RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SERP1Q9Y6X1 66 aa3.77□□□□□ -1.81
VEGFA-214ENST00000493786 KLKP1Q107X0 134 aa3.76□□□□□ -1.81
VEGFA-214ENST00000493786 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
VEGFA-214ENST00000493786 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
VEGFA-214ENST00000493786 C20orf197Q8N268 126 aa3.74□□□□□ -1.81
VEGFA-214ENST00000493786 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
VEGFA-214ENST00000493786 A8MUN3 132 aa3.73□□□□□ -1.81
VEGFA-214ENST00000493786 S4R3F8 94 aa3.73□□□□□ -1.81
VEGFA-214ENST00000493786 SNURFQ9Y675 71 aa3.72□□□□□ -1.81
VEGFA-214ENST00000493786 ATP5EP56381 51 aaPredicted RBP3.71□□□□□ -1.82
VEGFA-214ENST00000493786 KRTAP3-1Q9BYR8 98 aa3.71□□□□□ -1.82
VEGFA-214ENST00000493786 NDUFC1O43677 76 aa3.7□□□□□ -1.82
VEGFA-214ENST00000493786 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
VEGFA-214ENST00000493786 H7BZZ5 65 aa3.68□□□□□ -1.82
VEGFA-214ENST00000493786 LCA10Q71F78 164 aa3.68□□□□□ -1.82
VEGFA-214ENST00000493786 CSAG1Q6PB30 78 aa3.67□□□□□ -1.82
VEGFA-214ENST00000493786 DMAC1Q96GE9 116 aa3.67□□□□□ -1.82
VEGFA-214ENST00000493786 ACYP2P14621 99 aa3.66□□□□□ -1.82
VEGFA-214ENST00000493786 V9GYY9 64 aa3.66□□□□□ -1.82
VEGFA-214ENST00000493786 SPANXA2-OT1Q8N9U9 137 aa3.65□□□□□ -1.83
VEGFA-214ENST00000493786 CHKB-CPT1BH3BT56 60 aa3.63□□□□□ -1.83
VEGFA-214ENST00000493786 SEC61GP60059 68 aa3.63□□□□□ -1.83
VEGFA-214ENST00000493786 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
VEGFA-214ENST00000493786 KRTAP10-10P60014 251 aa3.61□□□□□ -1.83
VEGFA-214ENST00000493786 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
VEGFA-214ENST00000493786 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
VEGFA-214ENST00000493786 MT2AP02795 61 aa3.6□□□□□ -1.83
VEGFA-214ENST00000493786 MT1FP04733 61 aa3.57□□□□□ -1.84
VEGFA-214ENST00000493786 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
VEGFA-214ENST00000493786 Q1T7F1 81 aa3.55□□□□□ -1.84
VEGFA-214ENST00000493786 H0YAA0 97 aa3.54□□□□□ -1.84
VEGFA-214ENST00000493786 COA5Q86WW8 74 aa3.54□□□□□ -1.84
VEGFA-214ENST00000493786 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.84
VEGFA-214ENST00000493786 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
VEGFA-214ENST00000493786 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
VEGFA-214ENST00000493786 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
VEGFA-214ENST00000493786 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
VEGFA-214ENST00000493786 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
VEGFA-214ENST00000493786 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
VEGFA-214ENST00000493786 PSPHP1O15172 72 aa3.44□□□□□ -1.86
VEGFA-214ENST00000493786 P0C880 135 aa3.44□□□□□ -1.86
VEGFA-214ENST00000493786 R4GN34 69 aa3.44□□□□□ -1.86
VEGFA-214ENST00000493786 USH2AO75445 5202 aa3.44□□□□□ -1.86
VEGFA-214ENST00000493786 Q5VV11 94 aa3.42□□□□□ -1.86
VEGFA-214ENST00000493786 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
VEGFA-214ENST00000493786 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
VEGFA-214ENST00000493786 FSIP2Q5CZC0 6907 aa3.41□□□□□ -1.86
VEGFA-214ENST00000493786 M0QZ58 72 aa3.41□□□□□ -1.86
VEGFA-214ENST00000493786 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
VEGFA-214ENST00000493786 A0A1B0GU69 56 aa3.39□□□□□ -1.87
VEGFA-214ENST00000493786 PRR15LQ9BU68 103 aa3.38□□□□□ -1.87
VEGFA-214ENST00000493786 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
VEGFA-214ENST00000493786 KRTAP19-8Q3LI54 63 aa3.36□□□□□ -1.87
VEGFA-214ENST00000493786 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
VEGFA-214ENST00000493786 LINC01554Q52M75 96 aa3.36□□□□□ -1.87
VEGFA-214ENST00000493786 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
VEGFA-214ENST00000493786 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
VEGFA-214ENST00000493786 A6NED7 52 aa3.35□□□□□ -1.87
VEGFA-214ENST00000493786 A6NN06 94 aa3.35□□□□□ -1.87
VEGFA-214ENST00000493786 LINC01558Q9Y6Z2 57 aa3.34□□□□□ -1.87
VEGFA-214ENST00000493786 A0A1B0GU33 70 aa3.33□□□□□ -1.88
VEGFA-214ENST00000493786 A8MU10 97 aa3.33□□□□□ -1.88
VEGFA-214ENST00000493786 PLAC4Q8WY50 150 aa3.33□□□□□ -1.88
VEGFA-214ENST00000493786 MT1BP07438 61 aa3.31□□□□□ -1.88
VEGFA-214ENST00000493786 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
VEGFA-214ENST00000493786 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
VEGFA-214ENST00000493786 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
VEGFA-214ENST00000493786 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
VEGFA-214ENST00000493786 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
VEGFA-214ENST00000493786 SPATA8Q6RVD6 105 aa3.27□□□□□ -1.89
VEGFA-214ENST00000493786 A0A0D9SG42 100 aa3.26□□□□□ -1.89
VEGFA-214ENST00000493786 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
VEGFA-214ENST00000493786 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
VEGFA-214ENST00000493786 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
VEGFA-214ENST00000493786 UQCR11O14957 56 aa3.24□□□□□ -1.89
VEGFA-214ENST00000493786 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
VEGFA-214ENST00000493786 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
VEGFA-214ENST00000493786 KRTAP10-5P60370 271 aa3.22□□□□□ -1.89
VEGFA-214ENST00000493786 SPINT4Q6UDR6 99 aa3.22□□□□□ -1.89
VEGFA-214ENST00000493786 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
VEGFA-214ENST00000493786 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
VEGFA-214ENST00000493786 MT1XP80297 61 aa3.17□□□□□ -1.9
VEGFA-214ENST00000493786 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
VEGFA-214ENST00000493786 KRTAP12-1P59990 96 aa3.16□□□□□ -1.9
VEGFA-214ENST00000493786 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
VEGFA-214ENST00000493786 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
VEGFA-214ENST00000493786 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
VEGFA-214ENST00000493786 K7ERS5 55 aa3.13□□□□□ -1.91
VEGFA-214ENST00000493786 KRTAP4-7Q9BYR0 210 aa3.12□□□□□ -1.91
VEGFA-214ENST00000493786 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
VEGFA-214ENST00000493786 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
VEGFA-214ENST00000493786 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
VEGFA-214ENST00000493786 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
VEGFA-214ENST00000493786 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
VEGFA-214ENST00000493786 KRTAP10-12P60413 245 aa3.01□□□□□ -1.93
VEGFA-214ENST00000493786 KRTAP25-1Q3LHN0 102 aa3.01□□□□□ -1.93
VEGFA-214ENST00000493786 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
VEGFA-214ENST00000493786 TNP1P09430 55 aa3□□□□□ -1.93
VEGFA-214ENST00000493786 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
VEGFA-214ENST00000493786 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms