RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 SERP2Q8N6R1 65 aa6.14□□□□□ -1.43
HDAC1-210ENST00000490081 KRTAP3-1Q9BYR8 98 aa6.14□□□□□ -1.43
HDAC1-210ENST00000490081 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
HDAC1-210ENST00000490081 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
HDAC1-210ENST00000490081 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
HDAC1-210ENST00000490081 M0R2T5 61 aa6.1□□□□□ -1.43
HDAC1-210ENST00000490081 A8MUN3 132 aa6.09□□□□□ -1.43
HDAC1-210ENST00000490081 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
HDAC1-210ENST00000490081 COX7CP15954 63 aa6.04□□□□□ -1.44
HDAC1-210ENST00000490081 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
HDAC1-210ENST00000490081 DMAC1Q96GE9 116 aa6□□□□□ -1.45
HDAC1-210ENST00000490081 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
HDAC1-210ENST00000490081 S4R3F8 94 aa6□□□□□ -1.45
HDAC1-210ENST00000490081 SNURFQ9Y675 71 aa5.99□□□□□ -1.45
HDAC1-210ENST00000490081 SPANXA2-OT1Q8N9U9 137 aa5.98□□□□□ -1.45
HDAC1-210ENST00000490081 LCA10Q71F78 164 aa5.97□□□□□ -1.45
HDAC1-210ENST00000490081 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
HDAC1-210ENST00000490081 CSAG1Q6PB30 78 aa5.96□□□□□ -1.46
HDAC1-210ENST00000490081 NDUFC1O43677 76 aa5.95□□□□□ -1.46
HDAC1-210ENST00000490081 ACYP2P14621 99 aa5.92□□□□□ -1.46
HDAC1-210ENST00000490081 MT2AP02795 61 aa5.91□□□□□ -1.46
HDAC1-210ENST00000490081 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
HDAC1-210ENST00000490081 PCP4P48539 62 aa5.9□□□□□ -1.46
HDAC1-210ENST00000490081 LCE1DQ5T752 114 aa5.9□□□□□ -1.46
HDAC1-210ENST00000490081 H7BZZ5 65 aa5.88□□□□□ -1.47
HDAC1-210ENST00000490081 MT1FP04733 61 aa5.85□□□□□ -1.47
HDAC1-210ENST00000490081 H0YAA0 97 aa5.84□□□□□ -1.47
HDAC1-210ENST00000490081 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
HDAC1-210ENST00000490081 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
HDAC1-210ENST00000490081 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
HDAC1-210ENST00000490081 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
HDAC1-210ENST00000490081 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
HDAC1-210ENST00000490081 USH2AO75445 5202 aa5.79□□□□□ -1.48
HDAC1-210ENST00000490081 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
HDAC1-210ENST00000490081 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
HDAC1-210ENST00000490081 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
HDAC1-210ENST00000490081 ATP5EP56381 51 aaPredicted RBP5.73□□□□□ -1.49
HDAC1-210ENST00000490081 CRIPTQ9P021 101 aa5.72□□□□□ -1.49
HDAC1-210ENST00000490081 COA5Q86WW8 74 aa5.71□□□□□ -1.5
HDAC1-210ENST00000490081 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
HDAC1-210ENST00000490081 TMEM258P61165 79 aa5.68□□□□□ -1.5
HDAC1-210ENST00000490081 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
HDAC1-210ENST00000490081 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
HDAC1-210ENST00000490081 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
HDAC1-210ENST00000490081 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
HDAC1-210ENST00000490081 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-210ENST00000490081 P0C880 135 aa5.6□□□□□ -1.51
HDAC1-210ENST00000490081 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
HDAC1-210ENST00000490081 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
HDAC1-210ENST00000490081 R4GN34 69 aa5.52□□□□□ -1.53
HDAC1-210ENST00000490081 M0QZ58 72 aa5.51□□□□□ -1.53
HDAC1-210ENST00000490081 SEC61GP60059 68 aa5.51□□□□□ -1.53
HDAC1-210ENST00000490081 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
HDAC1-210ENST00000490081 Q5VV11 94 aa5.5□□□□□ -1.53
HDAC1-210ENST00000490081 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
HDAC1-210ENST00000490081 MT1BP07438 61 aa5.49□□□□□ -1.53
HDAC1-210ENST00000490081 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
HDAC1-210ENST00000490081 H3BS24 57 aa5.45□□□□□ -1.54
HDAC1-210ENST00000490081 RPS28P62857 69 aaKnown RBP5.45□□□□□ -1.54
HDAC1-210ENST00000490081 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
HDAC1-210ENST00000490081 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
HDAC1-210ENST00000490081 A0A1B0GU69 56 aa5.42□□□□□ -1.54
HDAC1-210ENST00000490081 A0A1B0GU33 70 aa5.39□□□□□ -1.55
HDAC1-210ENST00000490081 A6NN06 94 aa5.39□□□□□ -1.55
HDAC1-210ENST00000490081 PRR15LQ9BU68 103 aa5.38□□□□□ -1.55
HDAC1-210ENST00000490081 KRTAP13-4Q3LI77 160 aa5.36□□□□□ -1.55
HDAC1-210ENST00000490081 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
HDAC1-210ENST00000490081 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
HDAC1-210ENST00000490081 V9GYY9 64 aa5.34□□□□□ -1.55
HDAC1-210ENST00000490081 Q1T7F1 81 aa5.32□□□□□ -1.56
HDAC1-210ENST00000490081 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
HDAC1-210ENST00000490081 LINC01554Q52M75 96 aa5.32□□□□□ -1.56
HDAC1-210ENST00000490081 SMIM26A0A096LP01 95 aa5.31□□□□□ -1.56
HDAC1-210ENST00000490081 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
HDAC1-210ENST00000490081 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
HDAC1-210ENST00000490081 SPATA8Q6RVD6 105 aa5.26□□□□□ -1.57
HDAC1-210ENST00000490081 PRO2289Q9P1D8 64 aa5.24□□□□□ -1.57
HDAC1-210ENST00000490081 UQCR11O14957 56 aa5.22□□□□□ -1.57
HDAC1-210ENST00000490081 MT1XP80297 61 aa5.22□□□□□ -1.57
HDAC1-210ENST00000490081 A0A0D9SG42 100 aa5.17□□□□□ -1.58
HDAC1-210ENST00000490081 KRTAP12-1P59990 96 aa5.17□□□□□ -1.58
HDAC1-210ENST00000490081 NEBP20929 6669 aa5.16□□□□□ -1.58
HDAC1-210ENST00000490081 PSPHP1O15172 72 aa5.15□□□□□ -1.59
HDAC1-210ENST00000490081 A8MU10 97 aa5.13□□□□□ -1.59
HDAC1-210ENST00000490081 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
HDAC1-210ENST00000490081 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
HDAC1-210ENST00000490081 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
HDAC1-210ENST00000490081 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
HDAC1-210ENST00000490081 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
HDAC1-210ENST00000490081 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
HDAC1-210ENST00000490081 KRTAP5-9P26371 169 aa5.04□□□□□ -1.6
HDAC1-210ENST00000490081 A6NED7 52 aa5.01□□□□□ -1.61
HDAC1-210ENST00000490081 KRTAP10-12P60413 245 aa5□□□□□ -1.61
HDAC1-210ENST00000490081 KRTAP20-1Q3LI63 56 aa4.97□□□□□ -1.61
HDAC1-210ENST00000490081 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
HDAC1-210ENST00000490081 K7ERS5 55 aa4.95□□□□□ -1.62
HDAC1-210ENST00000490081 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
HDAC1-210ENST00000490081 KMT2DO14686 5537 aa4.94□□□□□ -1.62
HDAC1-210ENST00000490081 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
HDAC1-210ENST00000490081 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms