RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
SMAD9-204ENST00000483941 H1FX-AS1Q4G0G2 97 aa7.05□□□□□ -1.28
SMAD9-204ENST00000483941 MT1HP80294 61 aa7.03□□□□□ -1.28
SMAD9-204ENST00000483941 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
SMAD9-204ENST00000483941 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
SMAD9-204ENST00000483941 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
SMAD9-204ENST00000483941 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
SMAD9-204ENST00000483941 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
SMAD9-204ENST00000483941 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
SMAD9-204ENST00000483941 KRTAP10-6P60371 365 aaPredicted RBP6.97□□□□□ -1.29
SMAD9-204ENST00000483941 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
SMAD9-204ENST00000483941 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
SMAD9-204ENST00000483941 COA5Q86WW8 74 aa6.95□□□□□ -1.3
SMAD9-204ENST00000483941 S4R3F8 94 aa6.95□□□□□ -1.3
SMAD9-204ENST00000483941 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
SMAD9-204ENST00000483941 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
SMAD9-204ENST00000483941 M0R2T5 61 aa6.88□□□□□ -1.31
SMAD9-204ENST00000483941 USH2AO75445 5202 aa6.86□□□□□ -1.31
SMAD9-204ENST00000483941 CSAG1Q6PB30 78 aa6.86□□□□□ -1.31
SMAD9-204ENST00000483941 LCA10Q71F78 164 aa6.86□□□□□ -1.31
SMAD9-204ENST00000483941 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
SMAD9-204ENST00000483941 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
SMAD9-204ENST00000483941 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
SMAD9-204ENST00000483941 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
SMAD9-204ENST00000483941 V9GYY9 64 aa6.76□□□□□ -1.33
SMAD9-204ENST00000483941 SEC61GP60059 68 aa6.74□□□□□ -1.33
SMAD9-204ENST00000483941 H0YAA0 97 aa6.69□□□□□ -1.34
SMAD9-204ENST00000483941 PRR15LQ9BU68 103 aa6.69□□□□□ -1.34
SMAD9-204ENST00000483941 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
SMAD9-204ENST00000483941 Q1T7F1 81 aa6.66□□□□□ -1.34
SMAD9-204ENST00000483941 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.34
SMAD9-204ENST00000483941 A0A1B0GU69 56 aa6.64□□□□□ -1.35
SMAD9-204ENST00000483941 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
SMAD9-204ENST00000483941 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.35
SMAD9-204ENST00000483941 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
SMAD9-204ENST00000483941 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
SMAD9-204ENST00000483941 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
SMAD9-204ENST00000483941 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
SMAD9-204ENST00000483941 PSPHP1O15172 72 aa6.49□□□□□ -1.37
SMAD9-204ENST00000483941 A0A1B0GU33 70 aa6.48□□□□□ -1.37
SMAD9-204ENST00000483941 LCE2BO14633 110 aa6.46□□□□□ -1.38
SMAD9-204ENST00000483941 P0C880 135 aa6.46□□□□□ -1.38
SMAD9-204ENST00000483941 M0QZ58 72 aa6.45□□□□□ -1.38
SMAD9-204ENST00000483941 UQCR11O14957 56 aa6.44□□□□□ -1.38
SMAD9-204ENST00000483941 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
SMAD9-204ENST00000483941 MT2AP02795 61 aa6.43□□□□□ -1.38
SMAD9-204ENST00000483941 R4GN34 69 aa6.43□□□□□ -1.38
SMAD9-204ENST00000483941 Q5VV11 94 aa6.42□□□□□ -1.38
SMAD9-204ENST00000483941 MT1FP04733 61 aa6.39□□□□□ -1.39
SMAD9-204ENST00000483941 A6NED7 52 aa6.37□□□□□ -1.39
SMAD9-204ENST00000483941 KRTAP9-3Q9BYQ3 159 aa6.37□□□□□ -1.39
SMAD9-204ENST00000483941 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
SMAD9-204ENST00000483941 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
SMAD9-204ENST00000483941 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
SMAD9-204ENST00000483941 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
SMAD9-204ENST00000483941 NEBP20929 6669 aa6.28□□□□□ -1.4
SMAD9-204ENST00000483941 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
SMAD9-204ENST00000483941 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
SMAD9-204ENST00000483941 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
SMAD9-204ENST00000483941 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
SMAD9-204ENST00000483941 CDC42SE1Q9NRR8 79 aa6.22□□□□□ -1.41
SMAD9-204ENST00000483941 A6NN06 94 aa6.21□□□□□ -1.42
SMAD9-204ENST00000483941 A0A0D9SG42 100 aa6.19□□□□□ -1.42
SMAD9-204ENST00000483941 K7ERS5 55 aa6.19□□□□□ -1.42
SMAD9-204ENST00000483941 A8MU10 97 aa6.14□□□□□ -1.43
SMAD9-204ENST00000483941 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
SMAD9-204ENST00000483941 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
SMAD9-204ENST00000483941 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
SMAD9-204ENST00000483941 KRTAP20-1Q3LI63 56 aa6.1□□□□□ -1.43
SMAD9-204ENST00000483941 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
SMAD9-204ENST00000483941 KRTAP12-1P59990 96 aa6.06□□□□□ -1.44
SMAD9-204ENST00000483941 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
SMAD9-204ENST00000483941 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
SMAD9-204ENST00000483941 CAMK2N1Q7Z7J9 78 aa6.01□□□□□ -1.45
SMAD9-204ENST00000483941 MT1BP07438 61 aa5.99□□□□□ -1.45
SMAD9-204ENST00000483941 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
SMAD9-204ENST00000483941 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
SMAD9-204ENST00000483941 KMT2DO14686 5537 aa5.91□□□□□ -1.46
SMAD9-204ENST00000483941 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
SMAD9-204ENST00000483941 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
SMAD9-204ENST00000483941 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
SMAD9-204ENST00000483941 ROMO1P60602 79 aa5.79□□□□□ -1.48
SMAD9-204ENST00000483941 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
SMAD9-204ENST00000483941 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
SMAD9-204ENST00000483941 MT1XP80297 61 aa5.77□□□□□ -1.49
SMAD9-204ENST00000483941 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
SMAD9-204ENST00000483941 TNP1P09430 55 aa5.71□□□□□ -1.5
SMAD9-204ENST00000483941 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
SMAD9-204ENST00000483941 SPRR2EP22531 72 aa5.6□□□□□ -1.51
SMAD9-204ENST00000483941 SPRR2BP35325 72 aa5.6□□□□□ -1.51
SMAD9-204ENST00000483941 SPRR2AP35326 72 aa5.6□□□□□ -1.51
SMAD9-204ENST00000483941 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
SMAD9-204ENST00000483941 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
SMAD9-204ENST00000483941 KRTAP2-1Q9BYU5 128 aa5.57□□□□□ -1.52
SMAD9-204ENST00000483941 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
SMAD9-204ENST00000483941 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
SMAD9-204ENST00000483941 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
SMAD9-204ENST00000483941 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
SMAD9-204ENST00000483941 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
SMAD9-204ENST00000483941 GPR98Q8WXG9 6306 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms