RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 MT1FP04733 61 aa8.35□□□□□ -1.07
NUP58-212ENST00000481980 COX7CP15954 63 aa8.35□□□□□ -1.07
NUP58-212ENST00000481980 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
NUP58-212ENST00000481980 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
NUP58-212ENST00000481980 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
NUP58-212ENST00000481980 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
NUP58-212ENST00000481980 KRTAP9-3Q9BYQ3 159 aa8.32□□□□□ -1.08
NUP58-212ENST00000481980 HRES1P13985 223 aa8.31□□□□□ -1.08
NUP58-212ENST00000481980 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
NUP58-212ENST00000481980 MACF1Q9UPN3 7388 aaKnown RBP8.28□□□□□ -1.08
NUP58-212ENST00000481980 SNURFQ9Y675 71 aa8.27□□□□□ -1.09
NUP58-212ENST00000481980 SYNE2Q8WXH0 6885 aaKnown RBP8.25□□□□□ -1.09
NUP58-212ENST00000481980 KLKP1Q107X0 134 aa8.23□□□□□ -1.09
NUP58-212ENST00000481980 NDUFC1O43677 76 aa8.22□□□□□ -1.09
NUP58-212ENST00000481980 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
NUP58-212ENST00000481980 A8MUN3 132 aa8.14□□□□□ -1.11
NUP58-212ENST00000481980 CCDC179H3BU77 68 aa8.13□□□□□ -1.11
NUP58-212ENST00000481980 KRTAP19-6Q3LI70 58 aa8.11□□□□□ -1.11
NUP58-212ENST00000481980 H1FX-AS1Q4G0G2 97 aa8.1□□□□□ -1.11
NUP58-212ENST00000481980 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
NUP58-212ENST00000481980 PCP4P48539 62 aa8.05□□□□□ -1.12
NUP58-212ENST00000481980 H7BZZ5 65 aa8.04□□□□□ -1.12
NUP58-212ENST00000481980 DMAC1Q96GE9 116 aa8.04□□□□□ -1.12
NUP58-212ENST00000481980 ACYP2P14621 99 aa8.03□□□□□ -1.12
NUP58-212ENST00000481980 S4R3F8 94 aa8.01□□□□□ -1.13
NUP58-212ENST00000481980 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
NUP58-212ENST00000481980 CYSTM1Q9H1C7 97 aa7.99□□□□□ -1.13
NUP58-212ENST00000481980 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
NUP58-212ENST00000481980 KRTAP4-8Q9BYQ9 185 aa7.98□□□□□ -1.13
NUP58-212ENST00000481980 TMEM258P61165 79 aa7.97□□□□□ -1.13
NUP58-212ENST00000481980 KRTAP3-1Q9BYR8 98 aa7.96□□□□□ -1.14
NUP58-212ENST00000481980 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
NUP58-212ENST00000481980 SPTSSBQ8NFR3 76 aa7.91□□□□□ -1.14
NUP58-212ENST00000481980 CSAG1Q6PB30 78 aa7.88□□□□□ -1.15
NUP58-212ENST00000481980 LCA10Q71F78 164 aa7.88□□□□□ -1.15
NUP58-212ENST00000481980 COA5Q86WW8 74 aa7.84□□□□□ -1.15
NUP58-212ENST00000481980 NEBP20929 6669 aa7.78□□□□□ -1.16
NUP58-212ENST00000481980 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
NUP58-212ENST00000481980 MUC12Q9UKN1 5478 aa7.69□□□□□ -1.18
NUP58-212ENST00000481980 SEC61GP60059 68 aa7.63□□□□□ -1.19
NUP58-212ENST00000481980 A6NN06 94 aa7.62□□□□□ -1.19
NUP58-212ENST00000481980 H0YAA0 97 aa7.61□□□□□ -1.19
NUP58-212ENST00000481980 ADM2Q7Z4H4 148 aa7.58□□□□□ -1.2
NUP58-212ENST00000481980 MT1BP07438 61 aa7.57□□□□□ -1.2
NUP58-212ENST00000481980 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
NUP58-212ENST00000481980 KRTAP4-12Q9BQ66 201 aa7.56□□□□□ -1.2
NUP58-212ENST00000481980 Q5VV11 94 aa7.55□□□□□ -1.2
NUP58-212ENST00000481980 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
NUP58-212ENST00000481980 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
NUP58-212ENST00000481980 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
NUP58-212ENST00000481980 SPRR2GQ9BYE4 73 aa7.52□□□□□ -1.21
NUP58-212ENST00000481980 A0A1B0GU69 56 aa7.5□□□□□ -1.21
NUP58-212ENST00000481980 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
NUP58-212ENST00000481980 KMT2DO14686 5537 aa7.48□□□□□ -1.21
NUP58-212ENST00000481980 V9GYY9 64 aa7.48□□□□□ -1.21
NUP58-212ENST00000481980 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
NUP58-212ENST00000481980 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
NUP58-212ENST00000481980 SMIM26A0A096LP01 95 aa7.46□□□□□ -1.22
NUP58-212ENST00000481980 CRIPTQ9P021 101 aa7.46□□□□□ -1.22
NUP58-212ENST00000481980 KRTAP9-9Q9BYP9 154 aa7.44□□□□□ -1.22
NUP58-212ENST00000481980 KRTAP9-4Q9BYQ2 154 aa7.44□□□□□ -1.22
NUP58-212ENST00000481980 KRTAP5-9P26371 169 aa7.42□□□□□ -1.22
NUP58-212ENST00000481980 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
NUP58-212ENST00000481980 P0C880 135 aa7.4□□□□□ -1.22
NUP58-212ENST00000481980 R4GN34 69 aa7.4□□□□□ -1.22
NUP58-212ENST00000481980 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
NUP58-212ENST00000481980 M0QZ58 72 aa7.34□□□□□ -1.23
NUP58-212ENST00000481980 Q1T7F1 81 aa7.34□□□□□ -1.23
NUP58-212ENST00000481980 A0A1B0GU33 70 aa7.32□□□□□ -1.24
NUP58-212ENST00000481980 PSPHP1O15172 72 aa7.25□□□□□ -1.25
NUP58-212ENST00000481980 LINC01554Q52M75 96 aa7.23□□□□□ -1.25
NUP58-212ENST00000481980 UQCR11O14957 56 aa7.21□□□□□ -1.26
NUP58-212ENST00000481980 KRTAP2-3P0C7H8 128 aa7.21□□□□□ -1.26
NUP58-212ENST00000481980 KRTAP2-4Q9BYR9 128 aa7.21□□□□□ -1.26
NUP58-212ENST00000481980 SPATA8Q6RVD6 105 aa7.14□□□□□ -1.27
NUP58-212ENST00000481980 A6NED7 52 aa7.12□□□□□ -1.27
NUP58-212ENST00000481980 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
NUP58-212ENST00000481980 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
NUP58-212ENST00000481980 A0A0D9SG42 100 aa7.1□□□□□ -1.27
NUP58-212ENST00000481980 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
NUP58-212ENST00000481980 PLAC4Q8WY50 150 aa7.1□□□□□ -1.27
NUP58-212ENST00000481980 SPRR2EP22531 72 aa7.09□□□□□ -1.27
NUP58-212ENST00000481980 SPRR2BP35325 72 aa7.09□□□□□ -1.27
NUP58-212ENST00000481980 SPRR2AP35326 72 aa7.09□□□□□ -1.27
NUP58-212ENST00000481980 LCE1DQ5T752 114 aa7.09□□□□□ -1.27
NUP58-212ENST00000481980 MIR22HGQ0VDD5 57 aa7.08□□□□□ -1.28
NUP58-212ENST00000481980 PRO2289Q9P1D8 64 aa7.06□□□□□ -1.28
NUP58-212ENST00000481980 MT1XP80297 61 aa7.03□□□□□ -1.28
NUP58-212ENST00000481980 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
NUP58-212ENST00000481980 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
NUP58-212ENST00000481980 K7ERS5 55 aa6.98□□□□□ -1.29
NUP58-212ENST00000481980 A8MU10 97 aa6.97□□□□□ -1.29
NUP58-212ENST00000481980 LCE1AQ5T7P2 110 aa6.97□□□□□ -1.29
NUP58-212ENST00000481980 KRTAP2-2Q9BYT5 123 aa6.96□□□□□ -1.3
NUP58-212ENST00000481980 KRTAP2-1Q9BYU5 128 aa6.96□□□□□ -1.3
NUP58-212ENST00000481980 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
NUP58-212ENST00000481980 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
NUP58-212ENST00000481980 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
NUP58-212ENST00000481980 CDC42SE1Q9NRR8 79 aa6.89□□□□□ -1.31
NUP58-212ENST00000481980 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1295 ms