RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 KRTAP3-1Q9BYR8 98 aa9.11□□□□□ -0.95
SRM-206ENST00000490101 A8MUN3 132 aa9.09□□□□□ -0.95
SRM-206ENST00000490101 TMEM258P61165 79 aa9.09□□□□□ -0.95
SRM-206ENST00000490101 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
SRM-206ENST00000490101 FAM236DA0A1B0GTK5 79 aa9.06□□□□□ -0.96
SRM-206ENST00000490101 FAM236CP0DP71 79 aa9.06□□□□□ -0.96
SRM-206ENST00000490101 ATP5EP56381 51 aaPredicted RBP9.04□□□□□ -0.96
SRM-206ENST00000490101 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
SRM-206ENST00000490101 ACYP2P14621 99 aa9□□□□□ -0.97
SRM-206ENST00000490101 USH2AO75445 5202 aa8.92□□□□□ -0.98
SRM-206ENST00000490101 COA5Q86WW8 74 aa8.88□□□□□ -0.99
SRM-206ENST00000490101 SSPOA2VEC9 5147 aa8.88□□□□□ -0.99
SRM-206ENST00000490101 KRTAP9-8Q9BYQ0 159 aa8.87□□□□□ -0.99
SRM-206ENST00000490101 S4R3F8 94 aa8.87□□□□□ -0.99
SRM-206ENST00000490101 LCA10Q71F78 164 aa8.83□□□□□ -1
SRM-206ENST00000490101 CHKB-CPT1BH3BT56 60 aa8.82□□□□□ -1
SRM-206ENST00000490101 SERP1Q9Y6X1 66 aa8.82□□□□□ -1
SRM-206ENST00000490101 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
SRM-206ENST00000490101 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.75□□□□□ -1.01
SRM-206ENST00000490101 MT2AP02795 61 aa8.75□□□□□ -1.01
SRM-206ENST00000490101 SPTSSBQ8NFR3 76 aa8.74□□□□□ -1.01
SRM-206ENST00000490101 CSAG1Q6PB30 78 aa8.73□□□□□ -1.01
SRM-206ENST00000490101 KRTAP9-7A8MTY7 169 aa8.72□□□□□ -1.01
SRM-206ENST00000490101 RPS28P62857 69 aaKnown RBP8.71□□□□□ -1.02
SRM-206ENST00000490101 FCGBPQ9Y6R7 5405 aaPredicted RBP8.69□□□□□ -1.02
SRM-206ENST00000490101 MT1FP04733 61 aa8.68□□□□□ -1.02
SRM-206ENST00000490101 KRTAP10-10P60014 251 aa8.64□□□□□ -1.03
SRM-206ENST00000490101 LCE2BO14633 110 aa8.62□□□□□ -1.03
SRM-206ENST00000490101 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
SRM-206ENST00000490101 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
SRM-206ENST00000490101 SMIM26A0A096LP01 95 aa8.55□□□□□ -1.04
SRM-206ENST00000490101 H0YAA0 97 aa8.53□□□□□ -1.04
SRM-206ENST00000490101 LINC01558Q9Y6Z2 57 aa8.48□□□□□ -1.05
SRM-206ENST00000490101 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
SRM-206ENST00000490101 Q1T7F1 81 aa8.44□□□□□ -1.06
SRM-206ENST00000490101 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
SRM-206ENST00000490101 V9GYY9 64 aa8.44□□□□□ -1.06
SRM-206ENST00000490101 MACF1Q9UPN3 7388 aaKnown RBP8.44□□□□□ -1.06
SRM-206ENST00000490101 SYNE2Q8WXH0 6885 aaKnown RBP8.43□□□□□ -1.06
SRM-206ENST00000490101 SEC61GP60059 68 aa8.42□□□□□ -1.06
SRM-206ENST00000490101 A0A1B0GU69 56 aa8.4□□□□□ -1.06
SRM-206ENST00000490101 P0C880 135 aa8.37□□□□□ -1.07
SRM-206ENST00000490101 PRR15LQ9BU68 103 aa8.36□□□□□ -1.07
SRM-206ENST00000490101 KRTAP19-6Q3LI70 58 aa8.34□□□□□ -1.07
SRM-206ENST00000490101 PSPHP1O15172 72 aa8.26□□□□□ -1.09
SRM-206ENST00000490101 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
SRM-206ENST00000490101 A0A1B0GU33 70 aa8.23□□□□□ -1.09
SRM-206ENST00000490101 Q5VV11 94 aa8.22□□□□□ -1.09
SRM-206ENST00000490101 M0QZ58 72 aa8.18□□□□□ -1.1
SRM-206ENST00000490101 R4GN34 69 aa8.16□□□□□ -1.1
SRM-206ENST00000490101 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
SRM-206ENST00000490101 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
SRM-206ENST00000490101 UQCR11O14957 56 aa8.11□□□□□ -1.11
SRM-206ENST00000490101 KRTAP6-3Q3LI67 103 aa8.08□□□□□ -1.12
SRM-206ENST00000490101 SPATA8Q6RVD6 105 aa8.06□□□□□ -1.12
SRM-206ENST00000490101 A6NED7 52 aa8.02□□□□□ -1.13
SRM-206ENST00000490101 MIR22HGQ0VDD5 57 aa7.99□□□□□ -1.13
SRM-206ENST00000490101 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.14
SRM-206ENST00000490101 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
SRM-206ENST00000490101 NEBP20929 6669 aa7.92□□□□□ -1.14
SRM-206ENST00000490101 A0A0D9SG42 100 aa7.92□□□□□ -1.14
SRM-206ENST00000490101 A8MU10 97 aa7.92□□□□□ -1.14
SRM-206ENST00000490101 A6NN06 94 aa7.91□□□□□ -1.14
SRM-206ENST00000490101 MT1BP07438 61 aa7.88□□□□□ -1.15
SRM-206ENST00000490101 CDC42SE1Q9NRR8 79 aa7.87□□□□□ -1.15
SRM-206ENST00000490101 MUC12Q9UKN1 5478 aa7.86□□□□□ -1.15
SRM-206ENST00000490101 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
SRM-206ENST00000490101 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
SRM-206ENST00000490101 KRTAP12-2P59991 146 aa7.76□□□□□ -1.17
SRM-206ENST00000490101 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
SRM-206ENST00000490101 KRTAP10-5P60370 271 aa7.75□□□□□ -1.17
SRM-206ENST00000490101 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
SRM-206ENST00000490101 K7ERS5 55 aa7.68□□□□□ -1.18
SRM-206ENST00000490101 MDN1Q9NU22 5596 aa7.66□□□□□ -1.18
SRM-206ENST00000490101 KMT2DO14686 5537 aa7.65□□□□□ -1.18
SRM-206ENST00000490101 KRTAP20-1Q3LI63 56 aa7.63□□□□□ -1.19
SRM-206ENST00000490101 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
SRM-206ENST00000490101 KRTAP5-9P26371 169 aa7.6□□□□□ -1.19
SRM-206ENST00000490101 MT1XP80297 61 aa7.53□□□□□ -1.2
SRM-206ENST00000490101 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
SRM-206ENST00000490101 PRO0628Q9UI54 55 aa7.49□□□□□ -1.21
SRM-206ENST00000490101 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
SRM-206ENST00000490101 SPRR2FQ96RM1 72 aa7.38□□□□□ -1.23
SRM-206ENST00000490101 KRTAP2-3P0C7H8 128 aa7.35□□□□□ -1.23
SRM-206ENST00000490101 KRTAP2-4Q9BYR9 128 aa7.35□□□□□ -1.23
SRM-206ENST00000490101 SPRR2EP22531 72 aa7.33□□□□□ -1.24
SRM-206ENST00000490101 SPRR2BP35325 72 aa7.33□□□□□ -1.24
SRM-206ENST00000490101 SPRR2AP35326 72 aa7.33□□□□□ -1.24
SRM-206ENST00000490101 ROMO1P60602 79 aa7.33□□□□□ -1.24
SRM-206ENST00000490101 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
SRM-206ENST00000490101 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.25
SRM-206ENST00000490101 TNP1P09430 55 aa7.23□□□□□ -1.25
SRM-206ENST00000490101 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
SRM-206ENST00000490101 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
SRM-206ENST00000490101 LCE1AQ5T7P2 110 aa7.17□□□□□ -1.26
SRM-206ENST00000490101 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
SRM-206ENST00000490101 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
SRM-206ENST00000490101 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
SRM-206ENST00000490101 SPRR2DP22532 72 aa7.09□□□□□ -1.27
SRM-206ENST00000490101 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms