RNA–Protein interactions for RNA: ENST00000499601.2

AC008393.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008393.1, Length 1,454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008393.1-201ENST00000499601 SERP1Q9Y6X1 66 aa9.38□□□□□ -0.91
AC008393.1-201ENST00000499601 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
AC008393.1-201ENST00000499601 RPS28P62857 69 aaKnown RBP9.34□□□□□ -0.91
AC008393.1-201ENST00000499601 A8MUN3 132 aa9.27□□□□□ -0.93
AC008393.1-201ENST00000499601 KRTAP19-2Q3LHN2 52 aa9.25□□□□□ -0.93
AC008393.1-201ENST00000499601 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
AC008393.1-201ENST00000499601 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
AC008393.1-201ENST00000499601 H1FX-AS1Q4G0G2 97 aa9.22□□□□□ -0.93
AC008393.1-201ENST00000499601 ACYP2P14621 99 aa9.2□□□□□ -0.94
AC008393.1-201ENST00000499601 COA5Q86WW8 74 aa9.19□□□□□ -0.94
AC008393.1-201ENST00000499601 KRTAP4-8Q9BYQ9 185 aa9.15□□□□□ -0.95
AC008393.1-201ENST00000499601 SMIM26A0A096LP01 95 aa9.13□□□□□ -0.95
AC008393.1-201ENST00000499601 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
AC008393.1-201ENST00000499601 S4R3F8 94 aa9.08□□□□□ -0.96
AC008393.1-201ENST00000499601 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
AC008393.1-201ENST00000499601 LCA10Q71F78 164 aa9.02□□□□□ -0.96
AC008393.1-201ENST00000499601 MT1HP80294 61 aa9.02□□□□□ -0.97
AC008393.1-201ENST00000499601 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
AC008393.1-201ENST00000499601 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.96□□□□□ -0.97
AC008393.1-201ENST00000499601 M0R2T5 61 aa8.95□□□□□ -0.98
AC008393.1-201ENST00000499601 V9GYY9 64 aa8.95□□□□□ -0.98
AC008393.1-201ENST00000499601 Q1T7F1 81 aa8.93□□□□□ -0.98
AC008393.1-201ENST00000499601 CSAG1Q6PB30 78 aa8.93□□□□□ -0.98
AC008393.1-201ENST00000499601 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
AC008393.1-201ENST00000499601 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
AC008393.1-201ENST00000499601 LINC01558Q9Y6Z2 57 aa8.83□□□□□ -1
AC008393.1-201ENST00000499601 PRR15LQ9BU68 103 aa8.77□□□□□ -1
AC008393.1-201ENST00000499601 PSPHP1O15172 72 aa8.77□□□□□ -1.01
AC008393.1-201ENST00000499601 KRTAP10-6P60371 365 aaPredicted RBP8.74□□□□□ -1.01
AC008393.1-201ENST00000499601 H0YAA0 97 aa8.71□□□□□ -1.01
AC008393.1-201ENST00000499601 LCE3BQ5TA77 95 aa8.71□□□□□ -1.01
AC008393.1-201ENST00000499601 A0A1B0GU69 56 aa8.7□□□□□ -1.02
AC008393.1-201ENST00000499601 Q5VV11 94 aa8.68□□□□□ -1.02
AC008393.1-201ENST00000499601 SEC61GP60059 68 aa8.67□□□□□ -1.02
AC008393.1-201ENST00000499601 KRTAP9-8Q9BYQ0 159 aa8.64□□□□□ -1.03
AC008393.1-201ENST00000499601 KRTAP4-12Q9BQ66 201 aa8.63□□□□□ -1.03
AC008393.1-201ENST00000499601 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
AC008393.1-201ENST00000499601 MT2AP02795 61 aa8.59□□□□□ -1.03
AC008393.1-201ENST00000499601 A6NED7 52 aa8.53□□□□□ -1.04
AC008393.1-201ENST00000499601 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
AC008393.1-201ENST00000499601 MT1FP04733 61 aa8.52□□□□□ -1.05
AC008393.1-201ENST00000499601 KRTAP9-9Q9BYP9 154 aa8.51□□□□□ -1.05
AC008393.1-201ENST00000499601 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
AC008393.1-201ENST00000499601 P0C880 135 aa8.51□□□□□ -1.05
AC008393.1-201ENST00000499601 KRTAP9-7A8MTY7 169 aa8.47□□□□□ -1.05
AC008393.1-201ENST00000499601 BRK1Q8WUW1 75 aa8.46□□□□□ -1.05
AC008393.1-201ENST00000499601 KRTAP4-8A0A0G2JLE6 195 aa8.45□□□□□ -1.06
AC008393.1-201ENST00000499601 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
AC008393.1-201ENST00000499601 UQCR11O14957 56 aa8.45□□□□□ -1.06
AC008393.1-201ENST00000499601 A0A1B0GU33 70 aa8.41□□□□□ -1.06
AC008393.1-201ENST00000499601 KRTAP19-1Q8IUB9 90 aa8.38□□□□□ -1.07
AC008393.1-201ENST00000499601 CDC42SE1Q9NRR8 79 aa8.37□□□□□ -1.07
AC008393.1-201ENST00000499601 R4GN34 69 aa8.37□□□□□ -1.07
AC008393.1-201ENST00000499601 MIR22HGQ0VDD5 57 aa8.36□□□□□ -1.07
AC008393.1-201ENST00000499601 KRTAP9-3Q9BYQ3 159 aa8.34□□□□□ -1.07
AC008393.1-201ENST00000499601 M0QZ58 72 aa8.33□□□□□ -1.08
AC008393.1-201ENST00000499601 SPATA8Q6RVD6 105 aa8.32□□□□□ -1.08
AC008393.1-201ENST00000499601 SPRR2GQ9BYE4 73 aa8.3□□□□□ -1.08
AC008393.1-201ENST00000499601 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
AC008393.1-201ENST00000499601 A8MU10 97 aa8.26□□□□□ -1.09
AC008393.1-201ENST00000499601 KRTAP13-4Q3LI77 160 aa8.23□□□□□ -1.09
AC008393.1-201ENST00000499601 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
AC008393.1-201ENST00000499601 LINC01554Q52M75 96 aa8.16□□□□□ -1.1
AC008393.1-201ENST00000499601 LCE1DQ5T752 114 aa8.14□□□□□ -1.11
AC008393.1-201ENST00000499601 KRTAP19-8Q3LI54 63 aa8.12□□□□□ -1.11
AC008393.1-201ENST00000499601 SSPOA2VEC9 5147 aa8.11□□□□□ -1.11
AC008393.1-201ENST00000499601 A0A0D9SG42 100 aa8.07□□□□□ -1.12
AC008393.1-201ENST00000499601 A6NN06 94 aa8.06□□□□□ -1.12
AC008393.1-201ENST00000499601 USH2AO75445 5202 aa8.04□□□□□ -1.12
AC008393.1-201ENST00000499601 K7ERS5 55 aa8.02□□□□□ -1.13
AC008393.1-201ENST00000499601 MT1BP07438 61 aa8.01□□□□□ -1.13
AC008393.1-201ENST00000499601 PLAC4Q8WY50 150 aa8□□□□□ -1.13
AC008393.1-201ENST00000499601 PMAIP1Q13794 54 aa7.99□□□□□ -1.13
AC008393.1-201ENST00000499601 FCGBPQ9Y6R7 5405 aaPredicted RBP7.99□□□□□ -1.13
AC008393.1-201ENST00000499601 SYNE2Q8WXH0 6885 aaKnown RBP7.97□□□□□ -1.13
AC008393.1-201ENST00000499601 KRTAP4-9Q9BYQ8 210 aa7.94□□□□□ -1.14
AC008393.1-201ENST00000499601 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
AC008393.1-201ENST00000499601 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
AC008393.1-201ENST00000499601 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
AC008393.1-201ENST00000499601 MACF1Q9UPN3 7388 aaKnown RBP7.87□□□□□ -1.15
AC008393.1-201ENST00000499601 KRTAP4-2Q9BYR5 136 aa7.82□□□□□ -1.16
AC008393.1-201ENST00000499601 CAMK2N1Q7Z7J9 78 aa7.81□□□□□ -1.16
AC008393.1-201ENST00000499601 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
AC008393.1-201ENST00000499601 PRO2289Q9P1D8 64 aa7.72□□□□□ -1.17
AC008393.1-201ENST00000499601 KRTAP10-5P60370 271 aa7.69□□□□□ -1.18
AC008393.1-201ENST00000499601 MT1XP80297 61 aa7.68□□□□□ -1.18
AC008393.1-201ENST00000499601 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
AC008393.1-201ENST00000499601 ROMO1P60602 79 aa7.65□□□□□ -1.18
AC008393.1-201ENST00000499601 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
AC008393.1-201ENST00000499601 NEBP20929 6669 aa7.61□□□□□ -1.19
AC008393.1-201ENST00000499601 KRTAP4-11Q9BYQ6 195 aa7.6□□□□□ -1.19
AC008393.1-201ENST00000499601 KRTAP6-3Q3LI67 103 aa7.53□□□□□ -1.2
AC008393.1-201ENST00000499601 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
AC008393.1-201ENST00000499601 LCE4AQ5TA78 99 aa7.49□□□□□ -1.21
AC008393.1-201ENST00000499601 PRAC1Q96KF2 57 aa7.47□□□□□ -1.21
AC008393.1-201ENST00000499601 TNP1P09430 55 aa7.38□□□□□ -1.23
AC008393.1-201ENST00000499601 MUC12Q9UKN1 5478 aa7.37□□□□□ -1.23
AC008393.1-201ENST00000499601 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
AC008393.1-201ENST00000499601 KRTAP20-1Q3LI63 56 aa7.36□□□□□ -1.23
AC008393.1-201ENST00000499601 KRTAP25-1Q3LHN0 102 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms