aaPredicted RBP4.6□□□□□ -1.67
NR1I3-227ENST00000510951 R4GN34 69 aa4.6□□□□□ -1.67
NR1I3-227ENST00000510951 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
NR1I3-227ENST00000510951 MT1BP07438 61 aa4.59□□□□□ -1.67
NR1I3-227ENST00000510951 TMEM258P61165 79 aa4.58□□□□□ -1.68
NR1I3-227ENST00000510951 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
NR1I3-227ENST00000510951 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
NR1I3-227ENST00000510951 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
NR1I3-227ENST00000510951 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
NR1I3-227ENST00000510951 SEC61GP60059 68 aa4.51□□□□□ -1.69
NR1I3-227ENST00000510951 SERP1Q9Y6X1 66 aa4.5□□□□□ -1.69
NR1I3-227ENST00000510951 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
NR1I3-227ENST00000510951 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
NR1I3-227ENST00000510951 A0A1B0GU69 56 aa4.46□□□□□ -1.7
NR1I3-227ENST00000510951 A6NN06 94 aa4.46□□□□□ -1.7
NR1I3-227ENST00000510951 PCP4P48539 62 aa4.46□□□□□ -1.7
NR1I3-227ENST00000510951 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
NR1I3-227ENST00000510951 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
NR1I3-227ENST00000510951 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
NR1I3-227ENST00000510951 A0A1B0GU33 70 aa4.41□□□□□ -1.7
NR1I3-227ENST00000510951 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
NR1I3-227ENST00000510951 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
NR1I3-227ENST00000510951 A0A0D9SG42 100 aa4.38□□□□□ -1.71
NR1I3-227ENST00000510951 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
NR1I3-227ENST00000510951 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
NR1I3-227ENST00000510951 MT1XP80297 61 aa4.37□□□□□ -1.71
NR1I3-227ENST00000510951 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
NR1I3-227ENST00000510951 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
NR1I3-227ENST00000510951 A8MU10 97 aa4.29□□□□□ -1.72
NR1I3-227ENST00000510951 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
NR1I3-227ENST00000510951 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
NR1I3-227ENST00000510951 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
NR1I3-227ENST00000510951 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
NR1I3-227ENST00000510951 PSPHP1O15172 72 aa4.26□□□□□ -1.73
NR1I3-227ENST00000510951 KRTAP12-1P59990 96 aa4.26□□□□□ -1.73
NR1I3-227ENST00000510951 V9GYY9 64 aa4.26□□□□□ -1.73
NR1I3-227ENST00000510951 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
NR1I3-227ENST00000510951 Q1T7F1 81 aa4.24□□□□□ -1.73
NR1I3-227ENST00000510951 UQCR11O14957 56 aa4.23□□□□□ -1.73
NR1I3-227ENST00000510951 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
NR1I3-227ENST00000510951 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
NR1I3-227ENST00000510951 SYNE2Q8WXH0 6885 aaKnown RBP4.19□□□□□ -1.74
NR1I3-227ENST00000510951 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
NR1I3-227ENST00000510951 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
NR1I3-227ENST00000510951 A6NED7 52 aa4.12□□□□□ -1.75
NR1I3-227ENST00000510951 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
NR1I3-227ENST00000510951 KMT2DO14686 5537 aa4.1□□□□□ -1.75
NR1I3-227ENST00000510951 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
NR1I3-227ENST00000510951 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
NR1I3-227ENST00000510951 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
NR1I3-227ENST00000510951 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
NR1I3-227ENST00000510951 K7ERS5 55 aa4.04□□□□□ -1.76
NR1I3-227ENST00000510951 TNP1P09430 55 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms