RNA–Protein interactions for RNA: ENST00000504208.5

KLHL3-204, Transcript of kelch like family member 3, humanhuman

TSL 2

Gene KLHL3, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-204ENST00000504208 C9orf92A6NGG3 77 aa5.16□□□□□ -1.58
KLHL3-204ENST00000504208 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
KLHL3-204ENST00000504208 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
KLHL3-204ENST00000504208 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
KLHL3-204ENST00000504208 PSPHP1O15172 72 aa5.12□□□□□ -1.59
KLHL3-204ENST00000504208 HMCN2Q8NDA2 5059 aa5.11□□□□□ -1.59
KLHL3-204ENST00000504208 Q5VV11 94 aa5.11□□□□□ -1.59
KLHL3-204ENST00000504208 ATP11AUNQ6ZP68 121 aa5.1□□□□□ -1.59
KLHL3-204ENST00000504208 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
KLHL3-204ENST00000504208 SPINK7P58062 85 aa5.09□□□□□ -1.59
KLHL3-204ENST00000504208 RPL37P61927 97 aaKnown RBP5.08□□□□□ -1.6
KLHL3-204ENST00000504208 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
KLHL3-204ENST00000504208 SPTSSBQ8NFR3 76 aa5.08□□□□□ -1.6
KLHL3-204ENST00000504208 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
KLHL3-204ENST00000504208 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
KLHL3-204ENST00000504208 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
KLHL3-204ENST00000504208 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
KLHL3-204ENST00000504208 LCE2CQ5TA81 110 aa5.02□□□□□ -1.61
KLHL3-204ENST00000504208 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
KLHL3-204ENST00000504208 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
KLHL3-204ENST00000504208 A0A1B0GU69 56 aa5□□□□□ -1.61
KLHL3-204ENST00000504208 KRTAP23-1A1A580 65 aa5□□□□□ -1.61
KLHL3-204ENST00000504208 A6NED7 52 aa4.99□□□□□ -1.61
KLHL3-204ENST00000504208 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
KLHL3-204ENST00000504208 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
KLHL3-204ENST00000504208 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
KLHL3-204ENST00000504208 LORP23490 312 aaPredicted RBP4.95□□□□□ -1.62
KLHL3-204ENST00000504208 LCA10Q71F78 164 aa4.94□□□□□ -1.62
KLHL3-204ENST00000504208 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
KLHL3-204ENST00000504208 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
KLHL3-204ENST00000504208 LPAP08519 4548 aa4.93□□□□□ -1.62
KLHL3-204ENST00000504208 UQCR11O14957 56 aa4.92□□□□□ -1.62
KLHL3-204ENST00000504208 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
KLHL3-204ENST00000504208 LRP2P98164 4655 aa4.9□□□□□ -1.63
KLHL3-204ENST00000504208 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
KLHL3-204ENST00000504208 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
KLHL3-204ENST00000504208 KTN1-AS1Q86SY8 53 aa4.85□□□□□ -1.63
KLHL3-204ENST00000504208 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
KLHL3-204ENST00000504208 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
KLHL3-204ENST00000504208 A8MU10 97 aa4.83□□□□□ -1.64
KLHL3-204ENST00000504208 S4R3F8 94 aa4.82□□□□□ -1.64
KLHL3-204ENST00000504208 A0A1B0GU33 70 aa4.8□□□□□ -1.64
KLHL3-204ENST00000504208 A6NN06 94 aa4.78□□□□□ -1.64
KLHL3-204ENST00000504208 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
KLHL3-204ENST00000504208 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
KLHL3-204ENST00000504208 CSAG1Q6PB30 78 aa4.74□□□□□ -1.65
KLHL3-204ENST00000504208 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
KLHL3-204ENST00000504208 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
KLHL3-204ENST00000504208 H0YAA0 97 aa4.71□□□□□ -1.66
KLHL3-204ENST00000504208 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
KLHL3-204ENST00000504208 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
KLHL3-204ENST00000504208 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
KLHL3-204ENST00000504208 MUC2Q02817 5179 aa4.67□□□□□ -1.66
KLHL3-204ENST00000504208 K7ERS5 55 aa4.65□□□□□ -1.66
KLHL3-204ENST00000504208 M0QZ58 72 aa4.61□□□□□ -1.67
KLHL3-204ENST00000504208 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
KLHL3-204ENST00000504208 ADM2Q7Z4H4 148 aa4.61□□□□□ -1.67
KLHL3-204ENST00000504208 P0C880 135 aa4.6□□□□□ -1.67
KLHL3-204ENST00000504208 KRTAP19-2Q3LHN2 52 aa4.58□□□□□ -1.68
KLHL3-204ENST00000504208 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
KLHL3-204ENST00000504208 LINC01554Q52M75 96 aa4.57□□□□□ -1.68
KLHL3-204ENST00000504208 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
KLHL3-204ENST00000504208 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
KLHL3-204ENST00000504208 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
KLHL3-204ENST00000504208 A0A0D9SG42 100 aa4.48□□□□□ -1.69
KLHL3-204ENST00000504208 R4GN34 69 aa4.47□□□□□ -1.69
KLHL3-204ENST00000504208 MT1HP80294 61 aa4.46□□□□□ -1.7
KLHL3-204ENST00000504208 ROMO1P60602 79 aa4.45□□□□□ -1.7
KLHL3-204ENST00000504208 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
KLHL3-204ENST00000504208 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
KLHL3-204ENST00000504208 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
KLHL3-204ENST00000504208 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
KLHL3-204ENST00000504208 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
KLHL3-204ENST00000504208 M0R2T5 61 aa4.4□□□□□ -1.7
KLHL3-204ENST00000504208 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
KLHL3-204ENST00000504208 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
KLHL3-204ENST00000504208 MT2AP02795 61 aa4.24□□□□□ -1.73
KLHL3-204ENST00000504208 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
KLHL3-204ENST00000504208 MT1FP04733 61 aa4.22□□□□□ -1.73
KLHL3-204ENST00000504208 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
KLHL3-204ENST00000504208 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
KLHL3-204ENST00000504208 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
KLHL3-204ENST00000504208 C10orf95Q9H7T3 257 aa4.18□□□□□ -1.74
KLHL3-204ENST00000504208 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.74
KLHL3-204ENST00000504208 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
KLHL3-204ENST00000504208 PP632Q6XCG6 107 aa4.13□□□□□ -1.75
KLHL3-204ENST00000504208 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
KLHL3-204ENST00000504208 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
KLHL3-204ENST00000504208 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
KLHL3-204ENST00000504208 TNP1P09430 55 aa4.06□□□□□ -1.76
KLHL3-204ENST00000504208 USH2AO75445 5202 aa4.02□□□□□ -1.77
KLHL3-204ENST00000504208 LCE5AQ5TCM9 118 aa4□□□□□ -1.77
KLHL3-204ENST00000504208 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
KLHL3-204ENST00000504208 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
KLHL3-204ENST00000504208 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
KLHL3-204ENST00000504208 MT1BP07438 61 aa3.97□□□□□ -1.77
KLHL3-204ENST00000504208 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
KLHL3-204ENST00000504208 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
KLHL3-204ENST00000504208 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
KLHL3-204ENST00000504208 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms