RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
SRGAP3-206ENST00000480750 LINC00313P59037 77 aa4.76□□□□□ -1.65
SRGAP3-206ENST00000480750 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
SRGAP3-206ENST00000480750 LINC00208Q96KT6 92 aa4.76□□□□□ -1.65
SRGAP3-206ENST00000480750 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
SRGAP3-206ENST00000480750 A8MUU9 505 aa4.75□□□□□ -1.65
SRGAP3-206ENST00000480750 WFDC13Q8IUB5 93 aa4.74□□□□□ -1.65
SRGAP3-206ENST00000480750 IGHV6-1A0A0B4J1U7 121 aa4.73□□□□□ -1.65
SRGAP3-206ENST00000480750 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
SRGAP3-206ENST00000480750 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
SRGAP3-206ENST00000480750 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
SRGAP3-206ENST00000480750 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
SRGAP3-206ENST00000480750 LOC101927531A0A1B0GV80 90 aa4.71□□□□□ -1.66
SRGAP3-206ENST00000480750 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
SRGAP3-206ENST00000480750 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
SRGAP3-206ENST00000480750 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
SRGAP3-206ENST00000480750 A0A1B0GVX0 72 aa4.68□□□□□ -1.66
SRGAP3-206ENST00000480750 C8orf87E5RJ46 101 aa4.68□□□□□ -1.66
SRGAP3-206ENST00000480750 Q5VV11 94 aa4.68□□□□□ -1.66
SRGAP3-206ENST00000480750 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
SRGAP3-206ENST00000480750 PSPHP1O15172 72 aa4.66□□□□□ -1.66
SRGAP3-206ENST00000480750 COA5Q86WW8 74 aa4.66□□□□□ -1.66
SRGAP3-206ENST00000480750 C8orf17Q9NRJ1 99 aa4.66□□□□□ -1.66
SRGAP3-206ENST00000480750 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
SRGAP3-206ENST00000480750 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
SRGAP3-206ENST00000480750 A8MUN3 132 aa4.65□□□□□ -1.67
SRGAP3-206ENST00000480750 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.67
SRGAP3-206ENST00000480750 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
SRGAP3-206ENST00000480750 NDUFS5O43920 106 aa4.64□□□□□ -1.67
SRGAP3-206ENST00000480750 MRPL34Q9BQ48 92 aaKnown RBP4.64□□□□□ -1.67
SRGAP3-206ENST00000480750 SEC61GP60059 68 aa4.63□□□□□ -1.67
SRGAP3-206ENST00000480750 PRR15LQ9BU68 103 aa4.63□□□□□ -1.67
SRGAP3-206ENST00000480750 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
SRGAP3-206ENST00000480750 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
SRGAP3-206ENST00000480750 KTN1-AS1Q86SY8 53 aa4.6□□□□□ -1.67
SRGAP3-206ENST00000480750 A6NED7 52 aa4.59□□□□□ -1.67
SRGAP3-206ENST00000480750 HRES1P13985 223 aa4.58□□□□□ -1.68
SRGAP3-206ENST00000480750 ACYP2P14621 99 aa4.56□□□□□ -1.68
SRGAP3-206ENST00000480750 SPINK7P58062 85 aa4.56□□□□□ -1.68
SRGAP3-206ENST00000480750 A6NN06 94 aa4.53□□□□□ -1.68
SRGAP3-206ENST00000480750 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
SRGAP3-206ENST00000480750 LCA10Q71F78 164 aa4.52□□□□□ -1.69
SRGAP3-206ENST00000480750 DMAC1Q96GE9 116 aa4.52□□□□□ -1.69
SRGAP3-206ENST00000480750 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
SRGAP3-206ENST00000480750 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
SRGAP3-206ENST00000480750 SPTSSBQ8NFR3 76 aa4.49□□□□□ -1.69
SRGAP3-206ENST00000480750 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
SRGAP3-206ENST00000480750 MT2AP02795 61 aa4.48□□□□□ -1.69
SRGAP3-206ENST00000480750 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
SRGAP3-206ENST00000480750 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
SRGAP3-206ENST00000480750 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
SRGAP3-206ENST00000480750 MT1FP04733 61 aa4.45□□□□□ -1.7
SRGAP3-206ENST00000480750 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
SRGAP3-206ENST00000480750 USH2AO75445 5202 aa4.45□□□□□ -1.7
SRGAP3-206ENST00000480750 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
SRGAP3-206ENST00000480750 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
SRGAP3-206ENST00000480750 Q5W150 140 aa4.43□□□□□ -1.7
SRGAP3-206ENST00000480750 A0A1B0GU69 56 aa4.42□□□□□ -1.7
SRGAP3-206ENST00000480750 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
SRGAP3-206ENST00000480750 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
SRGAP3-206ENST00000480750 UQCR11O14957 56 aa4.41□□□□□ -1.7
SRGAP3-206ENST00000480750 A8MU10 97 aa4.4□□□□□ -1.71
SRGAP3-206ENST00000480750 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
SRGAP3-206ENST00000480750 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
SRGAP3-206ENST00000480750 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
SRGAP3-206ENST00000480750 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
SRGAP3-206ENST00000480750 S4R3F8 94 aa4.27□□□□□ -1.73
SRGAP3-206ENST00000480750 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
SRGAP3-206ENST00000480750 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
SRGAP3-206ENST00000480750 CSAG1Q6PB30 78 aa4.23□□□□□ -1.73
SRGAP3-206ENST00000480750 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
SRGAP3-206ENST00000480750 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
SRGAP3-206ENST00000480750 K7ERS5 55 aa4.18□□□□□ -1.74
SRGAP3-206ENST00000480750 A0A1B0GU33 70 aa4.15□□□□□ -1.75
SRGAP3-206ENST00000480750 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
SRGAP3-206ENST00000480750 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
SRGAP3-206ENST00000480750 H0YAA0 97 aa4.1□□□□□ -1.75
SRGAP3-206ENST00000480750 ADM2Q7Z4H4 148 aa4.1□□□□□ -1.75
SRGAP3-206ENST00000480750 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
SRGAP3-206ENST00000480750 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
SRGAP3-206ENST00000480750 MT1BP07438 61 aa4.08□□□□□ -1.76
SRGAP3-206ENST00000480750 CRIPTQ9P021 101 aa4.06□□□□□ -1.76
SRGAP3-206ENST00000480750 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
SRGAP3-206ENST00000480750 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
SRGAP3-206ENST00000480750 ROMO1P60602 79 aa4□□□□□ -1.77
SRGAP3-206ENST00000480750 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
SRGAP3-206ENST00000480750 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
SRGAP3-206ENST00000480750 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
SRGAP3-206ENST00000480750 R4GN34 69 aa3.93□□□□□ -1.78
SRGAP3-206ENST00000480750 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
SRGAP3-206ENST00000480750 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
SRGAP3-206ENST00000480750 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
SRGAP3-206ENST00000480750 M0QZ58 72 aa3.89□□□□□ -1.79
SRGAP3-206ENST00000480750 P0C880 135 aa3.89□□□□□ -1.79
SRGAP3-206ENST00000480750 NEBP20929 6669 aa3.87□□□□□ -1.79
SRGAP3-206ENST00000480750 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
SRGAP3-206ENST00000480750 KMT2DO14686 5537 aa3.82□□□□□ -1.8
SRGAP3-206ENST00000480750 MT1XP80297 61 aa3.81□□□□□ -1.8
SRGAP3-206ENST00000480750 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
SRGAP3-206ENST00000480750 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms