RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 AEBP2Q6ZN18 517 aaPredicted RBP32.03■■■□□ 2.72
DEPDC1B-203ENST00000505017 CHIC1Q5VXU3 224 aa30.61■■■□□ 2.49
DEPDC1B-203ENST00000505017 SENP3Q9H4L4 574 aaPredicted RBP27.04■■□□□ 1.92
DEPDC1B-203ENST00000505017 PHF23Q9BUL5 403 aaPredicted RBP26.99■■□□□ 1.91
DEPDC1B-203ENST00000505017 FOXD1Q16676 465 aa25.31■■□□□ 1.64
DEPDC1B-203ENST00000505017 PLPPR3Q6T4P5 718 aa24.52■■□□□ 1.52
DEPDC1B-203ENST00000505017 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
DEPDC1B-203ENST00000505017 ADRA2BP18089 450 aa23.88■■□□□ 1.41
DEPDC1B-203ENST00000505017 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
DEPDC1B-203ENST00000505017 MSH5O43196 834 aa23.38■■□□□ 1.33
DEPDC1B-203ENST00000505017 POTEDQ86YR6 584 aa22.4■■□□□ 1.18
DEPDC1B-203ENST00000505017 MAPK8IP2Q13387 824 aaPredicted RBP21.88■■□□□ 1.09
DEPDC1B-203ENST00000505017 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
DEPDC1B-203ENST00000505017 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
DEPDC1B-203ENST00000505017 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
DEPDC1B-203ENST00000505017 CNKSR2Q8WXI2 1034 aa21.06■□□□□ 0.96
DEPDC1B-203ENST00000505017 HOXD11P31277 338 aaPredicted RBP20.92■□□□□ 0.94
DEPDC1B-203ENST00000505017 RNF216Q9NWF9 866 aaPredicted RBP20.81■□□□□ 0.92
DEPDC1B-203ENST00000505017 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
DEPDC1B-203ENST00000505017 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
DEPDC1B-203ENST00000505017 DCAF8L1A6NGE4 600 aa20.55■□□□□ 0.88
DEPDC1B-203ENST00000505017 KCNA4P22459 653 aa20.55■□□□□ 0.88
DEPDC1B-203ENST00000505017 RNF39Q9H2S5 420 aa20.1■□□□□ 0.81
DEPDC1B-203ENST00000505017 DNAJC5BQ9UF47 199 aa20.07■□□□□ 0.8
DEPDC1B-203ENST00000505017 CACNB1Q02641 598 aaPredicted RBP19.87■□□□□ 0.77
DEPDC1B-203ENST00000505017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.767e-9■■□□□ 11.4
DEPDC1B-203ENST00000505017 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
DEPDC1B-203ENST00000505017 SLC4A2P04920 1241 aa19.67■□□□□ 0.74
DEPDC1B-203ENST00000505017 U3KPZ7 1027 aaPredicted RBP19.59■□□□□ 0.73
DEPDC1B-203ENST00000505017 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
DEPDC1B-203ENST00000505017 SPINK5Q9NQ38 1064 aaPredicted RBP19.22■□□□□ 0.67
DEPDC1B-203ENST00000505017 CAPN15O75808 1086 aa19.02■□□□□ 0.64
DEPDC1B-203ENST00000505017 ZBTB22O15209 634 aa18.99■□□□□ 0.63
DEPDC1B-203ENST00000505017 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
DEPDC1B-203ENST00000505017 DSG3P32926 999 aa18.95■□□□□ 0.62
DEPDC1B-203ENST00000505017 MYCNP04198 464 aaPredicted RBP18.94■□□□□ 0.62
DEPDC1B-203ENST00000505017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
DEPDC1B-203ENST00000505017 HNRNPUL2Q1KMD3 747 aaKnown RBP18.91■□□□□ 0.62
DEPDC1B-203ENST00000505017 SAMD1Q6SPF0 538 aaPredicted RBP18.88■□□□□ 0.61
DEPDC1B-203ENST00000505017 TRHP20396 242 aaPredicted RBP18.83■□□□□ 0.6
DEPDC1B-203ENST00000505017 APLP2Q06481 763 aa18.78■□□□□ 0.6
DEPDC1B-203ENST00000505017 ZNF219Q9P2Y4 722 aaPredicted RBP18.74■□□□□ 0.59
DEPDC1B-203ENST00000505017 ABCB7O75027 752 aa18.69■□□□□ 0.58
DEPDC1B-203ENST00000505017 ATF5Q9Y2D1 282 aaPredicted RBP18.69■□□□□ 0.58
DEPDC1B-203ENST00000505017 POLA2Q14181 598 aa18.44■□□□□ 0.54
DEPDC1B-203ENST00000505017 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
DEPDC1B-203ENST00000505017 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
DEPDC1B-203ENST00000505017 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
DEPDC1B-203ENST00000505017 ZBTB12Q9Y330 459 aaPredicted RBP17.93■□□□□ 0.46
DEPDC1B-203ENST00000505017 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
DEPDC1B-203ENST00000505017 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
DEPDC1B-203ENST00000505017 MKRN4PQ13434 485 aaPredicted RBP17.82■□□□□ 0.44
DEPDC1B-203ENST00000505017 FBLN2P98095 1184 aa17.66■□□□□ 0.42
DEPDC1B-203ENST00000505017 AKT1S1Q96B36 256 aa17.62■□□□□ 0.41
DEPDC1B-203ENST00000505017 POTEHQ6S545 545 aa17.56■□□□□ 0.4
DEPDC1B-203ENST00000505017 REM2Q8IYK8 340 aaPredicted RBP17.53■□□□□ 0.4
DEPDC1B-203ENST00000505017 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
DEPDC1B-203ENST00000505017 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
DEPDC1B-203ENST00000505017 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
DEPDC1B-203ENST00000505017 CHRDL2Q6WN34 429 aa17.48■□□□□ 0.39
DEPDC1B-203ENST00000505017 SSUH2Q9Y2M2 353 aa17.39■□□□□ 0.37
DEPDC1B-203ENST00000505017 PITPNM1O00562 1244 aa17.35■□□□□ 0.37
DEPDC1B-203ENST00000505017 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
DEPDC1B-203ENST00000505017 PIP4P2Q8N4L2 257 aa17.18■□□□□ 0.34
DEPDC1B-203ENST00000505017 FXR2P51116 673 aaKnown RBP eCLIP17.14■□□□□ 0.33
DEPDC1B-203ENST00000505017 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
DEPDC1B-203ENST00000505017 SPDYE1Q8NFV5 336 aaPredicted RBP17.08■□□□□ 0.32
DEPDC1B-203ENST00000505017 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
DEPDC1B-203ENST00000505017 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
DEPDC1B-203ENST00000505017 PRKAR2AP13861 404 aaKnown RBP16.85■□□□□ 0.29
DEPDC1B-203ENST00000505017 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
DEPDC1B-203ENST00000505017 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
DEPDC1B-203ENST00000505017 PROM2Q8N271 834 aa16.76■□□□□ 0.27
DEPDC1B-203ENST00000505017 EVX2Q03828 476 aa16.73■□□□□ 0.27
DEPDC1B-203ENST00000505017 HAX1O00165 279 aa16.69■□□□□ 0.26
DEPDC1B-203ENST00000505017 SP7Q8TDD2 431 aaPredicted RBP16.61■□□□□ 0.25
DEPDC1B-203ENST00000505017 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
DEPDC1B-203ENST00000505017 CREBZFQ9NS37 354 aa16.6■□□□□ 0.25
DEPDC1B-203ENST00000505017 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
DEPDC1B-203ENST00000505017 FARP1Q9Y4F1 1045 aaPredicted RBP16.54■□□□□ 0.24
DEPDC1B-203ENST00000505017 FKBP8Q14318 412 aa16.53■□□□□ 0.24
DEPDC1B-203ENST00000505017 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
DEPDC1B-203ENST00000505017 CD44P16070 742 aaKnown RBP16.33■□□□□ 0.2
DEPDC1B-203ENST00000505017 GABBR2O75899 941 aa16.24■□□□□ 0.19
DEPDC1B-203ENST00000505017 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
DEPDC1B-203ENST00000505017 MIER1Q8N108 512 aa16.14■□□□□ 0.17
DEPDC1B-203ENST00000505017 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
DEPDC1B-203ENST00000505017 NPM1P06748 294 aaKnown RBP eCLIP16.11■□□□□ 0.17
DEPDC1B-203ENST00000505017 PHF12Q96QT6 1004 aa16.03■□□□□ 0.16
DEPDC1B-203ENST00000505017 PLCD3Q8N3E9 789 aa16.02■□□□□ 0.16
DEPDC1B-203ENST00000505017 POTEIP0CG38 1075 aa16■□□□□ 0.15
DEPDC1B-203ENST00000505017 RASEFQ8IZ41 740 aa15.97■□□□□ 0.15
DEPDC1B-203ENST00000505017 GALR2O43603 387 aaPredicted RBP15.96■□□□□ 0.15
DEPDC1B-203ENST00000505017 TSPYL2Q9H2G4 693 aaPredicted RBP15.95■□□□□ 0.14
DEPDC1B-203ENST00000505017 FBXO3Q9UK99 471 aa15.95■□□□□ 0.14
DEPDC1B-203ENST00000505017 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
DEPDC1B-203ENST00000505017 PLEKHG5O94827 1062 aa15.93■□□□□ 0.14
DEPDC1B-203ENST00000505017 CCDC61Q9Y6R9 512 aa15.93■□□□□ 0.14
DEPDC1B-203ENST00000505017 CLCN6P51797 869 aa15.91■□□□□ 0.14
DEPDC1B-203ENST00000505017 NUBP1P53384 320 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms