RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 LORP23490 312 aaPredicted RBP9.72□□□□□ -0.85
USP53-203ENST00000507597 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
USP53-203ENST00000507597 NDUFC1O43677 76 aa9.69□□□□□ -0.86
USP53-203ENST00000507597 DMAC1Q96GE9 116 aa9.69□□□□□ -0.86
USP53-203ENST00000507597 ACYP2P14621 99 aa9.67□□□□□ -0.86
USP53-203ENST00000507597 LCA10Q71F78 164 aa9.67□□□□□ -0.86
USP53-203ENST00000507597 SPANXA2-OT1Q8N9U9 137 aa9.67□□□□□ -0.86
USP53-203ENST00000507597 KRTAP9-8Q9BYQ0 159 aa9.56□□□□□ -0.88
USP53-203ENST00000507597 FSIP2Q5CZC0 6907 aa9.56□□□□□ -0.88
USP53-203ENST00000507597 CRCT1Q9UGL9 99 aa9.55□□□□□ -0.88
USP53-203ENST00000507597 SPTSSBQ8NFR3 76 aa9.52□□□□□ -0.89
USP53-203ENST00000507597 CHKB-CPT1BH3BT56 60 aa9.51□□□□□ -0.89
USP53-203ENST00000507597 KRTAP10-10P60014 251 aa9.5□□□□□ -0.89
USP53-203ENST00000507597 H7BZZ5 65 aa9.49□□□□□ -0.89
USP53-203ENST00000507597 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
USP53-203ENST00000507597 MT2AP02795 61 aa9.48□□□□□ -0.89
USP53-203ENST00000507597 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
USP53-203ENST00000507597 CCDC179H3BU77 68 aa9.46□□□□□ -0.9
USP53-203ENST00000507597 H0YAA0 97 aa9.39□□□□□ -0.91
USP53-203ENST00000507597 MT1FP04733 61 aa9.39□□□□□ -0.91
USP53-203ENST00000507597 CYSTM1Q9H1C7 97 aa9.38□□□□□ -0.91
USP53-203ENST00000507597 ATP5EP56381 51 aaPredicted RBP9.36□□□□□ -0.91
USP53-203ENST00000507597 COA5Q86WW8 74 aa9.32□□□□□ -0.92
USP53-203ENST00000507597 TMEM258P61165 79 aa9.26□□□□□ -0.93
USP53-203ENST00000507597 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
USP53-203ENST00000507597 CRIPTQ9P021 101 aa9.26□□□□□ -0.93
USP53-203ENST00000507597 KRTAP9-3Q9BYQ3 159 aa9.24□□□□□ -0.93
USP53-203ENST00000507597 SEC61GP60059 68 aa9.13□□□□□ -0.95
USP53-203ENST00000507597 PCP4P48539 62 aa9.09□□□□□ -0.95
USP53-203ENST00000507597 SERP1Q9Y6X1 66 aa9.07□□□□□ -0.96
USP53-203ENST00000507597 SPRR2GQ9BYE4 73 aa9.06□□□□□ -0.96
USP53-203ENST00000507597 R4GN34 69 aa9.06□□□□□ -0.96
USP53-203ENST00000507597 P0C880 135 aa9.05□□□□□ -0.96
USP53-203ENST00000507597 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
USP53-203ENST00000507597 M0QZ58 72 aa8.96□□□□□ -0.98
USP53-203ENST00000507597 Q5VV11 94 aa8.95□□□□□ -0.98
USP53-203ENST00000507597 KRTAP9-7A8MTY7 169 aa8.91□□□□□ -0.98
USP53-203ENST00000507597 KRTAP19-8Q3LI54 63 aa8.91□□□□□ -0.98
USP53-203ENST00000507597 A0A1B0GU69 56 aa8.9□□□□□ -0.98
USP53-203ENST00000507597 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.9□□□□□ -0.98
USP53-203ENST00000507597 PRR15LQ9BU68 103 aa8.88□□□□□ -0.99
USP53-203ENST00000507597 USH2AO75445 5202 aa8.85□□□□□ -0.99
USP53-203ENST00000507597 SSPOA2VEC9 5147 aa8.8□□□□□ -1
USP53-203ENST00000507597 A0A1B0GU33 70 aa8.8□□□□□ -1
USP53-203ENST00000507597 LINC01558Q9Y6Z2 57 aa8.8□□□□□ -1
USP53-203ENST00000507597 LINC01554Q52M75 96 aa8.79□□□□□ -1
USP53-203ENST00000507597 PLAC4Q8WY50 150 aa8.78□□□□□ -1
USP53-203ENST00000507597 MT1BP07438 61 aa8.76□□□□□ -1.01
USP53-203ENST00000507597 V9GYY9 64 aa8.76□□□□□ -1.01
USP53-203ENST00000507597 KRTAP19-6Q3LI70 58 aa8.72□□□□□ -1.01
USP53-203ENST00000507597 RPS28P62857 69 aaKnown RBP8.7□□□□□ -1.02
USP53-203ENST00000507597 SMIM26A0A096LP01 95 aa8.67□□□□□ -1.02
USP53-203ENST00000507597 A6NN06 94 aa8.66□□□□□ -1.02
USP53-203ENST00000507597 FCGBPQ9Y6R7 5405 aaPredicted RBP8.64□□□□□ -1.03
USP53-203ENST00000507597 KRTAP13-4Q3LI77 160 aa8.62□□□□□ -1.03
USP53-203ENST00000507597 Q1T7F1 81 aa8.61□□□□□ -1.03
USP53-203ENST00000507597 KRTAP4-8Q9BYQ9 185 aa8.6□□□□□ -1.03
USP53-203ENST00000507597 SPATA8Q6RVD6 105 aa8.58□□□□□ -1.04
USP53-203ENST00000507597 PRO2289Q9P1D8 64 aa8.58□□□□□ -1.04
USP53-203ENST00000507597 UQCR11O14957 56 aa8.55□□□□□ -1.04
USP53-203ENST00000507597 A0A0D9SG42 100 aa8.53□□□□□ -1.04
USP53-203ENST00000507597 KRTAP10-5P60370 271 aa8.52□□□□□ -1.05
USP53-203ENST00000507597 MACF1Q9UPN3 7388 aaKnown RBP8.48□□□□□ -1.05
USP53-203ENST00000507597 SYNE2Q8WXH0 6885 aaKnown RBP8.46□□□□□ -1.05
USP53-203ENST00000507597 PSPHP1O15172 72 aa8.45□□□□□ -1.06
USP53-203ENST00000507597 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
USP53-203ENST00000507597 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
USP53-203ENST00000507597 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
USP53-203ENST00000507597 A8MU10 97 aa8.35□□□□□ -1.07
USP53-203ENST00000507597 MT1XP80297 61 aa8.35□□□□□ -1.07
USP53-203ENST00000507597 KRTAP12-1P59990 96 aa8.33□□□□□ -1.08
USP53-203ENST00000507597 A6NED7 52 aa8.28□□□□□ -1.08
USP53-203ENST00000507597 KRTAP12-2P59991 146 aa8.26□□□□□ -1.09
USP53-203ENST00000507597 K7ERS5 55 aa8.25□□□□□ -1.09
USP53-203ENST00000507597 KRTAP6-3Q3LI67 103 aa8.19□□□□□ -1.1
USP53-203ENST00000507597 LCE3BQ5TA77 95 aa8.18□□□□□ -1.1
USP53-203ENST00000507597 KRTAP4-12Q9BQ66 201 aa8.13□□□□□ -1.11
USP53-203ENST00000507597 KRTAP9-9Q9BYP9 154 aa8.04□□□□□ -1.12
USP53-203ENST00000507597 KRTAP9-4Q9BYQ2 154 aa8.04□□□□□ -1.12
USP53-203ENST00000507597 CDC42SE1Q9NRR8 79 aa8.02□□□□□ -1.13
USP53-203ENST00000507597 NEBP20929 6669 aa7.99□□□□□ -1.13
USP53-203ENST00000507597 KRTAP10-7P60409 375 aaPredicted RBP7.98□□□□□ -1.13
USP53-203ENST00000507597 KRTAP10-12P60413 245 aa7.98□□□□□ -1.13
USP53-203ENST00000507597 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
USP53-203ENST00000507597 TNP1P09430 55 aa7.92□□□□□ -1.14
USP53-203ENST00000507597 KRTAP8-1Q8IUC2 63 aa7.89□□□□□ -1.15
USP53-203ENST00000507597 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
USP53-203ENST00000507597 MUC12Q9UKN1 5478 aa7.85□□□□□ -1.15
USP53-203ENST00000507597 KRTAP20-1Q3LI63 56 aa7.79□□□□□ -1.16
USP53-203ENST00000507597 KRTAP5-9P26371 169 aa7.77□□□□□ -1.17
USP53-203ENST00000507597 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
USP53-203ENST00000507597 BRK1Q8WUW1 75 aa7.72□□□□□ -1.17
USP53-203ENST00000507597 SPRR2FQ96RM1 72 aa7.71□□□□□ -1.18
USP53-203ENST00000507597 KMT2DO14686 5537 aa7.71□□□□□ -1.18
USP53-203ENST00000507597 KRTAP4-7Q9BYR0 210 aa7.69□□□□□ -1.18
USP53-203ENST00000507597 ROMO1P60602 79 aa7.66□□□□□ -1.18
USP53-203ENST00000507597 LCE1DQ5T752 114 aa7.64□□□□□ -1.19
USP53-203ENST00000507597 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
USP53-203ENST00000507597 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
USP53-203ENST00000507597 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms