RNA–Protein interactions for RNA: ENST00000498660.1

TUBA4A-210, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-210ENST00000498660 COA5Q86WW8 74 aa4.5□□□□□ -1.69
TUBA4A-210ENST00000498660 CHKB-CPT1BH3BT56 60 aa4.49□□□□□ -1.69
TUBA4A-210ENST00000498660 RPS28P62857 69 aaKnown RBP4.48□□□□□ -1.69
TUBA4A-210ENST00000498660 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
TUBA4A-210ENST00000498660 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
TUBA4A-210ENST00000498660 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
TUBA4A-210ENST00000498660 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
TUBA4A-210ENST00000498660 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
TUBA4A-210ENST00000498660 SPTSSBQ8NFR3 76 aa4.42□□□□□ -1.7
TUBA4A-210ENST00000498660 SMIM26A0A096LP01 95 aa4.41□□□□□ -1.7
TUBA4A-210ENST00000498660 S4R3F8 94 aa4.41□□□□□ -1.7
TUBA4A-210ENST00000498660 LCA10Q71F78 164 aa4.37□□□□□ -1.71
TUBA4A-210ENST00000498660 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
TUBA4A-210ENST00000498660 V9GYY9 64 aa4.36□□□□□ -1.71
TUBA4A-210ENST00000498660 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
TUBA4A-210ENST00000498660 Q1T7F1 81 aa4.33□□□□□ -1.72
TUBA4A-210ENST00000498660 MT1HP80294 61 aa4.31□□□□□ -1.72
TUBA4A-210ENST00000498660 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
TUBA4A-210ENST00000498660 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
TUBA4A-210ENST00000498660 PRR15LQ9BU68 103 aa4.29□□□□□ -1.72
TUBA4A-210ENST00000498660 LORP23490 312 aaPredicted RBP4.28□□□□□ -1.72
TUBA4A-210ENST00000498660 SEC61GP60059 68 aa4.28□□□□□ -1.72
TUBA4A-210ENST00000498660 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
TUBA4A-210ENST00000498660 A0A1B0GU69 56 aa4.27□□□□□ -1.73
TUBA4A-210ENST00000498660 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
TUBA4A-210ENST00000498660 PSPHP1O15172 72 aa4.24□□□□□ -1.73
TUBA4A-210ENST00000498660 USH2AO75445 5202 aa4.23□□□□□ -1.73
TUBA4A-210ENST00000498660 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
TUBA4A-210ENST00000498660 H0YAA0 97 aa4.21□□□□□ -1.74
TUBA4A-210ENST00000498660 M0R2T5 61 aa4.2□□□□□ -1.74
TUBA4A-210ENST00000498660 LCE2BO14633 110 aa4.2□□□□□ -1.74
TUBA4A-210ENST00000498660 Q5VV11 94 aa4.2□□□□□ -1.74
TUBA4A-210ENST00000498660 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
TUBA4A-210ENST00000498660 KRTAP9-7A8MTY7 169 aa4.15□□□□□ -1.75
TUBA4A-210ENST00000498660 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.75
TUBA4A-210ENST00000498660 A6NED7 52 aa4.14□□□□□ -1.75
TUBA4A-210ENST00000498660 UQCR11O14957 56 aa4.14□□□□□ -1.75
TUBA4A-210ENST00000498660 A0A1B0GU33 70 aa4.13□□□□□ -1.75
TUBA4A-210ENST00000498660 P0C880 135 aa4.13□□□□□ -1.75
TUBA4A-210ENST00000498660 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
TUBA4A-210ENST00000498660 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
TUBA4A-210ENST00000498660 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
TUBA4A-210ENST00000498660 M0QZ58 72 aa4.07□□□□□ -1.76
TUBA4A-210ENST00000498660 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
TUBA4A-210ENST00000498660 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
TUBA4A-210ENST00000498660 CRIPTQ9P021 101 aa4.06□□□□□ -1.76
TUBA4A-210ENST00000498660 R4GN34 69 aa4.06□□□□□ -1.76
TUBA4A-210ENST00000498660 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
TUBA4A-210ENST00000498660 SPATA8Q6RVD6 105 aa4.04□□□□□ -1.76
TUBA4A-210ENST00000498660 MT2AP02795 61 aa4.03□□□□□ -1.76
TUBA4A-210ENST00000498660 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
TUBA4A-210ENST00000498660 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
TUBA4A-210ENST00000498660 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
TUBA4A-210ENST00000498660 MT1FP04733 61 aa4□□□□□ -1.77
TUBA4A-210ENST00000498660 A0A0D9SG42 100 aa3.99□□□□□ -1.77
TUBA4A-210ENST00000498660 A8MU10 97 aa3.98□□□□□ -1.77
TUBA4A-210ENST00000498660 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
TUBA4A-210ENST00000498660 LINC01554Q52M75 96 aa3.97□□□□□ -1.77
TUBA4A-210ENST00000498660 K7ERS5 55 aa3.95□□□□□ -1.78
TUBA4A-210ENST00000498660 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
TUBA4A-210ENST00000498660 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
TUBA4A-210ENST00000498660 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
TUBA4A-210ENST00000498660 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
TUBA4A-210ENST00000498660 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
TUBA4A-210ENST00000498660 A6NN06 94 aa3.92□□□□□ -1.78
TUBA4A-210ENST00000498660 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.79
TUBA4A-210ENST00000498660 NEBP20929 6669 aa3.89□□□□□ -1.79
TUBA4A-210ENST00000498660 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
TUBA4A-210ENST00000498660 KRTAP12-2P59991 146 aa3.87□□□□□ -1.79
TUBA4A-210ENST00000498660 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
TUBA4A-210ENST00000498660 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
TUBA4A-210ENST00000498660 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
TUBA4A-210ENST00000498660 PLAC4Q8WY50 150 aa3.83□□□□□ -1.8
TUBA4A-210ENST00000498660 KRTAP6-3Q3LI67 103 aa3.82□□□□□ -1.8
TUBA4A-210ENST00000498660 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
TUBA4A-210ENST00000498660 MT1BP07438 61 aa3.77□□□□□ -1.81
TUBA4A-210ENST00000498660 MUC12Q9UKN1 5478 aa3.76□□□□□ -1.81
TUBA4A-210ENST00000498660 ROMO1P60602 79 aa3.74□□□□□ -1.81
TUBA4A-210ENST00000498660 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
TUBA4A-210ENST00000498660 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
TUBA4A-210ENST00000498660 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
TUBA4A-210ENST00000498660 MT1XP80297 61 aa3.65□□□□□ -1.83
TUBA4A-210ENST00000498660 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
TUBA4A-210ENST00000498660 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
TUBA4A-210ENST00000498660 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
TUBA4A-210ENST00000498660 KMT2DO14686 5537 aa3.63□□□□□ -1.83
TUBA4A-210ENST00000498660 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
TUBA4A-210ENST00000498660 TNP1P09430 55 aa3.61□□□□□ -1.83
TUBA4A-210ENST00000498660 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
TUBA4A-210ENST00000498660 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
TUBA4A-210ENST00000498660 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
TUBA4A-210ENST00000498660 H3BS24 57 aa3.53□□□□□ -1.84
TUBA4A-210ENST00000498660 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
TUBA4A-210ENST00000498660 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
TUBA4A-210ENST00000498660 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
TUBA4A-210ENST00000498660 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
TUBA4A-210ENST00000498660 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
TUBA4A-210ENST00000498660 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
TUBA4A-210ENST00000498660 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
TUBA4A-210ENST00000498660 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms