RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
TOPBP1-202ENST00000503338 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
TOPBP1-202ENST00000503338 RBM12B-AS1Q9P1G2 102 aa4.2□□□□□ -1.74
TOPBP1-202ENST00000503338 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-202ENST00000503338 MPLKIPQ8TAP9 179 aa4.16□□□□□ -1.74
TOPBP1-202ENST00000503338 CHKB-CPT1BH3BT56 60 aa4.15□□□□□ -1.75
TOPBP1-202ENST00000503338 COA5Q86WW8 74 aa4.15□□□□□ -1.75
TOPBP1-202ENST00000503338 LPAP08519 4548 aa4.14□□□□□ -1.75
TOPBP1-202ENST00000503338 SPTSSBQ8NFR3 76 aa4.13□□□□□ -1.75
TOPBP1-202ENST00000503338 LRP2P98164 4655 aa4.13□□□□□ -1.75
TOPBP1-202ENST00000503338 H1FX-AS1Q4G0G2 97 aa4.12□□□□□ -1.75
TOPBP1-202ENST00000503338 KRTAP3-1Q9BYR8 98 aa4.12□□□□□ -1.75
TOPBP1-202ENST00000503338 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
TOPBP1-202ENST00000503338 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
TOPBP1-202ENST00000503338 KRTAP4-1Q9BYQ7 146 aa4.1□□□□□ -1.75
TOPBP1-202ENST00000503338 SMIM26A0A096LP01 95 aa4.09□□□□□ -1.75
TOPBP1-202ENST00000503338 HERC1Q15751 4861 aa4.09□□□□□ -1.76
TOPBP1-202ENST00000503338 S4R3F8 94 aa4.07□□□□□ -1.76
TOPBP1-202ENST00000503338 V9GYY9 64 aa4.07□□□□□ -1.76
TOPBP1-202ENST00000503338 MUC17Q685J3 4493 aa4.06□□□□□ -1.76
TOPBP1-202ENST00000503338 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
TOPBP1-202ENST00000503338 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
TOPBP1-202ENST00000503338 Q1T7F1 81 aa4.02□□□□□ -1.77
TOPBP1-202ENST00000503338 LCA10Q71F78 164 aa4.02□□□□□ -1.77
TOPBP1-202ENST00000503338 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
TOPBP1-202ENST00000503338 KRTAP19-2Q3LHN2 52 aa4□□□□□ -1.77
TOPBP1-202ENST00000503338 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
TOPBP1-202ENST00000503338 SEC61GP60059 68 aa3.99□□□□□ -1.77
TOPBP1-202ENST00000503338 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
TOPBP1-202ENST00000503338 A0A1B0GU69 56 aa3.96□□□□□ -1.78
TOPBP1-202ENST00000503338 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
TOPBP1-202ENST00000503338 H0YAA0 97 aa3.94□□□□□ -1.78
TOPBP1-202ENST00000503338 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
TOPBP1-202ENST00000503338 PSPHP1O15172 72 aa3.9□□□□□ -1.79
TOPBP1-202ENST00000503338 M0R2T5 61 aa3.88□□□□□ -1.79
TOPBP1-202ENST00000503338 MT1HP80294 61 aa3.88□□□□□ -1.79
TOPBP1-202ENST00000503338 Q5VV11 94 aa3.88□□□□□ -1.79
TOPBP1-202ENST00000503338 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
TOPBP1-202ENST00000503338 MUC2Q02817 5179 aa3.87□□□□□ -1.79
TOPBP1-202ENST00000503338 UBR4Q5T4S7 5183 aa3.87□□□□□ -1.79
TOPBP1-202ENST00000503338 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-202ENST00000503338 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
TOPBP1-202ENST00000503338 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
TOPBP1-202ENST00000503338 UQCR11O14957 56 aa3.85□□□□□ -1.79
TOPBP1-202ENST00000503338 A0A1B0GU33 70 aa3.84□□□□□ -1.79
TOPBP1-202ENST00000503338 KRTAP10-6P60371 365 aaPredicted RBP3.83□□□□□ -1.8
TOPBP1-202ENST00000503338 RNF213Q63HN8 5207 aa3.82□□□□□ -1.8
TOPBP1-202ENST00000503338 A6NED7 52 aa3.82□□□□□ -1.8
TOPBP1-202ENST00000503338 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
TOPBP1-202ENST00000503338 M0QZ58 72 aa3.8□□□□□ -1.8
TOPBP1-202ENST00000503338 P0C880 135 aa3.8□□□□□ -1.8
TOPBP1-202ENST00000503338 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
TOPBP1-202ENST00000503338 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
TOPBP1-202ENST00000503338 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
TOPBP1-202ENST00000503338 R4GN34 69 aa3.77□□□□□ -1.81
TOPBP1-202ENST00000503338 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
TOPBP1-202ENST00000503338 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
TOPBP1-202ENST00000503338 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
TOPBP1-202ENST00000503338 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
TOPBP1-202ENST00000503338 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
TOPBP1-202ENST00000503338 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
TOPBP1-202ENST00000503338 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
TOPBP1-202ENST00000503338 MT2AP02795 61 aa3.71□□□□□ -1.82
TOPBP1-202ENST00000503338 KRTAP10-10P60014 251 aa3.71□□□□□ -1.82
TOPBP1-202ENST00000503338 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
TOPBP1-202ENST00000503338 K7ERS5 55 aa3.68□□□□□ -1.82
TOPBP1-202ENST00000503338 MT1FP04733 61 aa3.68□□□□□ -1.82
TOPBP1-202ENST00000503338 A6NN06 94 aa3.66□□□□□ -1.82
TOPBP1-202ENST00000503338 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
TOPBP1-202ENST00000503338 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
TOPBP1-202ENST00000503338 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
TOPBP1-202ENST00000503338 A0A0D9SG42 100 aa3.65□□□□□ -1.83
TOPBP1-202ENST00000503338 A8MU10 97 aa3.64□□□□□ -1.83
TOPBP1-202ENST00000503338 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
TOPBP1-202ENST00000503338 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
TOPBP1-202ENST00000503338 KRTAP12-1P59990 96 aa3.59□□□□□ -1.83
TOPBP1-202ENST00000503338 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
TOPBP1-202ENST00000503338 KRTAP19-8Q3LI54 63 aa3.57□□□□□ -1.84
TOPBP1-202ENST00000503338 PLAC4Q8WY50 150 aa3.57□□□□□ -1.84
TOPBP1-202ENST00000503338 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
TOPBP1-202ENST00000503338 LCE5AQ5TCM9 118 aa3.56□□□□□ -1.84
TOPBP1-202ENST00000503338 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
TOPBP1-202ENST00000503338 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
TOPBP1-202ENST00000503338 MT1BP07438 61 aa3.48□□□□□ -1.85
TOPBP1-202ENST00000503338 ROMO1P60602 79 aa3.46□□□□□ -1.86
TOPBP1-202ENST00000503338 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
TOPBP1-202ENST00000503338 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
TOPBP1-202ENST00000503338 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
TOPBP1-202ENST00000503338 C10orf95Q9H7T3 257 aa3.38□□□□□ -1.87
TOPBP1-202ENST00000503338 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
TOPBP1-202ENST00000503338 TNP1P09430 55 aa3.36□□□□□ -1.87
TOPBP1-202ENST00000503338 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
TOPBP1-202ENST00000503338 MT1XP80297 61 aa3.36□□□□□ -1.87
TOPBP1-202ENST00000503338 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
TOPBP1-202ENST00000503338 KRTAP19-6Q3LI70 58 aa3.33□□□□□ -1.88
TOPBP1-202ENST00000503338 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
TOPBP1-202ENST00000503338 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
TOPBP1-202ENST00000503338 USH2AO75445 5202 aa3.25□□□□□ -1.89
TOPBP1-202ENST00000503338 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
TOPBP1-202ENST00000503338 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 846.5 ms