RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 KRTAP4-2Q9BYR5 136 aa5.71□□□□□ -1.5
HDLBP-242ENST00000488013 RBM12B-AS1Q9P1G2 102 aa5.71□□□□□ -1.5
HDLBP-242ENST00000488013 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
HDLBP-242ENST00000488013 A0A0U1RQV1 116 aa5.7□□□□□ -1.5
HDLBP-242ENST00000488013 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
HDLBP-242ENST00000488013 NDUFC1O43677 76 aa5.67□□□□□ -1.5
HDLBP-242ENST00000488013 HRES1P13985 223 aa5.67□□□□□ -1.5
HDLBP-242ENST00000488013 KLKP1Q107X0 134 aa5.67□□□□□ -1.5
HDLBP-242ENST00000488013 C20orf197Q8N268 126 aa5.67□□□□□ -1.5
HDLBP-242ENST00000488013 KRTAP4-1Q9BYQ7 146 aa5.66□□□□□ -1.5
HDLBP-242ENST00000488013 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
HDLBP-242ENST00000488013 FAM236DA0A1B0GTK5 79 aa5.62□□□□□ -1.51
HDLBP-242ENST00000488013 FAM236CP0DP71 79 aa5.62□□□□□ -1.51
HDLBP-242ENST00000488013 COX6B2Q6YFQ2 88 aa5.62□□□□□ -1.51
HDLBP-242ENST00000488013 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
HDLBP-242ENST00000488013 A8MUN3 132 aa5.61□□□□□ -1.51
HDLBP-242ENST00000488013 C4orf26Q17RF5 130 aa5.6□□□□□ -1.51
HDLBP-242ENST00000488013 SPANXA2-OT1Q8N9U9 137 aa5.59□□□□□ -1.51
HDLBP-242ENST00000488013 FSIP2Q5CZC0 6907 aa5.57□□□□□ -1.52
HDLBP-242ENST00000488013 H1FX-AS1Q4G0G2 97 aa5.56□□□□□ -1.52
HDLBP-242ENST00000488013 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
HDLBP-242ENST00000488013 H7BZZ5 65 aa5.52□□□□□ -1.53
HDLBP-242ENST00000488013 DMAC1Q96GE9 116 aa5.52□□□□□ -1.53
HDLBP-242ENST00000488013 ACYP2P14621 99 aa5.51□□□□□ -1.53
HDLBP-242ENST00000488013 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
HDLBP-242ENST00000488013 PCP4P48539 62 aa5.5□□□□□ -1.53
HDLBP-242ENST00000488013 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
HDLBP-242ENST00000488013 TMEM258P61165 79 aa5.46□□□□□ -1.54
HDLBP-242ENST00000488013 CYSTM1Q9H1C7 97 aa5.45□□□□□ -1.54
HDLBP-242ENST00000488013 S4R3F8 94 aa5.45□□□□□ -1.54
HDLBP-242ENST00000488013 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
HDLBP-242ENST00000488013 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
HDLBP-242ENST00000488013 M0R2T5 61 aa5.41□□□□□ -1.54
HDLBP-242ENST00000488013 MT1HP80294 61 aa5.41□□□□□ -1.54
HDLBP-242ENST00000488013 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
HDLBP-242ENST00000488013 SPTSSBQ8NFR3 76 aa5.41□□□□□ -1.54
HDLBP-242ENST00000488013 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
HDLBP-242ENST00000488013 LCA10Q71F78 164 aa5.38□□□□□ -1.55
HDLBP-242ENST00000488013 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
HDLBP-242ENST00000488013 COA5Q86WW8 74 aa5.35□□□□□ -1.55
HDLBP-242ENST00000488013 SERP1Q9Y6X1 66 aa5.28□□□□□ -1.56
HDLBP-242ENST00000488013 H0YAA0 97 aa5.26□□□□□ -1.57
HDLBP-242ENST00000488013 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
HDLBP-242ENST00000488013 SEC61GP60059 68 aa5.21□□□□□ -1.58
HDLBP-242ENST00000488013 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
HDLBP-242ENST00000488013 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
HDLBP-242ENST00000488013 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
HDLBP-242ENST00000488013 CRIPTQ9P021 101 aa5.16□□□□□ -1.58
HDLBP-242ENST00000488013 V9GYY9 64 aa5.15□□□□□ -1.59
HDLBP-242ENST00000488013 MT2AP02795 61 aa5.14□□□□□ -1.59
HDLBP-242ENST00000488013 KRTAP10-10P60014 251 aa5.14□□□□□ -1.59
HDLBP-242ENST00000488013 PRR15LQ9BU68 103 aa5.14□□□□□ -1.59
HDLBP-242ENST00000488013 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
HDLBP-242ENST00000488013 A0A1B0GU69 56 aa5.11□□□□□ -1.59
HDLBP-242ENST00000488013 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
HDLBP-242ENST00000488013 MT1FP04733 61 aa5.09□□□□□ -1.59
HDLBP-242ENST00000488013 Q1T7F1 81 aa5.06□□□□□ -1.6
HDLBP-242ENST00000488013 M0QZ58 72 aa5.05□□□□□ -1.6
HDLBP-242ENST00000488013 P0C880 135 aa5.05□□□□□ -1.6
HDLBP-242ENST00000488013 R4GN34 69 aa5.04□□□□□ -1.6
HDLBP-242ENST00000488013 A0A1B0GU33 70 aa5.01□□□□□ -1.61
HDLBP-242ENST00000488013 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
HDLBP-242ENST00000488013 Q5VV11 94 aa4.98□□□□□ -1.61
HDLBP-242ENST00000488013 UQCR11O14957 56 aa4.94□□□□□ -1.62
HDLBP-242ENST00000488013 PSPHP1O15172 72 aa4.93□□□□□ -1.62
HDLBP-242ENST00000488013 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
HDLBP-242ENST00000488013 A6NN06 94 aa4.89□□□□□ -1.63
HDLBP-242ENST00000488013 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
HDLBP-242ENST00000488013 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
HDLBP-242ENST00000488013 LINC01554Q52M75 96 aa4.87□□□□□ -1.63
HDLBP-242ENST00000488013 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
HDLBP-242ENST00000488013 SPATA8Q6RVD6 105 aa4.85□□□□□ -1.63
HDLBP-242ENST00000488013 MIR22HGQ0VDD5 57 aa4.84□□□□□ -1.63
HDLBP-242ENST00000488013 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
HDLBP-242ENST00000488013 A6NED7 52 aa4.83□□□□□ -1.64
HDLBP-242ENST00000488013 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
HDLBP-242ENST00000488013 A0A0D9SG42 100 aa4.79□□□□□ -1.64
HDLBP-242ENST00000488013 MT1BP07438 61 aa4.78□□□□□ -1.64
HDLBP-242ENST00000488013 USH2AO75445 5202 aa4.77□□□□□ -1.65
HDLBP-242ENST00000488013 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
HDLBP-242ENST00000488013 K7ERS5 55 aa4.76□□□□□ -1.65
HDLBP-242ENST00000488013 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
HDLBP-242ENST00000488013 A8MU10 97 aa4.73□□□□□ -1.65
HDLBP-242ENST00000488013 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
HDLBP-242ENST00000488013 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
HDLBP-242ENST00000488013 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
HDLBP-242ENST00000488013 NEBP20929 6669 aa4.72□□□□□ -1.65
HDLBP-242ENST00000488013 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
HDLBP-242ENST00000488013 CAMK2N1Q7Z7J9 78 aa4.71□□□□□ -1.66
HDLBP-242ENST00000488013 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
HDLBP-242ENST00000488013 KRTAP12-2P59991 146 aa4.66□□□□□ -1.66
HDLBP-242ENST00000488013 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
HDLBP-242ENST00000488013 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
HDLBP-242ENST00000488013 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
HDLBP-242ENST00000488013 MT1XP80297 61 aa4.59□□□□□ -1.67
HDLBP-242ENST00000488013 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
HDLBP-242ENST00000488013 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
HDLBP-242ENST00000488013 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
HDLBP-242ENST00000488013 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
HDLBP-242ENST00000488013 TNP1P09430 55 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms