RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 S4R3F8 94 aa8.18□□□□□ -1.1
RAPGEF3-212ENST00000490387 MT1FP04733 61 aa8.16□□□□□ -1.1
RAPGEF3-212ENST00000490387 LCA10Q71F78 164 aa8.16□□□□□ -1.1
RAPGEF3-212ENST00000490387 KRTAP10-10P60014 251 aa8.14□□□□□ -1.11
RAPGEF3-212ENST00000490387 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
RAPGEF3-212ENST00000490387 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
RAPGEF3-212ENST00000490387 ANAPC13Q9BS18 74 aa8.1□□□□□ -1.11
RAPGEF3-212ENST00000490387 USH2AO75445 5202 aa8.09□□□□□ -1.11
RAPGEF3-212ENST00000490387 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
RAPGEF3-212ENST00000490387 LCE2BO14633 110 aa8.06□□□□□ -1.12
RAPGEF3-212ENST00000490387 CSAG1Q6PB30 78 aa8.05□□□□□ -1.12
RAPGEF3-212ENST00000490387 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
RAPGEF3-212ENST00000490387 SSPOA2VEC9 5147 aa8.04□□□□□ -1.12
RAPGEF3-212ENST00000490387 CYSTM1Q9H1C7 97 aa8.03□□□□□ -1.12
RAPGEF3-212ENST00000490387 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
RAPGEF3-212ENST00000490387 NDUFC1O43677 76 aa7.99□□□□□ -1.13
RAPGEF3-212ENST00000490387 H7BZZ5 65 aa7.98□□□□□ -1.13
RAPGEF3-212ENST00000490387 ACYP2P14621 99 aa7.97□□□□□ -1.13
RAPGEF3-212ENST00000490387 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
RAPGEF3-212ENST00000490387 CCDC179H3BU77 68 aa7.95□□□□□ -1.14
RAPGEF3-212ENST00000490387 KRTAP9-7A8MTY7 169 aa7.94□□□□□ -1.14
RAPGEF3-212ENST00000490387 FCGBPQ9Y6R7 5405 aaPredicted RBP7.9□□□□□ -1.14
RAPGEF3-212ENST00000490387 H0YAA0 97 aa7.86□□□□□ -1.15
RAPGEF3-212ENST00000490387 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
RAPGEF3-212ENST00000490387 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
RAPGEF3-212ENST00000490387 COA5Q86WW8 74 aa7.78□□□□□ -1.16
RAPGEF3-212ENST00000490387 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
RAPGEF3-212ENST00000490387 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
RAPGEF3-212ENST00000490387 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
RAPGEF3-212ENST00000490387 ATP5EP56381 51 aaPredicted RBP7.7□□□□□ -1.18
RAPGEF3-212ENST00000490387 SVIPQ8NHG7 77 aa7.7□□□□□ -1.18
RAPGEF3-212ENST00000490387 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
RAPGEF3-212ENST00000490387 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
RAPGEF3-212ENST00000490387 P0C880 135 aa7.67□□□□□ -1.18
RAPGEF3-212ENST00000490387 TMEM258P61165 79 aa7.67□□□□□ -1.18
RAPGEF3-212ENST00000490387 MACF1Q9UPN3 7388 aaKnown RBP7.67□□□□□ -1.18
RAPGEF3-212ENST00000490387 SYNE2Q8WXH0 6885 aaKnown RBP7.64□□□□□ -1.19
RAPGEF3-212ENST00000490387 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
RAPGEF3-212ENST00000490387 PCP4P48539 62 aa7.55□□□□□ -1.2
RAPGEF3-212ENST00000490387 MT1BP07438 61 aa7.52□□□□□ -1.21
RAPGEF3-212ENST00000490387 Q5VV11 94 aa7.49□□□□□ -1.21
RAPGEF3-212ENST00000490387 R4GN34 69 aa7.49□□□□□ -1.21
RAPGEF3-212ENST00000490387 M0QZ58 72 aa7.47□□□□□ -1.21
RAPGEF3-212ENST00000490387 KRTAP6-3Q3LI67 103 aa7.46□□□□□ -1.22
RAPGEF3-212ENST00000490387 A6NN06 94 aa7.45□□□□□ -1.22
RAPGEF3-212ENST00000490387 SERP1Q9Y6X1 66 aa7.43□□□□□ -1.22
RAPGEF3-212ENST00000490387 SEC61GP60059 68 aa7.41□□□□□ -1.22
RAPGEF3-212ENST00000490387 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
RAPGEF3-212ENST00000490387 A0A1B0GU69 56 aa7.34□□□□□ -1.23
RAPGEF3-212ENST00000490387 LINC01558Q9Y6Z2 57 aa7.33□□□□□ -1.24
RAPGEF3-212ENST00000490387 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
RAPGEF3-212ENST00000490387 LINC01554Q52M75 96 aa7.31□□□□□ -1.24
RAPGEF3-212ENST00000490387 A0A1B0GU33 70 aa7.28□□□□□ -1.24
RAPGEF3-212ENST00000490387 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
RAPGEF3-212ENST00000490387 PRR15LQ9BU68 103 aa7.23□□□□□ -1.25
RAPGEF3-212ENST00000490387 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
RAPGEF3-212ENST00000490387 RPS28P62857 69 aaKnown RBP7.19□□□□□ -1.26
RAPGEF3-212ENST00000490387 NEBP20929 6669 aa7.17□□□□□ -1.26
RAPGEF3-212ENST00000490387 MT1XP80297 61 aa7.16□□□□□ -1.26
RAPGEF3-212ENST00000490387 Q1T7F1 81 aa7.16□□□□□ -1.26
RAPGEF3-212ENST00000490387 SMIM26A0A096LP01 95 aa7.14□□□□□ -1.27
RAPGEF3-212ENST00000490387 V9GYY9 64 aa7.14□□□□□ -1.27
RAPGEF3-212ENST00000490387 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
RAPGEF3-212ENST00000490387 A0A0D9SG42 100 aa7.11□□□□□ -1.27
RAPGEF3-212ENST00000490387 KRTAP5-9P26371 169 aa7.08□□□□□ -1.28
RAPGEF3-212ENST00000490387 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
RAPGEF3-212ENST00000490387 A8MU10 97 aa7.04□□□□□ -1.28
RAPGEF3-212ENST00000490387 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
RAPGEF3-212ENST00000490387 UQCR11O14957 56 aa7.03□□□□□ -1.28
RAPGEF3-212ENST00000490387 PSPHP1O15172 72 aa7.03□□□□□ -1.28
RAPGEF3-212ENST00000490387 KRTAP12-2P59991 146 aa6.99□□□□□ -1.29
RAPGEF3-212ENST00000490387 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
RAPGEF3-212ENST00000490387 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
RAPGEF3-212ENST00000490387 KMT2DO14686 5537 aa6.96□□□□□ -1.3
RAPGEF3-212ENST00000490387 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
RAPGEF3-212ENST00000490387 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
RAPGEF3-212ENST00000490387 MDN1Q9NU22 5596 aa6.9□□□□□ -1.31
RAPGEF3-212ENST00000490387 SPRR2FQ96RM1 72 aa6.88□□□□□ -1.31
RAPGEF3-212ENST00000490387 KRTAP8-1Q8IUC2 63 aa6.84□□□□□ -1.31
RAPGEF3-212ENST00000490387 KRTAP10-7P60409 375 aaPredicted RBP6.82□□□□□ -1.32
RAPGEF3-212ENST00000490387 SPRR2EP22531 72 aa6.81□□□□□ -1.32
RAPGEF3-212ENST00000490387 SPRR2BP35325 72 aa6.81□□□□□ -1.32
RAPGEF3-212ENST00000490387 SPRR2AP35326 72 aa6.81□□□□□ -1.32
RAPGEF3-212ENST00000490387 A6NED7 52 aa6.8□□□□□ -1.32
RAPGEF3-212ENST00000490387 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
RAPGEF3-212ENST00000490387 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
RAPGEF3-212ENST00000490387 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
RAPGEF3-212ENST00000490387 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
RAPGEF3-212ENST00000490387 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
RAPGEF3-212ENST00000490387 C10orf95Q9H7T3 257 aa6.69□□□□□ -1.34
RAPGEF3-212ENST00000490387 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
RAPGEF3-212ENST00000490387 K7ERS5 55 aa6.64□□□□□ -1.35
RAPGEF3-212ENST00000490387 CDC42SE1Q9NRR8 79 aa6.64□□□□□ -1.35
RAPGEF3-212ENST00000490387 SPRR2DP22532 72 aa6.58□□□□□ -1.36
RAPGEF3-212ENST00000490387 KRTAP2-2Q9BYT5 123 aa6.54□□□□□ -1.36
RAPGEF3-212ENST00000490387 KRTAP2-1Q9BYU5 128 aa6.54□□□□□ -1.36
RAPGEF3-212ENST00000490387 TNP1P09430 55 aa6.53□□□□□ -1.36
RAPGEF3-212ENST00000490387 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
RAPGEF3-212ENST00000490387 LCE3BQ5TA77 95 aa6.41□□□□□ -1.38
RAPGEF3-212ENST00000490387 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms