RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 CHKB-CPT1BH3BT56 60 aa6.41□□□□□ -1.38
SRGAP3-210ENST00000491467 ATP11AUNQ6ZP68 121 aa6.37□□□□□ -1.39
SRGAP3-210ENST00000491467 PSPHP1O15172 72 aa6.36□□□□□ -1.39
SRGAP3-210ENST00000491467 PRR15LQ9BU68 103 aa6.35□□□□□ -1.39
SRGAP3-210ENST00000491467 PRO0628Q9UI54 55 aa6.35□□□□□ -1.39
SRGAP3-210ENST00000491467 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
SRGAP3-210ENST00000491467 SPINK7P58062 85 aa6.34□□□□□ -1.39
SRGAP3-210ENST00000491467 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.39
SRGAP3-210ENST00000491467 Q5VV11 94 aa6.34□□□□□ -1.39
SRGAP3-210ENST00000491467 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
SRGAP3-210ENST00000491467 MUC17Q685J3 4493 aa6.33□□□□□ -1.4
SRGAP3-210ENST00000491467 SSPOA2VEC9 5147 aa6.31□□□□□ -1.4
SRGAP3-210ENST00000491467 BRK1Q8WUW1 75 aa6.3□□□□□ -1.4
SRGAP3-210ENST00000491467 XP32Q5T750 250 aa6.29□□□□□ -1.4
SRGAP3-210ENST00000491467 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
SRGAP3-210ENST00000491467 COX6B2Q6YFQ2 88 aa6.27□□□□□ -1.41
SRGAP3-210ENST00000491467 A0A1B0GU69 56 aa6.24□□□□□ -1.41
SRGAP3-210ENST00000491467 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
SRGAP3-210ENST00000491467 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
SRGAP3-210ENST00000491467 A6NED7 52 aa6.22□□□□□ -1.41
SRGAP3-210ENST00000491467 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
SRGAP3-210ENST00000491467 SEC61GP60059 68 aa6.19□□□□□ -1.42
SRGAP3-210ENST00000491467 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
SRGAP3-210ENST00000491467 USH2AO75445 5202 aa6.18□□□□□ -1.42
SRGAP3-210ENST00000491467 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
SRGAP3-210ENST00000491467 UQCR11O14957 56 aa6.12□□□□□ -1.43
SRGAP3-210ENST00000491467 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
SRGAP3-210ENST00000491467 LCA10Q71F78 164 aa6.12□□□□□ -1.43
SRGAP3-210ENST00000491467 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.43
SRGAP3-210ENST00000491467 MT1HP80294 61 aa6.08□□□□□ -1.44
SRGAP3-210ENST00000491467 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
SRGAP3-210ENST00000491467 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
SRGAP3-210ENST00000491467 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
SRGAP3-210ENST00000491467 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
SRGAP3-210ENST00000491467 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
SRGAP3-210ENST00000491467 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
SRGAP3-210ENST00000491467 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
SRGAP3-210ENST00000491467 S4R3F8 94 aa6.03□□□□□ -1.44
SRGAP3-210ENST00000491467 NEBP20929 6669 aa6.01□□□□□ -1.45
SRGAP3-210ENST00000491467 PMAIP1Q13794 54 aa6.01□□□□□ -1.45
SRGAP3-210ENST00000491467 A8MU10 97 aa6□□□□□ -1.45
SRGAP3-210ENST00000491467 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
SRGAP3-210ENST00000491467 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
SRGAP3-210ENST00000491467 M0R2T5 61 aa5.99□□□□□ -1.45
SRGAP3-210ENST00000491467 A0A1B0GU33 70 aa5.98□□□□□ -1.45
SRGAP3-210ENST00000491467 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
SRGAP3-210ENST00000491467 A6NN06 94 aa5.93□□□□□ -1.46
SRGAP3-210ENST00000491467 CSAG1Q6PB30 78 aa5.91□□□□□ -1.46
SRGAP3-210ENST00000491467 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
SRGAP3-210ENST00000491467 H0YAA0 97 aa5.85□□□□□ -1.47
SRGAP3-210ENST00000491467 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
SRGAP3-210ENST00000491467 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
SRGAP3-210ENST00000491467 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
SRGAP3-210ENST00000491467 K7ERS5 55 aa5.8□□□□□ -1.48
SRGAP3-210ENST00000491467 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
SRGAP3-210ENST00000491467 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
SRGAP3-210ENST00000491467 M0QZ58 72 aa5.74□□□□□ -1.49
SRGAP3-210ENST00000491467 P0C880 135 aa5.73□□□□□ -1.49
SRGAP3-210ENST00000491467 KRTAP13-4Q3LI77 160 aa5.67□□□□□ -1.5
SRGAP3-210ENST00000491467 LCE2BO14633 110 aa5.65□□□□□ -1.5
SRGAP3-210ENST00000491467 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
SRGAP3-210ENST00000491467 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
SRGAP3-210ENST00000491467 KMT2DO14686 5537 aa5.62□□□□□ -1.51
SRGAP3-210ENST00000491467 GPR98Q8WXG9 6306 aa5.6□□□□□ -1.51
SRGAP3-210ENST00000491467 KRTAP19-6Q3LI70 58 aa5.6□□□□□ -1.51
SRGAP3-210ENST00000491467 A0A0D9SG42 100 aa5.59□□□□□ -1.51
SRGAP3-210ENST00000491467 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
SRGAP3-210ENST00000491467 R4GN34 69 aa5.57□□□□□ -1.52
SRGAP3-210ENST00000491467 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
SRGAP3-210ENST00000491467 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
SRGAP3-210ENST00000491467 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
SRGAP3-210ENST00000491467 ROMO1P60602 79 aa5.53□□□□□ -1.52
SRGAP3-210ENST00000491467 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
SRGAP3-210ENST00000491467 KRTAP12-2P59991 146 aa5.49□□□□□ -1.53
SRGAP3-210ENST00000491467 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
SRGAP3-210ENST00000491467 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
SRGAP3-210ENST00000491467 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
SRGAP3-210ENST00000491467 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
SRGAP3-210ENST00000491467 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
SRGAP3-210ENST00000491467 MT2AP02795 61 aa5.41□□□□□ -1.54
SRGAP3-210ENST00000491467 LINC01554Q52M75 96 aa5.4□□□□□ -1.54
SRGAP3-210ENST00000491467 KRTAP2-2Q9BYT5 123 aa5.4□□□□□ -1.54
SRGAP3-210ENST00000491467 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
SRGAP3-210ENST00000491467 MT1FP04733 61 aa5.36□□□□□ -1.55
SRGAP3-210ENST00000491467 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
SRGAP3-210ENST00000491467 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
SRGAP3-210ENST00000491467 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
SRGAP3-210ENST00000491467 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
SRGAP3-210ENST00000491467 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
SRGAP3-210ENST00000491467 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
SRGAP3-210ENST00000491467 SPRR2EP22531 72 aa5.15□□□□□ -1.59
SRGAP3-210ENST00000491467 SPRR2BP35325 72 aa5.15□□□□□ -1.59
SRGAP3-210ENST00000491467 SPRR2AP35326 72 aa5.15□□□□□ -1.59
SRGAP3-210ENST00000491467 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
SRGAP3-210ENST00000491467 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
SRGAP3-210ENST00000491467 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SRGAP3-210ENST00000491467 TNP1P09430 55 aa5.07□□□□□ -1.6
SRGAP3-210ENST00000491467 SPRR2DP22532 72 aa4.98□□□□□ -1.61
SRGAP3-210ENST00000491467 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
SRGAP3-210ENST00000491467 MT1BP07438 61 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms