RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 C5orf47Q569G3 176 aa2.66□□□□□ -1.98
DEPDC1B-203ENST00000505017 MRPL34Q9BQ48 92 aaKnown RBP2.66□□□□□ -1.98
DEPDC1B-203ENST00000505017 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.99
DEPDC1B-203ENST00000505017 CCDC179H3BU77 68 aa2.65□□□□□ -1.99
DEPDC1B-203ENST00000505017 NDUFC1O43677 76 aa2.65□□□□□ -1.99
DEPDC1B-203ENST00000505017 KLKP1Q107X0 134 aa2.65□□□□□ -1.99
DEPDC1B-203ENST00000505017 FP248Q71RG6 208 aaPredicted RBP2.65□□□□□ -1.99
DEPDC1B-203ENST00000505017 TNXBP22105 4242 aa2.65□□□□□ -1.99
DEPDC1B-203ENST00000505017 MP68P56378 58 aa2.64□□□□□ -1.99
DEPDC1B-203ENST00000505017 DMBT1Q9UGM3 2413 aaPredicted RBP2.64□□□□□ -1.99
DEPDC1B-203ENST00000505017 TRAV22A0A0B4J277 110 aa2.63□□□□□ -1.99
DEPDC1B-203ENST00000505017 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
DEPDC1B-203ENST00000505017 C20orf197Q8N268 126 aa2.63□□□□□ -1.99
DEPDC1B-203ENST00000505017 KIAA1109Q2LD37 5005 aa2.62□□□□□ -1.99
DEPDC1B-203ENST00000505017 A0A0U1RQV1 116 aa2.62□□□□□ -1.99
DEPDC1B-203ENST00000505017 H0Y9P7 68 aa2.62□□□□□ -1.99
DEPDC1B-203ENST00000505017 NDUFS5O43920 106 aa2.62□□□□□ -1.99
DEPDC1B-203ENST00000505017 MT1HL1P0DM35 61 aa2.62□□□□□ -1.99
DEPDC1B-203ENST00000505017 LRP1Q07954 4544 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-203ENST00000505017 EPPK1P58107 5090 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-203ENST00000505017 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
DEPDC1B-203ENST00000505017 TMEM258P61165 79 aa2.61□□□□□ -1.99
DEPDC1B-203ENST00000505017 ZCCHC13Q8WW36 166 aaKnown RBP2.61□□□□□ -1.99
DEPDC1B-203ENST00000505017 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
DEPDC1B-203ENST00000505017 LOC101927531A0A1B0GV80 90 aa2.6□□□□□ -1.99
DEPDC1B-203ENST00000505017 C20orf166-AS1Q96NR2 134 aa2.6□□□□□ -1.99
DEPDC1B-203ENST00000505017 A8MUU9 505 aa2.59□□□□□ -1.99
DEPDC1B-203ENST00000505017 H7BZZ5 65 aa2.59□□□□□ -1.99
DEPDC1B-203ENST00000505017 C1orf64Q8NEQ6 169 aa2.59□□□□□ -1.99
DEPDC1B-203ENST00000505017 LINC00208Q96KT6 92 aa2.59□□□□□ -1.99
DEPDC1B-203ENST00000505017 SNURFQ9Y675 71 aa2.59□□□□□ -1.99
DEPDC1B-203ENST00000505017 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
DEPDC1B-203ENST00000505017 MYCBP2O75592 4640 aa2.57□□□□□ -2
DEPDC1B-203ENST00000505017 HERC2O95714 4834 aa2.57□□□□□ -2
DEPDC1B-203ENST00000505017 RETNLBQ9BQ08 111 aa2.57□□□□□ -2
DEPDC1B-203ENST00000505017 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
DEPDC1B-203ENST00000505017 FAM236DA0A1B0GTK5 79 aa2.56□□□□□ -2
DEPDC1B-203ENST00000505017 FAM236CP0DP71 79 aa2.56□□□□□ -2
DEPDC1B-203ENST00000505017 TPRXLQ17RH7 258 aa2.56□□□□□ -2
DEPDC1B-203ENST00000505017 C9orf92A6NGG3 77 aa2.55□□□□□ -2
DEPDC1B-203ENST00000505017 Q5W150 140 aa2.55□□□□□ -2
DEPDC1B-203ENST00000505017 CYP4F30PQ9H0H9 118 aa2.55□□□□□ -2
DEPDC1B-203ENST00000505017 RPS28P62857 69 aaKnown RBP2.54□□□□□ -2
DEPDC1B-203ENST00000505017 PRR4Q16378 134 aa2.54□□□□□ -2
DEPDC1B-203ENST00000505017 C7orf65Q6ZTY9 151 aa2.54□□□□□ -2
DEPDC1B-203ENST00000505017 RPL37P61927 97 aaKnown RBP2.53□□□□□ -2
DEPDC1B-203ENST00000505017 ATP11AUNQ6ZP68 121 aa2.53□□□□□ -2
DEPDC1B-203ENST00000505017 SERP1Q9Y6X1 66 aa2.53□□□□□ -2
DEPDC1B-203ENST00000505017 PCOTHQ58A44 107 aa2.51□□□□□ -2.01
DEPDC1B-203ENST00000505017 A8MUN3 132 aa2.5□□□□□ -2.01
DEPDC1B-203ENST00000505017 HRES1P13985 223 aa2.49□□□□□ -2.01
DEPDC1B-203ENST00000505017 DMAC1Q96GE9 116 aa2.49□□□□□ -2.01
DEPDC1B-203ENST00000505017 ABCA13Q86UQ4 5058 aa2.48□□□□□ -2.01
DEPDC1B-203ENST00000505017 ACYP2P14621 99 aa2.48□□□□□ -2.01
DEPDC1B-203ENST00000505017 SPINK7P58062 85 aa2.48□□□□□ -2.01
DEPDC1B-203ENST00000505017 SMIM26A0A096LP01 95 aa2.47□□□□□ -2.01
DEPDC1B-203ENST00000505017 COA5Q86WW8 74 aa2.46□□□□□ -2.02
DEPDC1B-203ENST00000505017 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
DEPDC1B-203ENST00000505017 COX6B2Q6YFQ2 88 aa2.45□□□□□ -2.02
DEPDC1B-203ENST00000505017 V9GYY9 64 aa2.44□□□□□ -2.02
DEPDC1B-203ENST00000505017 CHKB-CPT1BH3BT56 60 aa2.43□□□□□ -2.02
DEPDC1B-203ENST00000505017 C4orf26Q17RF5 130 aa2.43□□□□□ -2.02
DEPDC1B-203ENST00000505017 LRP2P98164 4655 aa2.42□□□□□ -2.02
DEPDC1B-203ENST00000505017 SPTSSBQ8NFR3 76 aa2.42□□□□□ -2.02
DEPDC1B-203ENST00000505017 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
DEPDC1B-203ENST00000505017 Q1T7F1 81 aa2.41□□□□□ -2.02
DEPDC1B-203ENST00000505017 RBM12B-AS1Q9P1G2 102 aa2.41□□□□□ -2.02
DEPDC1B-203ENST00000505017 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
DEPDC1B-203ENST00000505017 LPAP08519 4548 aa2.39□□□□□ -2.03
DEPDC1B-203ENST00000505017 HERC1Q15751 4861 aa2.38□□□□□ -2.03
DEPDC1B-203ENST00000505017 H1FX-AS1Q4G0G2 97 aa2.38□□□□□ -2.03
DEPDC1B-203ENST00000505017 LINC01558Q9Y6Z2 57 aa2.38□□□□□ -2.03
DEPDC1B-203ENST00000505017 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
DEPDC1B-203ENST00000505017 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
DEPDC1B-203ENST00000505017 S4R3F8 94 aa2.36□□□□□ -2.03
DEPDC1B-203ENST00000505017 HMCN2Q8NDA2 5059 aa2.36□□□□□ -2.03
DEPDC1B-203ENST00000505017 SEC61GP60059 68 aa2.34□□□□□ -2.03
DEPDC1B-203ENST00000505017 A0A1B0GU69 56 aa2.33□□□□□ -2.04
DEPDC1B-203ENST00000505017 LCA10Q71F78 164 aa2.33□□□□□ -2.04
DEPDC1B-203ENST00000505017 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
DEPDC1B-203ENST00000505017 Q5VV11 94 aa2.32□□□□□ -2.04
DEPDC1B-203ENST00000505017 CSAG1Q6PB30 78 aa2.32□□□□□ -2.04
DEPDC1B-203ENST00000505017 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
DEPDC1B-203ENST00000505017 PSPHP1O15172 72 aa2.31□□□□□ -2.04
DEPDC1B-203ENST00000505017 H0YAA0 97 aa2.3□□□□□ -2.04
DEPDC1B-203ENST00000505017 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
DEPDC1B-203ENST00000505017 A6NED7 52 aa2.28□□□□□ -2.04
DEPDC1B-203ENST00000505017 UQCR11O14957 56 aa2.28□□□□□ -2.04
DEPDC1B-203ENST00000505017 CDC42SE1Q9NRR8 79 aa2.26□□□□□ -2.05
DEPDC1B-203ENST00000505017 A0A1B0GU33 70 aa2.25□□□□□ -2.05
DEPDC1B-203ENST00000505017 SPATA8Q6RVD6 105 aa2.25□□□□□ -2.05
DEPDC1B-203ENST00000505017 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
DEPDC1B-203ENST00000505017 PRO0628Q9UI54 55 aa2.24□□□□□ -2.05
DEPDC1B-203ENST00000505017 M0QZ58 72 aa2.23□□□□□ -2.05
DEPDC1B-203ENST00000505017 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
DEPDC1B-203ENST00000505017 ADM2Q7Z4H4 148 aa2.23□□□□□ -2.05
DEPDC1B-203ENST00000505017 P0C880 135 aa2.21□□□□□ -2.06
DEPDC1B-203ENST00000505017 CAMK2N1Q7Z7J9 78 aa2.21□□□□□ -2.06
DEPDC1B-203ENST00000505017 CRIPTQ9P021 101 aa2.21□□□□□ -2.06
DEPDC1B-203ENST00000505017 MT1HP80294 61 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms