RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 A8MUN3 132 aa7.42□□□□□ -1.22
PTPN7-216ENST00000492977 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.22
PTPN7-216ENST00000492977 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
PTPN7-216ENST00000492977 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
PTPN7-216ENST00000492977 HERC2O95714 4834 aa7.33□□□□□ -1.24
PTPN7-216ENST00000492977 PSPHP1O15172 72 aa7.32□□□□□ -1.24
PTPN7-216ENST00000492977 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
PTPN7-216ENST00000492977 PRR15LQ9BU68 103 aa7.28□□□□□ -1.24
PTPN7-216ENST00000492977 ABCA13Q86UQ4 5058 aa7.27□□□□□ -1.25
PTPN7-216ENST00000492977 PMAIP1Q13794 54 aa7.27□□□□□ -1.25
PTPN7-216ENST00000492977 Q5VV11 94 aa7.27□□□□□ -1.25
PTPN7-216ENST00000492977 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
PTPN7-216ENST00000492977 KRTAP4-12Q9BQ66 201 aa7.23□□□□□ -1.25
PTPN7-216ENST00000492977 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
PTPN7-216ENST00000492977 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
PTPN7-216ENST00000492977 SEC61GP60059 68 aa7.2□□□□□ -1.26
PTPN7-216ENST00000492977 PCLOQ9Y6V0 5065 aa7.2□□□□□ -1.26
PTPN7-216ENST00000492977 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
PTPN7-216ENST00000492977 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
PTPN7-216ENST00000492977 LCE4AQ5TA78 99 aa7.17□□□□□ -1.26
PTPN7-216ENST00000492977 A0A1B0GU69 56 aa7.16□□□□□ -1.26
PTPN7-216ENST00000492977 A6NED7 52 aa7.13□□□□□ -1.27
PTPN7-216ENST00000492977 CDC42SE1Q9NRR8 79 aa7.12□□□□□ -1.27
PTPN7-216ENST00000492977 LRP2P98164 4655 aa7.12□□□□□ -1.27
PTPN7-216ENST00000492977 LPAP08519 4548 aa7.11□□□□□ -1.27
PTPN7-216ENST00000492977 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
PTPN7-216ENST00000492977 KTN1-AS1Q86SY8 53 aa7.1□□□□□ -1.27
PTPN7-216ENST00000492977 RBM12B-AS1Q9P1G2 102 aa7.1□□□□□ -1.27
PTPN7-216ENST00000492977 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
PTPN7-216ENST00000492977 LCA10Q71F78 164 aa7.06□□□□□ -1.28
PTPN7-216ENST00000492977 S4R3F8 94 aa7.06□□□□□ -1.28
PTPN7-216ENST00000492977 KRTAP9-2Q9BYQ4 174 aa7.04□□□□□ -1.28
PTPN7-216ENST00000492977 A6NN06 94 aa7.03□□□□□ -1.28
PTPN7-216ENST00000492977 A8MU10 97 aa7□□□□□ -1.29
PTPN7-216ENST00000492977 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
PTPN7-216ENST00000492977 UQCR11O14957 56 aa6.99□□□□□ -1.29
PTPN7-216ENST00000492977 KRTAP4-1Q9BYQ7 146 aa6.97□□□□□ -1.29
PTPN7-216ENST00000492977 KRTAP9-4Q9BYQ2 154 aa6.95□□□□□ -1.3
PTPN7-216ENST00000492977 SPATA8Q6RVD6 105 aa6.93□□□□□ -1.3
PTPN7-216ENST00000492977 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
PTPN7-216ENST00000492977 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
PTPN7-216ENST00000492977 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
PTPN7-216ENST00000492977 A0A1B0GU33 70 aa6.9□□□□□ -1.31
PTPN7-216ENST00000492977 CSAG1Q6PB30 78 aa6.9□□□□□ -1.31
PTPN7-216ENST00000492977 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.31
PTPN7-216ENST00000492977 HERC1Q15751 4861 aa6.86□□□□□ -1.31
PTPN7-216ENST00000492977 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
PTPN7-216ENST00000492977 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
PTPN7-216ENST00000492977 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
PTPN7-216ENST00000492977 HMCN2Q8NDA2 5059 aa6.79□□□□□ -1.32
PTPN7-216ENST00000492977 H0YAA0 97 aa6.79□□□□□ -1.32
PTPN7-216ENST00000492977 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
PTPN7-216ENST00000492977 P0C880 135 aa6.75□□□□□ -1.33
PTPN7-216ENST00000492977 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
PTPN7-216ENST00000492977 M0QZ58 72 aa6.63□□□□□ -1.35
PTPN7-216ENST00000492977 FLGP20930 4061 aaPredicted RBP6.61□□□□□ -1.35
PTPN7-216ENST00000492977 MUC2Q02817 5179 aa6.61□□□□□ -1.35
PTPN7-216ENST00000492977 K7ERS5 55 aa6.59□□□□□ -1.35
PTPN7-216ENST00000492977 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
PTPN7-216ENST00000492977 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
PTPN7-216ENST00000492977 A0A0D9SG42 100 aa6.56□□□□□ -1.36
PTPN7-216ENST00000492977 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
PTPN7-216ENST00000492977 R4GN34 69 aa6.52□□□□□ -1.36
PTPN7-216ENST00000492977 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
PTPN7-216ENST00000492977 RNF213Q63HN8 5207 aa6.46□□□□□ -1.37
PTPN7-216ENST00000492977 UBR4Q5T4S7 5183 aa6.46□□□□□ -1.38
PTPN7-216ENST00000492977 MT1HP80294 61 aa6.44□□□□□ -1.38
PTPN7-216ENST00000492977 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
PTPN7-216ENST00000492977 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
PTPN7-216ENST00000492977 M0R2T5 61 aa6.42□□□□□ -1.38
PTPN7-216ENST00000492977 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
PTPN7-216ENST00000492977 CRIPTQ9P021 101 aa6.42□□□□□ -1.38
PTPN7-216ENST00000492977 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.38
PTPN7-216ENST00000492977 ROMO1P60602 79 aa6.32□□□□□ -1.4
PTPN7-216ENST00000492977 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
PTPN7-216ENST00000492977 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
PTPN7-216ENST00000492977 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
PTPN7-216ENST00000492977 MT2AP02795 61 aa6.24□□□□□ -1.41
PTPN7-216ENST00000492977 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
PTPN7-216ENST00000492977 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
PTPN7-216ENST00000492977 MT1FP04733 61 aa6.2□□□□□ -1.42
PTPN7-216ENST00000492977 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
PTPN7-216ENST00000492977 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
PTPN7-216ENST00000492977 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
PTPN7-216ENST00000492977 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
PTPN7-216ENST00000492977 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
PTPN7-216ENST00000492977 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
PTPN7-216ENST00000492977 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
PTPN7-216ENST00000492977 MT1BP07438 61 aa5.92□□□□□ -1.46
PTPN7-216ENST00000492977 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
PTPN7-216ENST00000492977 TNP1P09430 55 aa5.87□□□□□ -1.47
PTPN7-216ENST00000492977 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
PTPN7-216ENST00000492977 NDUFAF8A1L188 74 aa5.84□□□□□ -1.47
PTPN7-216ENST00000492977 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
PTPN7-216ENST00000492977 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
PTPN7-216ENST00000492977 MT1XP80297 61 aa5.77□□□□□ -1.49
PTPN7-216ENST00000492977 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
PTPN7-216ENST00000492977 MT3P25713 68 aa5.59□□□□□ -1.51
PTPN7-216ENST00000492977 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
PTPN7-216ENST00000492977 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms