RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	FAM236B	A0A1B0GV22	79 aa		4.77	□□□□□ -1.65
MACF1-222	ENST00000494012	KRTAP10-10	P60014	251 aa		4.77	□□□□□ -1.65
MACF1-222	ENST00000494012	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.76	□□□□□ -1.65
MACF1-222	ENST00000494012	MT1F	P04733	61 aa		4.76	□□□□□ -1.65
MACF1-222	ENST00000494012		A8MUN3	132 aa		4.74	□□□□□ -1.65
MACF1-222	ENST00000494012	KLKP1	Q107X0	134 aa		4.74	□□□□□ -1.65
MACF1-222	ENST00000494012	CSAG1	Q6PB30	78 aa		4.74	□□□□□ -1.65
MACF1-222	ENST00000494012	LCA10	Q71F78	164 aa		4.74	□□□□□ -1.65
MACF1-222	ENST00000494012	KRTAP4-8	Q9BYQ9	185 aa		4.74	□□□□□ -1.65
MACF1-222	ENST00000494012	TRAV7	A0A075B6U4	112 aa		4.73	□□□□□ -1.65
MACF1-222	ENST00000494012	KRTAP9-3	Q9BYQ3	159 aa		4.68	□□□□□ -1.66
MACF1-222	ENST00000494012	NDUFC1	O43677	76 aa		4.67	□□□□□ -1.66
MACF1-222	ENST00000494012	DMAC1	Q96GE9	116 aa		4.65	□□□□□ -1.67
MACF1-222	ENST00000494012	KRTAP4-12	Q9BQ66	201 aa		4.65	□□□□□ -1.67
MACF1-222	ENST00000494012	KRTAP19-1	Q8IUB9	90 aa		4.64	□□□□□ -1.67
MACF1-222	ENST00000494012	SERP2	Q8N6R1	65 aa		4.64	□□□□□ -1.67
MACF1-222	ENST00000494012	USH2A	O75445	5202 aa		4.64	□□□□□ -1.67
MACF1-222	ENST00000494012	SSPO	A2VEC9	5147 aa		4.62	□□□□□ -1.67
MACF1-222	ENST00000494012	C20orf197	Q8N268	126 aa		4.59	□□□□□ -1.67
MACF1-222	ENST00000494012	SNURF	Q9Y675	71 aa		4.59	□□□□□ -1.67
MACF1-222	ENST00000494012	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.59	□□□□□ -1.68
MACF1-222	ENST00000494012		H0YAA0	97 aa		4.58	□□□□□ -1.68
MACF1-222	ENST00000494012	ACYP2	P14621	99 aa		4.57	□□□□□ -1.68
MACF1-222	ENST00000494012	SPANXA2-OT1	Q8N9U9	137 aa		4.55	□□□□□ -1.68
MACF1-222	ENST00000494012	CRIPT	Q9P021	101 aa		4.55	□□□□□ -1.68
MACF1-222	ENST00000494012	COX7C	P15954	63 aa		4.53	□□□□□ -1.68
MACF1-222	ENST00000494012	SPTSSB	Q8NFR3	76 aa		4.52	□□□□□ -1.69
MACF1-222	ENST00000494012	SPRR2G	Q9BYE4	73 aa		4.52	□□□□□ -1.69
MACF1-222	ENST00000494012	ADM2	Q7Z4H4	148 aa		4.51	□□□□□ -1.69
MACF1-222	ENST00000494012	CHKB-CPT1B	H3BT56	60 aa		4.5	□□□□□ -1.69
MACF1-222	ENST00000494012	LCE3B	Q5TA77	95 aa		4.49	□□□□□ -1.69
MACF1-222	ENST00000494012	ANAPC13	Q9BS18	74 aa		4.48	□□□□□ -1.69
MACF1-222	ENST00000494012		Q5VV11	94 aa		4.47	□□□□□ -1.69
MACF1-222	ENST00000494012	MACF1	Q9UPN3	7388 aa	Known RBP	4.47	□□□□□ -1.69
MACF1-222	ENST00000494012	KRTAP19-8	Q3LI54	63 aa		4.45	□□□□□ -1.7
MACF1-222	ENST00000494012	KRTAP19-6	Q3LI70	58 aa		4.45	□□□□□ -1.7
MACF1-222	ENST00000494012	SYNE2	Q8WXH0	6885 aa	Known RBP	4.44	□□□□□ -1.7
MACF1-222	ENST00000494012	KRTAP19-4	Q3LI73	84 aa		4.43	□□□□□ -1.7
MACF1-222	ENST00000494012	KRTAP9-9	Q9BYP9	154 aa		4.43	□□□□□ -1.7
MACF1-222	ENST00000494012	KRTAP9-4	Q9BYQ2	154 aa		4.43	□□□□□ -1.7
MACF1-222	ENST00000494012		H7BZZ5	65 aa		4.41	□□□□□ -1.7
MACF1-222	ENST00000494012	MT1B	P07438	61 aa		4.41	□□□□□ -1.7
MACF1-222	ENST00000494012		P0C880	135 aa		4.41	□□□□□ -1.7
MACF1-222	ENST00000494012		R4GN34	69 aa		4.41	□□□□□ -1.7
MACF1-222	ENST00000494012	COA5	Q86WW8	74 aa		4.39	□□□□□ -1.71
MACF1-222	ENST00000494012	CYSTM1	Q9H1C7	97 aa		4.39	□□□□□ -1.71
MACF1-222	ENST00000494012		M0QZ58	72 aa		4.37	□□□□□ -1.71
MACF1-222	ENST00000494012	LCE4A	Q5TA78	99 aa		4.37	□□□□□ -1.71
MACF1-222	ENST00000494012		A6NN06	94 aa		4.34	□□□□□ -1.71
MACF1-222	ENST00000494012	CCDC179	H3BU77	68 aa		4.34	□□□□□ -1.71
MACF1-222	ENST00000494012	KRTAP6-3	Q3LI67	103 aa		4.32	□□□□□ -1.72
MACF1-222	ENST00000494012	ATP5E	P56381	51 aa	Predicted RBP	4.31	□□□□□ -1.72
MACF1-222	ENST00000494012	PLAC4	Q8WY50	150 aa		4.31	□□□□□ -1.72
MACF1-222	ENST00000494012	KRTAP4-8	A0A0G2JLE6	195 aa		4.3	□□□□□ -1.72
MACF1-222	ENST00000494012	SEC61G	P60059	68 aa		4.3	□□□□□ -1.72
MACF1-222	ENST00000494012	KRTAP10-5	P60370	271 aa		4.29	□□□□□ -1.72
MACF1-222	ENST00000494012	LINC01554	Q52M75	96 aa		4.29	□□□□□ -1.72
MACF1-222	ENST00000494012	PRO2289	Q9P1D8	64 aa		4.26	□□□□□ -1.73
MACF1-222	ENST00000494012	SERP1	Q9Y6X1	66 aa		4.26	□□□□□ -1.73
MACF1-222	ENST00000494012	TMEM258	P61165	79 aa		4.24	□□□□□ -1.73
MACF1-222	ENST00000494012	LCE1D	Q5T752	114 aa		4.22	□□□□□ -1.73
MACF1-222	ENST00000494012		A0A1B0GU69	56 aa		4.19	□□□□□ -1.74
MACF1-222	ENST00000494012	MT1X	P80297	61 aa		4.18	□□□□□ -1.74
MACF1-222	ENST00000494012	KRTAP13-4	Q3LI77	160 aa		4.18	□□□□□ -1.74
MACF1-222	ENST00000494012		A0A1B0GU33	70 aa		4.17	□□□□□ -1.74
MACF1-222	ENST00000494012	KRTAP20-1	Q3LI63	56 aa		4.17	□□□□□ -1.74
MACF1-222	ENST00000494012	MUC12	Q9UKN1	5478 aa		4.17	□□□□□ -1.74
MACF1-222	ENST00000494012	NEB	P20929	6669 aa		4.16	□□□□□ -1.74
MACF1-222	ENST00000494012	PRR15L	Q9BU68	103 aa		4.14	□□□□□ -1.75
MACF1-222	ENST00000494012	KRTAP4-7	Q9BYR0	210 aa		4.13	□□□□□ -1.75
MACF1-222	ENST00000494012	SPATA8	Q6RVD6	105 aa		4.11	□□□□□ -1.75
MACF1-222	ENST00000494012		A0A0D9SG42	100 aa		4.1	□□□□□ -1.75
MACF1-222	ENST00000494012	CAMK2N1	Q7Z7J9	78 aa		4.1	□□□□□ -1.75
MACF1-222	ENST00000494012	KRTAP4-9	Q9BYQ8	210 aa		4.1	□□□□□ -1.75
MACF1-222	ENST00000494012	KRTAP12-2	P59991	146 aa		4.08	□□□□□ -1.76
MACF1-222	ENST00000494012	LINC01558	Q9Y6Z2	57 aa		4.08	□□□□□ -1.76
MACF1-222	ENST00000494012	SMIM26	A0A096LP01	95 aa		4.07	□□□□□ -1.76
MACF1-222	ENST00000494012	KRTAP23-1	A1A580	65 aa		4.06	□□□□□ -1.76
MACF1-222	ENST00000494012	LCE5A	Q5TCM9	118 aa		4.06	□□□□□ -1.76
MACF1-222	ENST00000494012	SPINT4	Q6UDR6	99 aa		4.03	□□□□□ -1.76
MACF1-222	ENST00000494012	MDN1	Q9NU22	5596 aa		4.03	□□□□□ -1.76
MACF1-222	ENST00000494012	KRTAP5-9	P26371	169 aa		4.01	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP12-1	P59990	96 aa		4.01	□□□□□ -1.77
MACF1-222	ENST00000494012	PCP4	P48539	62 aa		4	□□□□□ -1.77
MACF1-222	ENST00000494012	KMT2D	O14686	5537 aa		3.99	□□□□□ -1.77
MACF1-222	ENST00000494012		A8MU10	97 aa		3.99	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP10-12	P60413	245 aa		3.99	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP8-1	Q8IUC2	63 aa		3.99	□□□□□ -1.77
MACF1-222	ENST00000494012		V9GYY9	64 aa		3.99	□□□□□ -1.77
MACF1-222	ENST00000494012	UQCR11	O14957	56 aa		3.98	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP10-7	P60409	375 aa	Predicted RBP	3.98	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP4-11	Q9BYQ6	195 aa		3.98	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP2-3	P0C7H8	128 aa		3.97	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP2-4	Q9BYR9	128 aa		3.97	□□□□□ -1.77
MACF1-222	ENST00000494012	KRTAP4-2	Q9BYR5	136 aa		3.96	□□□□□ -1.78
MACF1-222	ENST00000494012		Q1T7F1	81 aa		3.94	□□□□□ -1.78
MACF1-222	ENST00000494012	SPRR2F	Q96RM1	72 aa		3.93	□□□□□ -1.78
MACF1-222	ENST00000494012	PSPHP1	O15172	72 aa		3.91	□□□□□ -1.78
MACF1-222	ENST00000494012	RPS28	P62857	69 aa	Known RBP	3.89	□□□□□ -1.79
MACF1-222	ENST00000494012	MIR22HG	Q0VDD5	57 aa		3.89	□□□□□ -1.79

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