RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 DMAC1Q96GE9 116 aa9.79□□□□□ -0.84
SMIM20-201ENST00000506197 CCDC179H3BU77 68 aa9.78□□□□□ -0.84
SMIM20-201ENST00000506197 SPANXA2-OT1Q8N9U9 137 aa9.77□□□□□ -0.85
SMIM20-201ENST00000506197 LCA10Q71F78 164 aa9.72□□□□□ -0.85
SMIM20-201ENST00000506197 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
SMIM20-201ENST00000506197 H7BZZ5 65 aa9.71□□□□□ -0.86
SMIM20-201ENST00000506197 ACYP2P14621 99 aa9.7□□□□□ -0.86
SMIM20-201ENST00000506197 CSAG1Q6PB30 78 aa9.64□□□□□ -0.87
SMIM20-201ENST00000506197 KRTAP9-8Q9BYQ0 159 aa9.61□□□□□ -0.87
SMIM20-201ENST00000506197 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
SMIM20-201ENST00000506197 CHKB-CPT1BH3BT56 60 aa9.56□□□□□ -0.88
SMIM20-201ENST00000506197 KRTAP3-2Q9BYR7 98 aa9.54□□□□□ -0.88
SMIM20-201ENST00000506197 USH2AO75445 5202 aa9.53□□□□□ -0.88
SMIM20-201ENST00000506197 ATP5EP56381 51 aaPredicted RBP9.5□□□□□ -0.89
SMIM20-201ENST00000506197 MT2AP02795 61 aa9.49□□□□□ -0.89
SMIM20-201ENST00000506197 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
SMIM20-201ENST00000506197 PCP4P48539 62 aa9.47□□□□□ -0.89
SMIM20-201ENST00000506197 TMEM258P61165 79 aa9.47□□□□□ -0.89
SMIM20-201ENST00000506197 COA5Q86WW8 74 aa9.47□□□□□ -0.89
SMIM20-201ENST00000506197 SSPOA2VEC9 5147 aa9.45□□□□□ -0.9
SMIM20-201ENST00000506197 MT1FP04733 61 aa9.42□□□□□ -0.9
SMIM20-201ENST00000506197 KRTAP10-10P60014 251 aa9.4□□□□□ -0.9
SMIM20-201ENST00000506197 H0YAA0 97 aa9.34□□□□□ -0.91
SMIM20-201ENST00000506197 KRTAP9-3Q9BYQ3 159 aa9.32□□□□□ -0.92
SMIM20-201ENST00000506197 LCE2BO14633 110 aa9.31□□□□□ -0.92
SMIM20-201ENST00000506197 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
SMIM20-201ENST00000506197 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.29□□□□□ -0.92
SMIM20-201ENST00000506197 FCGBPQ9Y6R7 5405 aaPredicted RBP9.26□□□□□ -0.93
SMIM20-201ENST00000506197 KRTAP19-1Q8IUB9 90 aa9.22□□□□□ -0.93
SMIM20-201ENST00000506197 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
SMIM20-201ENST00000506197 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
SMIM20-201ENST00000506197 CRIPTQ9P021 101 aa9.15□□□□□ -0.94
SMIM20-201ENST00000506197 P0C880 135 aa9.13□□□□□ -0.95
SMIM20-201ENST00000506197 SEC61GP60059 68 aa9.12□□□□□ -0.95
SMIM20-201ENST00000506197 SPRR2GQ9BYE4 73 aa9.02□□□□□ -0.97
SMIM20-201ENST00000506197 R4GN34 69 aa9.02□□□□□ -0.97
SMIM20-201ENST00000506197 KRTAP19-6Q3LI70 58 aa9.01□□□□□ -0.97
SMIM20-201ENST00000506197 A0A1B0GU69 56 aa9□□□□□ -0.97
SMIM20-201ENST00000506197 M0QZ58 72 aa8.98□□□□□ -0.97
SMIM20-201ENST00000506197 MACF1Q9UPN3 7388 aaKnown RBP8.98□□□□□ -0.97
SMIM20-201ENST00000506197 PRR15LQ9BU68 103 aa8.94□□□□□ -0.98
SMIM20-201ENST00000506197 LINC01558Q9Y6Z2 57 aa8.93□□□□□ -0.98
SMIM20-201ENST00000506197 SYNE2Q8WXH0 6885 aaKnown RBP8.92□□□□□ -0.98
SMIM20-201ENST00000506197 RPS28P62857 69 aaKnown RBP8.9□□□□□ -0.98
SMIM20-201ENST00000506197 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
SMIM20-201ENST00000506197 A0A1B0GU33 70 aa8.86□□□□□ -0.99
SMIM20-201ENST00000506197 Q5VV11 94 aa8.86□□□□□ -0.99
SMIM20-201ENST00000506197 KRTAP19-8Q3LI54 63 aa8.85□□□□□ -0.99
SMIM20-201ENST00000506197 V9GYY9 64 aa8.85□□□□□ -0.99
SMIM20-201ENST00000506197 LINC01554Q52M75 96 aa8.83□□□□□ -1
SMIM20-201ENST00000506197 Q1T7F1 81 aa8.79□□□□□ -1
SMIM20-201ENST00000506197 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
SMIM20-201ENST00000506197 MT1BP07438 61 aa8.76□□□□□ -1.01
SMIM20-201ENST00000506197 SPATA8Q6RVD6 105 aa8.72□□□□□ -1.01
SMIM20-201ENST00000506197 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
SMIM20-201ENST00000506197 PSPHP1O15172 72 aa8.68□□□□□ -1.02
SMIM20-201ENST00000506197 A0A0D9SG42 100 aa8.63□□□□□ -1.03
SMIM20-201ENST00000506197 UQCR11O14957 56 aa8.63□□□□□ -1.03
SMIM20-201ENST00000506197 KRTAP6-3Q3LI67 103 aa8.63□□□□□ -1.03
SMIM20-201ENST00000506197 A6NN06 94 aa8.62□□□□□ -1.03
SMIM20-201ENST00000506197 A8MU10 97 aa8.52□□□□□ -1.05
SMIM20-201ENST00000506197 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
SMIM20-201ENST00000506197 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
SMIM20-201ENST00000506197 A6NED7 52 aa8.45□□□□□ -1.06
SMIM20-201ENST00000506197 KRTAP10-5P60370 271 aa8.45□□□□□ -1.06
SMIM20-201ENST00000506197 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
SMIM20-201ENST00000506197 PRO2289Q9P1D8 64 aa8.44□□□□□ -1.06
SMIM20-201ENST00000506197 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
SMIM20-201ENST00000506197 NEBP20929 6669 aa8.41□□□□□ -1.06
SMIM20-201ENST00000506197 KRTAP12-2P59991 146 aa8.38□□□□□ -1.07
SMIM20-201ENST00000506197 MT1XP80297 61 aa8.37□□□□□ -1.07
SMIM20-201ENST00000506197 MUC12Q9UKN1 5478 aa8.37□□□□□ -1.07
SMIM20-201ENST00000506197 K7ERS5 55 aa8.25□□□□□ -1.09
SMIM20-201ENST00000506197 KRTAP5-9P26371 169 aa8.2□□□□□ -1.1
SMIM20-201ENST00000506197 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
SMIM20-201ENST00000506197 KMT2DO14686 5537 aa8.17□□□□□ -1.1
SMIM20-201ENST00000506197 MDN1Q9NU22 5596 aa8.16□□□□□ -1.1
SMIM20-201ENST00000506197 KRTAP20-1Q3LI63 56 aa8.08□□□□□ -1.12
SMIM20-201ENST00000506197 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
SMIM20-201ENST00000506197 C10orf95Q9H7T3 257 aa8□□□□□ -1.13
SMIM20-201ENST00000506197 BRK1Q8WUW1 75 aa7.98□□□□□ -1.13
SMIM20-201ENST00000506197 KRTAP10-12P60413 245 aa7.96□□□□□ -1.14
SMIM20-201ENST00000506197 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
SMIM20-201ENST00000506197 TNP1P09430 55 aa7.91□□□□□ -1.14
SMIM20-201ENST00000506197 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
SMIM20-201ENST00000506197 SPRR2EP22531 72 aa7.86□□□□□ -1.15
SMIM20-201ENST00000506197 SPRR2BP35325 72 aa7.86□□□□□ -1.15
SMIM20-201ENST00000506197 SPRR2AP35326 72 aa7.86□□□□□ -1.15
SMIM20-201ENST00000506197 KRTAP2-3P0C7H8 128 aa7.81□□□□□ -1.16
SMIM20-201ENST00000506197 KRTAP2-4Q9BYR9 128 aa7.81□□□□□ -1.16
SMIM20-201ENST00000506197 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
SMIM20-201ENST00000506197 KRTAP4-8Q9BYQ9 185 aa7.8□□□□□ -1.16
SMIM20-201ENST00000506197 ROMO1P60602 79 aa7.78□□□□□ -1.16
SMIM20-201ENST00000506197 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
SMIM20-201ENST00000506197 LCE1AQ5T7P2 110 aa7.71□□□□□ -1.18
SMIM20-201ENST00000506197 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
SMIM20-201ENST00000506197 SPRR2DP22532 72 aa7.6□□□□□ -1.19
SMIM20-201ENST00000506197 KRTAP2-2Q9BYT5 123 aa7.55□□□□□ -1.2
SMIM20-201ENST00000506197 KRTAP2-1Q9BYU5 128 aa7.55□□□□□ -1.2
SMIM20-201ENST00000506197 PMAIP1Q13794 54 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms