RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 S4R3F8 94 aa5.6□□□□□ -1.51
CTTN-208ENST00000498223 A8MUN3 132 aa5.58□□□□□ -1.52
CTTN-208ENST00000498223 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
CTTN-208ENST00000498223 LCA10Q71F78 164 aa5.53□□□□□ -1.52
CTTN-208ENST00000498223 DMAC1Q96GE9 116 aa5.52□□□□□ -1.53
CTTN-208ENST00000498223 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
CTTN-208ENST00000498223 NDUFC1O43677 76 aa5.5□□□□□ -1.53
CTTN-208ENST00000498223 ACYP2P14621 99 aa5.5□□□□□ -1.53
CTTN-208ENST00000498223 CCDC179H3BU77 68 aa5.48□□□□□ -1.53
CTTN-208ENST00000498223 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
CTTN-208ENST00000498223 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
CTTN-208ENST00000498223 H7BZZ5 65 aa5.44□□□□□ -1.54
CTTN-208ENST00000498223 CYSTM1Q9H1C7 97 aa5.44□□□□□ -1.54
CTTN-208ENST00000498223 LCE2BO14633 110 aa5.43□□□□□ -1.54
CTTN-208ENST00000498223 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
CTTN-208ENST00000498223 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
CTTN-208ENST00000498223 MT2AP02795 61 aa5.41□□□□□ -1.54
CTTN-208ENST00000498223 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
CTTN-208ENST00000498223 MT1FP04733 61 aa5.37□□□□□ -1.55
CTTN-208ENST00000498223 COA5Q86WW8 74 aa5.34□□□□□ -1.55
CTTN-208ENST00000498223 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
CTTN-208ENST00000498223 USH2AO75445 5202 aa5.32□□□□□ -1.56
CTTN-208ENST00000498223 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
CTTN-208ENST00000498223 TMEM258P61165 79 aa5.29□□□□□ -1.56
CTTN-208ENST00000498223 SSPOA2VEC9 5147 aa5.29□□□□□ -1.56
CTTN-208ENST00000498223 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
CTTN-208ENST00000498223 H0YAA0 97 aa5.28□□□□□ -1.56
CTTN-208ENST00000498223 PCP4P48539 62 aa5.26□□□□□ -1.57
CTTN-208ENST00000498223 KRTAP9-7A8MTY7 169 aa5.25□□□□□ -1.57
CTTN-208ENST00000498223 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
CTTN-208ENST00000498223 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
CTTN-208ENST00000498223 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
CTTN-208ENST00000498223 P0C880 135 aa5.19□□□□□ -1.58
CTTN-208ENST00000498223 SEC61GP60059 68 aa5.19□□□□□ -1.58
CTTN-208ENST00000498223 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
CTTN-208ENST00000498223 SERP1Q9Y6X1 66 aa5.16□□□□□ -1.58
CTTN-208ENST00000498223 R4GN34 69 aa5.15□□□□□ -1.59
CTTN-208ENST00000498223 M0QZ58 72 aa5.13□□□□□ -1.59
CTTN-208ENST00000498223 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
CTTN-208ENST00000498223 A0A1B0GU69 56 aa5.1□□□□□ -1.59
CTTN-208ENST00000498223 KRTAP19-6Q3LI70 58 aa5.08□□□□□ -1.6
CTTN-208ENST00000498223 Q5VV11 94 aa5.08□□□□□ -1.6
CTTN-208ENST00000498223 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
CTTN-208ENST00000498223 LINC01554Q52M75 96 aa5.07□□□□□ -1.6
CTTN-208ENST00000498223 SYNE2Q8WXH0 6885 aaKnown RBP5.05□□□□□ -1.6
CTTN-208ENST00000498223 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
CTTN-208ENST00000498223 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
CTTN-208ENST00000498223 A0A1B0GU33 70 aa5.02□□□□□ -1.61
CTTN-208ENST00000498223 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
CTTN-208ENST00000498223 MT1BP07438 61 aa5□□□□□ -1.61
CTTN-208ENST00000498223 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
CTTN-208ENST00000498223 SMIM26A0A096LP01 95 aa4.96□□□□□ -1.62
CTTN-208ENST00000498223 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
CTTN-208ENST00000498223 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
CTTN-208ENST00000498223 V9GYY9 64 aa4.96□□□□□ -1.62
CTTN-208ENST00000498223 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
CTTN-208ENST00000498223 A0A0D9SG42 100 aa4.93□□□□□ -1.62
CTTN-208ENST00000498223 Q1T7F1 81 aa4.91□□□□□ -1.62
CTTN-208ENST00000498223 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
CTTN-208ENST00000498223 PSPHP1O15172 72 aa4.9□□□□□ -1.63
CTTN-208ENST00000498223 A6NN06 94 aa4.89□□□□□ -1.63
CTTN-208ENST00000498223 UQCR11O14957 56 aa4.86□□□□□ -1.63
CTTN-208ENST00000498223 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
CTTN-208ENST00000498223 A8MU10 97 aa4.83□□□□□ -1.64
CTTN-208ENST00000498223 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
CTTN-208ENST00000498223 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
CTTN-208ENST00000498223 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
CTTN-208ENST00000498223 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
CTTN-208ENST00000498223 KRTAP12-1P59990 96 aa4.77□□□□□ -1.65
CTTN-208ENST00000498223 MT1XP80297 61 aa4.77□□□□□ -1.65
CTTN-208ENST00000498223 NEBP20929 6669 aa4.76□□□□□ -1.65
CTTN-208ENST00000498223 A6NED7 52 aa4.76□□□□□ -1.65
CTTN-208ENST00000498223 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
CTTN-208ENST00000498223 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
CTTN-208ENST00000498223 K7ERS5 55 aa4.68□□□□□ -1.66
CTTN-208ENST00000498223 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
CTTN-208ENST00000498223 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
CTTN-208ENST00000498223 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
CTTN-208ENST00000498223 H3BS24 57 aa4.6□□□□□ -1.67
CTTN-208ENST00000498223 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
CTTN-208ENST00000498223 KMT2DO14686 5537 aa4.6□□□□□ -1.67
CTTN-208ENST00000498223 KRTAP10-7P60409 375 aaPredicted RBP4.58□□□□□ -1.68
CTTN-208ENST00000498223 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
CTTN-208ENST00000498223 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
CTTN-208ENST00000498223 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
CTTN-208ENST00000498223 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
CTTN-208ENST00000498223 TNP1P09430 55 aa4.5□□□□□ -1.69
CTTN-208ENST00000498223 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
CTTN-208ENST00000498223 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
CTTN-208ENST00000498223 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
CTTN-208ENST00000498223 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
CTTN-208ENST00000498223 BRK1Q8WUW1 75 aa4.47□□□□□ -1.69
CTTN-208ENST00000498223 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
CTTN-208ENST00000498223 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
CTTN-208ENST00000498223 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
CTTN-208ENST00000498223 SPRR2EP22531 72 aa4.42□□□□□ -1.7
CTTN-208ENST00000498223 SPRR2BP35325 72 aa4.42□□□□□ -1.7
CTTN-208ENST00000498223 SPRR2AP35326 72 aa4.42□□□□□ -1.7
CTTN-208ENST00000498223 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
CTTN-208ENST00000498223 ROMO1P60602 79 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms