RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SPINK7P58062 85 aa7.4□□□□□ -1.22
VPS26A-205ENST00000489656 H7BZZ5 65 aa7.39□□□□□ -1.23
VPS26A-205ENST00000489656 SPANXA2-OT1Q8N9U9 137 aa7.33□□□□□ -1.24
VPS26A-205ENST00000489656 KRTAP4-2Q9BYR5 136 aa7.33□□□□□ -1.24
VPS26A-205ENST00000489656 HRES1P13985 223 aa7.32□□□□□ -1.24
VPS26A-205ENST00000489656 TMEM258P61165 79 aa7.3□□□□□ -1.24
VPS26A-205ENST00000489656 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
VPS26A-205ENST00000489656 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
VPS26A-205ENST00000489656 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
VPS26A-205ENST00000489656 ATP5EP56381 51 aaPredicted RBP7.26□□□□□ -1.25
VPS26A-205ENST00000489656 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
VPS26A-205ENST00000489656 KRTAP4-11Q9BYQ6 195 aa7.26□□□□□ -1.25
VPS26A-205ENST00000489656 LCE5AQ5TCM9 118 aa7.24□□□□□ -1.25
VPS26A-205ENST00000489656 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
VPS26A-205ENST00000489656 FAM236DA0A1B0GTK5 79 aa7.23□□□□□ -1.25
VPS26A-205ENST00000489656 FAM236CP0DP71 79 aa7.23□□□□□ -1.25
VPS26A-205ENST00000489656 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
VPS26A-205ENST00000489656 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
VPS26A-205ENST00000489656 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
VPS26A-205ENST00000489656 A8MUN3 132 aa7.2□□□□□ -1.26
VPS26A-205ENST00000489656 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
VPS26A-205ENST00000489656 ACYP2P14621 99 aa7.14□□□□□ -1.27
VPS26A-205ENST00000489656 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
VPS26A-205ENST00000489656 RNF213Q63HN8 5207 aa7.12□□□□□ -1.27
VPS26A-205ENST00000489656 KRTAP19-2Q3LHN2 52 aa7.11□□□□□ -1.27
VPS26A-205ENST00000489656 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
VPS26A-205ENST00000489656 MUC2Q02817 5179 aa7.07□□□□□ -1.28
VPS26A-205ENST00000489656 COA5Q86WW8 74 aa7.06□□□□□ -1.28
VPS26A-205ENST00000489656 SERP1Q9Y6X1 66 aa7.06□□□□□ -1.28
VPS26A-205ENST00000489656 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
VPS26A-205ENST00000489656 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
VPS26A-205ENST00000489656 CHKB-CPT1BH3BT56 60 aa6.98□□□□□ -1.29
VPS26A-205ENST00000489656 S4R3F8 94 aa6.98□□□□□ -1.29
VPS26A-205ENST00000489656 LCA10Q71F78 164 aa6.95□□□□□ -1.3
VPS26A-205ENST00000489656 FAT4Q6V0I7 4981 aa6.92□□□□□ -1.3
VPS26A-205ENST00000489656 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
VPS26A-205ENST00000489656 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
VPS26A-205ENST00000489656 SMIM26A0A096LP01 95 aa6.86□□□□□ -1.31
VPS26A-205ENST00000489656 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
VPS26A-205ENST00000489656 MT1HP80294 61 aa6.83□□□□□ -1.32
VPS26A-205ENST00000489656 Q1T7F1 81 aa6.77□□□□□ -1.33
VPS26A-205ENST00000489656 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
VPS26A-205ENST00000489656 V9GYY9 64 aa6.77□□□□□ -1.33
VPS26A-205ENST00000489656 H0YAA0 97 aa6.73□□□□□ -1.33
VPS26A-205ENST00000489656 M0R2T5 61 aa6.7□□□□□ -1.34
VPS26A-205ENST00000489656 A0A1B0GU69 56 aa6.67□□□□□ -1.34
VPS26A-205ENST00000489656 SEC61GP60059 68 aa6.67□□□□□ -1.34
VPS26A-205ENST00000489656 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
VPS26A-205ENST00000489656 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
VPS26A-205ENST00000489656 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
VPS26A-205ENST00000489656 KRTAP15-1Q3LI76 137 aa6.59□□□□□ -1.35
VPS26A-205ENST00000489656 PSPHP1O15172 72 aa6.58□□□□□ -1.36
VPS26A-205ENST00000489656 P0C880 135 aa6.58□□□□□ -1.36
VPS26A-205ENST00000489656 Q5VV11 94 aa6.58□□□□□ -1.36
VPS26A-205ENST00000489656 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
VPS26A-205ENST00000489656 MT2AP02795 61 aa6.53□□□□□ -1.36
VPS26A-205ENST00000489656 A0A1B0GU33 70 aa6.51□□□□□ -1.37
VPS26A-205ENST00000489656 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
VPS26A-205ENST00000489656 MT1FP04733 61 aa6.48□□□□□ -1.37
VPS26A-205ENST00000489656 M0QZ58 72 aa6.46□□□□□ -1.38
VPS26A-205ENST00000489656 UQCR11O14957 56 aa6.46□□□□□ -1.38
VPS26A-205ENST00000489656 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
VPS26A-205ENST00000489656 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
VPS26A-205ENST00000489656 A6NED7 52 aa6.41□□□□□ -1.38
VPS26A-205ENST00000489656 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
VPS26A-205ENST00000489656 R4GN34 69 aa6.41□□□□□ -1.38
VPS26A-205ENST00000489656 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
VPS26A-205ENST00000489656 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
VPS26A-205ENST00000489656 MIR22HGQ0VDD5 57 aa6.36□□□□□ -1.39
VPS26A-205ENST00000489656 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
VPS26A-205ENST00000489656 A8MU10 97 aa6.27□□□□□ -1.41
VPS26A-205ENST00000489656 A6NN06 94 aa6.25□□□□□ -1.41
VPS26A-205ENST00000489656 A0A0D9SG42 100 aa6.24□□□□□ -1.41
VPS26A-205ENST00000489656 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
VPS26A-205ENST00000489656 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
VPS26A-205ENST00000489656 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
VPS26A-205ENST00000489656 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
VPS26A-205ENST00000489656 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
VPS26A-205ENST00000489656 MT1BP07438 61 aa6.13□□□□□ -1.43
VPS26A-205ENST00000489656 K7ERS5 55 aa6.11□□□□□ -1.43
VPS26A-205ENST00000489656 SPINT4Q6UDR6 99 aa6.11□□□□□ -1.43
VPS26A-205ENST00000489656 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
VPS26A-205ENST00000489656 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
VPS26A-205ENST00000489656 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
VPS26A-205ENST00000489656 USH2AO75445 5202 aa6.02□□□□□ -1.45
VPS26A-205ENST00000489656 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
VPS26A-205ENST00000489656 MT1XP80297 61 aa5.9□□□□□ -1.46
VPS26A-205ENST00000489656 SSPOA2VEC9 5147 aa5.89□□□□□ -1.47
VPS26A-205ENST00000489656 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
VPS26A-205ENST00000489656 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
VPS26A-205ENST00000489656 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
VPS26A-205ENST00000489656 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
VPS26A-205ENST00000489656 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
VPS26A-205ENST00000489656 ROMO1P60602 79 aa5.84□□□□□ -1.47
VPS26A-205ENST00000489656 KRTAP25-1Q3LHN0 102 aa5.71□□□□□ -1.5
VPS26A-205ENST00000489656 TNP1P09430 55 aa5.7□□□□□ -1.5
VPS26A-205ENST00000489656 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
VPS26A-205ENST00000489656 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
VPS26A-205ENST00000489656 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
VPS26A-205ENST00000489656 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms