RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 NDUFS5O43920 106 aa5.96□□□□□ -1.46
RNF220-217ENST00000496262 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
RNF220-217ENST00000496262 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.93□□□□□ -1.46
RNF220-217ENST00000496262 SEC61GP60059 68 aa5.93□□□□□ -1.46
RNF220-217ENST00000496262 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
RNF220-217ENST00000496262 A6NED7 52 aa5.92□□□□□ -1.46
RNF220-217ENST00000496262 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
RNF220-217ENST00000496262 A8MU10 97 aa5.89□□□□□ -1.47
RNF220-217ENST00000496262 HRES1P13985 223 aa5.89□□□□□ -1.47
RNF220-217ENST00000496262 MT1HP80294 61 aa5.89□□□□□ -1.47
RNF220-217ENST00000496262 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
RNF220-217ENST00000496262 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
RNF220-217ENST00000496262 CDC42SE1Q9NRR8 79 aa5.89□□□□□ -1.47
RNF220-217ENST00000496262 LCA10Q71F78 164 aa5.87□□□□□ -1.47
RNF220-217ENST00000496262 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
RNF220-217ENST00000496262 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
RNF220-217ENST00000496262 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
RNF220-217ENST00000496262 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
RNF220-217ENST00000496262 A6NN06 94 aa5.83□□□□□ -1.48
RNF220-217ENST00000496262 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
RNF220-217ENST00000496262 M0R2T5 61 aa5.82□□□□□ -1.48
RNF220-217ENST00000496262 RPL37P61927 97 aaKnown RBP5.82□□□□□ -1.48
RNF220-217ENST00000496262 COX6B2Q6YFQ2 88 aa5.82□□□□□ -1.48
RNF220-217ENST00000496262 ACYP2P14621 99 aa5.79□□□□□ -1.48
RNF220-217ENST00000496262 SPINK7P58062 85 aa5.79□□□□□ -1.48
RNF220-217ENST00000496262 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
RNF220-217ENST00000496262 Q5W150 140 aa5.79□□□□□ -1.48
RNF220-217ENST00000496262 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
RNF220-217ENST00000496262 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
RNF220-217ENST00000496262 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
RNF220-217ENST00000496262 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
RNF220-217ENST00000496262 LINC00313P59037 77 aa5.73□□□□□ -1.49
RNF220-217ENST00000496262 FLGP20930 4061 aaPredicted RBP5.73□□□□□ -1.49
RNF220-217ENST00000496262 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
RNF220-217ENST00000496262 RBM12B-AS1Q9P1G2 102 aa5.72□□□□□ -1.49
RNF220-217ENST00000496262 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
RNF220-217ENST00000496262 A0A1B0GU69 56 aa5.67□□□□□ -1.5
RNF220-217ENST00000496262 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.5
RNF220-217ENST00000496262 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
RNF220-217ENST00000496262 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
RNF220-217ENST00000496262 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
RNF220-217ENST00000496262 IGKV2D-30A0A075B6S6 120 aa5.61□□□□□ -1.51
RNF220-217ENST00000496262 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
RNF220-217ENST00000496262 UQCR11O14957 56 aa5.58□□□□□ -1.52
RNF220-217ENST00000496262 C20orf166-AS1Q96NR2 134 aa5.57□□□□□ -1.52
RNF220-217ENST00000496262 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
RNF220-217ENST00000496262 A8MUU9 505 aa5.55□□□□□ -1.52
RNF220-217ENST00000496262 USH2AO75445 5202 aa5.53□□□□□ -1.52
RNF220-217ENST00000496262 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
RNF220-217ENST00000496262 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
RNF220-217ENST00000496262 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
RNF220-217ENST00000496262 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
RNF220-217ENST00000496262 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
RNF220-217ENST00000496262 MT2AP02795 61 aa5.45□□□□□ -1.54
RNF220-217ENST00000496262 MT1FP04733 61 aa5.42□□□□□ -1.54
RNF220-217ENST00000496262 LINC01554Q52M75 96 aa5.42□□□□□ -1.54
RNF220-217ENST00000496262 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
RNF220-217ENST00000496262 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
RNF220-217ENST00000496262 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
RNF220-217ENST00000496262 CSAG1Q6PB30 78 aa5.36□□□□□ -1.55
RNF220-217ENST00000496262 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
RNF220-217ENST00000496262 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
RNF220-217ENST00000496262 H0YAA0 97 aa5.34□□□□□ -1.55
RNF220-217ENST00000496262 A0A1B0GU33 70 aa5.33□□□□□ -1.56
RNF220-217ENST00000496262 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
RNF220-217ENST00000496262 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
RNF220-217ENST00000496262 K7ERS5 55 aa5.25□□□□□ -1.57
RNF220-217ENST00000496262 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
RNF220-217ENST00000496262 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
RNF220-217ENST00000496262 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
RNF220-217ENST00000496262 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
RNF220-217ENST00000496262 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
RNF220-217ENST00000496262 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
RNF220-217ENST00000496262 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
RNF220-217ENST00000496262 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
RNF220-217ENST00000496262 ROMO1P60602 79 aa5.12□□□□□ -1.59
RNF220-217ENST00000496262 S4R3F8 94 aa5.1□□□□□ -1.59
RNF220-217ENST00000496262 H3BS24 57 aa5.09□□□□□ -1.59
RNF220-217ENST00000496262 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
RNF220-217ENST00000496262 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
RNF220-217ENST00000496262 A0A0D9SG42 100 aa5.03□□□□□ -1.6
RNF220-217ENST00000496262 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
RNF220-217ENST00000496262 KRTAP13-4Q3LI77 160 aa5.03□□□□□ -1.6
RNF220-217ENST00000496262 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
RNF220-217ENST00000496262 P0C880 135 aa4.95□□□□□ -1.62
RNF220-217ENST00000496262 MT1BP07438 61 aa4.91□□□□□ -1.62
RNF220-217ENST00000496262 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
RNF220-217ENST00000496262 KRTAP12-2P59991 146 aa4.89□□□□□ -1.63
RNF220-217ENST00000496262 NEBP20929 6669 aa4.89□□□□□ -1.63
RNF220-217ENST00000496262 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
RNF220-217ENST00000496262 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
RNF220-217ENST00000496262 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
RNF220-217ENST00000496262 M0QZ58 72 aa4.86□□□□□ -1.63
RNF220-217ENST00000496262 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
RNF220-217ENST00000496262 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
RNF220-217ENST00000496262 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
RNF220-217ENST00000496262 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
RNF220-217ENST00000496262 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
RNF220-217ENST00000496262 KMT2DO14686 5537 aa4.74□□□□□ -1.65
RNF220-217ENST00000496262 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms