RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
SEC61A1-206ENST00000491668 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
SEC61A1-206ENST00000491668 SERP2Q8N6R1 65 aa6.18□□□□□ -1.42
SEC61A1-206ENST00000491668 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
SEC61A1-206ENST00000491668 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
SEC61A1-206ENST00000491668 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
SEC61A1-206ENST00000491668 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
SEC61A1-206ENST00000491668 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.12□□□□□ -1.43
SEC61A1-206ENST00000491668 C20orf197Q8N268 126 aa6.11□□□□□ -1.43
SEC61A1-206ENST00000491668 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
SEC61A1-206ENST00000491668 ANAPC13Q9BS18 74 aa6.1□□□□□ -1.43
SEC61A1-206ENST00000491668 COX7CP15954 63 aa6.09□□□□□ -1.43
SEC61A1-206ENST00000491668 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
SEC61A1-206ENST00000491668 KRTAP3-1Q9BYR8 98 aa6.07□□□□□ -1.44
SEC61A1-206ENST00000491668 A8MUN3 132 aa6.05□□□□□ -1.44
SEC61A1-206ENST00000491668 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
SEC61A1-206ENST00000491668 KRTAP9-7A8MTY7 169 aa6.04□□□□□ -1.44
SEC61A1-206ENST00000491668 S4R3F8 94 aa6.04□□□□□ -1.44
SEC61A1-206ENST00000491668 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
SEC61A1-206ENST00000491668 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
SEC61A1-206ENST00000491668 LCA10Q71F78 164 aa5.98□□□□□ -1.45
SEC61A1-206ENST00000491668 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
SEC61A1-206ENST00000491668 NDUFC1O43677 76 aa5.96□□□□□ -1.46
SEC61A1-206ENST00000491668 CSAG1Q6PB30 78 aa5.96□□□□□ -1.46
SEC61A1-206ENST00000491668 ACYP2P14621 99 aa5.95□□□□□ -1.46
SEC61A1-206ENST00000491668 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
SEC61A1-206ENST00000491668 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
SEC61A1-206ENST00000491668 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
SEC61A1-206ENST00000491668 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
SEC61A1-206ENST00000491668 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
SEC61A1-206ENST00000491668 H7BZZ5 65 aa5.88□□□□□ -1.47
SEC61A1-206ENST00000491668 CYSTM1Q9H1C7 97 aa5.88□□□□□ -1.47
SEC61A1-206ENST00000491668 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
SEC61A1-206ENST00000491668 H3BS24 57 aa5.81□□□□□ -1.48
SEC61A1-206ENST00000491668 KRTAP9-9Q9BYP9 154 aa5.8□□□□□ -1.48
SEC61A1-206ENST00000491668 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
SEC61A1-206ENST00000491668 COA5Q86WW8 74 aa5.78□□□□□ -1.48
SEC61A1-206ENST00000491668 ATP5EP56381 51 aaPredicted RBP5.76□□□□□ -1.49
SEC61A1-206ENST00000491668 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
SEC61A1-206ENST00000491668 MT1BP07438 61 aa5.74□□□□□ -1.49
SEC61A1-206ENST00000491668 TMEM258P61165 79 aa5.73□□□□□ -1.49
SEC61A1-206ENST00000491668 H0YAA0 97 aa5.72□□□□□ -1.49
SEC61A1-206ENST00000491668 ADM2Q7Z4H4 148 aa5.72□□□□□ -1.49
SEC61A1-206ENST00000491668 SPRR2GQ9BYE4 73 aa5.71□□□□□ -1.5
SEC61A1-206ENST00000491668 PCP4P48539 62 aa5.7□□□□□ -1.5
SEC61A1-206ENST00000491668 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
SEC61A1-206ENST00000491668 KRTAP19-8Q3LI54 63 aa5.69□□□□□ -1.5
SEC61A1-206ENST00000491668 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
SEC61A1-206ENST00000491668 NEBP20929 6669 aa5.66□□□□□ -1.5
SEC61A1-206ENST00000491668 CRIPTQ9P021 101 aa5.64□□□□□ -1.51
SEC61A1-206ENST00000491668 Q5VV11 94 aa5.63□□□□□ -1.51
SEC61A1-206ENST00000491668 A6NN06 94 aa5.61□□□□□ -1.51
SEC61A1-206ENST00000491668 P0C880 135 aa5.61□□□□□ -1.51
SEC61A1-206ENST00000491668 SEC61GP60059 68 aa5.61□□□□□ -1.51
SEC61A1-206ENST00000491668 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
SEC61A1-206ENST00000491668 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
SEC61A1-206ENST00000491668 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
SEC61A1-206ENST00000491668 R4GN34 69 aa5.58□□□□□ -1.52
SEC61A1-206ENST00000491668 M0QZ58 72 aa5.54□□□□□ -1.52
SEC61A1-206ENST00000491668 A0A1B0GU69 56 aa5.51□□□□□ -1.53
SEC61A1-206ENST00000491668 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
SEC61A1-206ENST00000491668 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
SEC61A1-206ENST00000491668 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
SEC61A1-206ENST00000491668 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
SEC61A1-206ENST00000491668 PRR15LQ9BU68 103 aa5.47□□□□□ -1.53
SEC61A1-206ENST00000491668 KMT2DO14686 5537 aa5.44□□□□□ -1.54
SEC61A1-206ENST00000491668 A0A1B0GU33 70 aa5.43□□□□□ -1.54
SEC61A1-206ENST00000491668 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
SEC61A1-206ENST00000491668 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
SEC61A1-206ENST00000491668 MDN1Q9NU22 5596 aa5.4□□□□□ -1.54
SEC61A1-206ENST00000491668 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
SEC61A1-206ENST00000491668 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
SEC61A1-206ENST00000491668 V9GYY9 64 aa5.39□□□□□ -1.55
SEC61A1-206ENST00000491668 SMIM26A0A096LP01 95 aa5.37□□□□□ -1.55
SEC61A1-206ENST00000491668 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
SEC61A1-206ENST00000491668 MT1XP80297 61 aa5.36□□□□□ -1.55
SEC61A1-206ENST00000491668 KRTAP13-4Q3LI77 160 aa5.36□□□□□ -1.55
SEC61A1-206ENST00000491668 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
SEC61A1-206ENST00000491668 A0A0D9SG42 100 aa5.32□□□□□ -1.56
SEC61A1-206ENST00000491668 Q1T7F1 81 aa5.32□□□□□ -1.56
SEC61A1-206ENST00000491668 PSPHP1O15172 72 aa5.29□□□□□ -1.56
SEC61A1-206ENST00000491668 UQCR11O14957 56 aa5.28□□□□□ -1.56
SEC61A1-206ENST00000491668 KRTAP20-1Q3LI63 56 aa5.27□□□□□ -1.57
SEC61A1-206ENST00000491668 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
SEC61A1-206ENST00000491668 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
SEC61A1-206ENST00000491668 KRTAP4-2Q9BYR5 136 aa5.24□□□□□ -1.57
SEC61A1-206ENST00000491668 SPINT4Q6UDR6 99 aa5.23□□□□□ -1.57
SEC61A1-206ENST00000491668 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
SEC61A1-206ENST00000491668 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
SEC61A1-206ENST00000491668 A8MU10 97 aa5.21□□□□□ -1.58
SEC61A1-206ENST00000491668 CAMK2N1Q7Z7J9 78 aa5.21□□□□□ -1.58
SEC61A1-206ENST00000491668 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
SEC61A1-206ENST00000491668 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
SEC61A1-206ENST00000491668 A6NED7 52 aa5.16□□□□□ -1.58
SEC61A1-206ENST00000491668 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
SEC61A1-206ENST00000491668 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
SEC61A1-206ENST00000491668 SPRR2EP22531 72 aa5.14□□□□□ -1.59
SEC61A1-206ENST00000491668 SPRR2BP35325 72 aa5.14□□□□□ -1.59
SEC61A1-206ENST00000491668 SPRR2AP35326 72 aa5.14□□□□□ -1.59
SEC61A1-206ENST00000491668 KRTAP2-3P0C7H8 128 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms