RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
RUNX3-204ENST00000479341 LCA10Q71F78 164 aa8.96□□□□□ -0.98
RUNX3-204ENST00000479341 SPANXA2-OT1Q8N9U9 137 aa8.96□□□□□ -0.98
RUNX3-204ENST00000479341 CYSTM1Q9H1C7 97 aa8.96□□□□□ -0.98
RUNX3-204ENST00000479341 CCDC179H3BU77 68 aa8.95□□□□□ -0.98
RUNX3-204ENST00000479341 NDUFC1O43677 76 aa8.94□□□□□ -0.98
RUNX3-204ENST00000479341 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
RUNX3-204ENST00000479341 H7BZZ5 65 aa8.91□□□□□ -0.98
RUNX3-204ENST00000479341 ACYP2P14621 99 aa8.88□□□□□ -0.99
RUNX3-204ENST00000479341 CSAG1Q6PB30 78 aa8.88□□□□□ -0.99
RUNX3-204ENST00000479341 KRTAP9-8Q9BYQ0 159 aa8.88□□□□□ -0.99
RUNX3-204ENST00000479341 MT2AP02795 61 aa8.8□□□□□ -1
RUNX3-204ENST00000479341 MT1FP04733 61 aa8.74□□□□□ -1.01
RUNX3-204ENST00000479341 CHKB-CPT1BH3BT56 60 aa8.69□□□□□ -1.02
RUNX3-204ENST00000479341 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
RUNX3-204ENST00000479341 COA5Q86WW8 74 aa8.67□□□□□ -1.02
RUNX3-204ENST00000479341 SPTSSBQ8NFR3 76 aa8.64□□□□□ -1.03
RUNX3-204ENST00000479341 H0YAA0 97 aa8.63□□□□□ -1.03
RUNX3-204ENST00000479341 ATP5EP56381 51 aaPredicted RBP8.63□□□□□ -1.03
RUNX3-204ENST00000479341 TMEM258P61165 79 aa8.62□□□□□ -1.03
RUNX3-204ENST00000479341 PCP4P48539 62 aa8.6□□□□□ -1.03
RUNX3-204ENST00000479341 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
RUNX3-204ENST00000479341 ADM2Q7Z4H4 148 aa8.55□□□□□ -1.04
RUNX3-204ENST00000479341 USH2AO75445 5202 aa8.52□□□□□ -1.04
RUNX3-204ENST00000479341 SSPOA2VEC9 5147 aa8.51□□□□□ -1.05
RUNX3-204ENST00000479341 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
RUNX3-204ENST00000479341 KRTAP9-7A8MTY7 169 aa8.46□□□□□ -1.06
RUNX3-204ENST00000479341 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.06
RUNX3-204ENST00000479341 P0C880 135 aa8.44□□□□□ -1.06
RUNX3-204ENST00000479341 CRIPTQ9P021 101 aa8.43□□□□□ -1.06
RUNX3-204ENST00000479341 LCE2BO14633 110 aa8.42□□□□□ -1.06
RUNX3-204ENST00000479341 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
RUNX3-204ENST00000479341 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
RUNX3-204ENST00000479341 SERP1Q9Y6X1 66 aa8.37□□□□□ -1.07
RUNX3-204ENST00000479341 FCGBPQ9Y6R7 5405 aaPredicted RBP8.34□□□□□ -1.07
RUNX3-204ENST00000479341 SEC61GP60059 68 aa8.27□□□□□ -1.09
RUNX3-204ENST00000479341 KRTAP19-8Q3LI54 63 aa8.26□□□□□ -1.09
RUNX3-204ENST00000479341 R4GN34 69 aa8.26□□□□□ -1.09
RUNX3-204ENST00000479341 M0QZ58 72 aa8.23□□□□□ -1.09
RUNX3-204ENST00000479341 A0A1B0GU69 56 aa8.2□□□□□ -1.1
RUNX3-204ENST00000479341 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
RUNX3-204ENST00000479341 MT1BP07438 61 aa8.18□□□□□ -1.1
RUNX3-204ENST00000479341 Q5VV11 94 aa8.17□□□□□ -1.1
RUNX3-204ENST00000479341 RPS28P62857 69 aaKnown RBP8.15□□□□□ -1.1
RUNX3-204ENST00000479341 A0A1B0GU33 70 aa8.12□□□□□ -1.11
RUNX3-204ENST00000479341 KRTAP13-4Q3LI77 160 aa8.12□□□□□ -1.11
RUNX3-204ENST00000479341 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
RUNX3-204ENST00000479341 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
RUNX3-204ENST00000479341 SMIM26A0A096LP01 95 aa8.08□□□□□ -1.12
RUNX3-204ENST00000479341 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
RUNX3-204ENST00000479341 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
RUNX3-204ENST00000479341 Q1T7F1 81 aa8.04□□□□□ -1.12
RUNX3-204ENST00000479341 KRTAP19-6Q3LI70 58 aa8.03□□□□□ -1.12
RUNX3-204ENST00000479341 V9GYY9 64 aa8.03□□□□□ -1.12
RUNX3-204ENST00000479341 SPATA8Q6RVD6 105 aa8□□□□□ -1.13
RUNX3-204ENST00000479341 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
RUNX3-204ENST00000479341 A6NN06 94 aa7.96□□□□□ -1.14
RUNX3-204ENST00000479341 PSPHP1O15172 72 aa7.9□□□□□ -1.14
RUNX3-204ENST00000479341 A0A0D9SG42 100 aa7.89□□□□□ -1.15
RUNX3-204ENST00000479341 KRTAP10-5P60370 271 aa7.87□□□□□ -1.15
RUNX3-204ENST00000479341 UQCR11O14957 56 aa7.86□□□□□ -1.15
RUNX3-204ENST00000479341 A8MU10 97 aa7.83□□□□□ -1.16
RUNX3-204ENST00000479341 KRTAP6-3Q3LI67 103 aa7.82□□□□□ -1.16
RUNX3-204ENST00000479341 MT1XP80297 61 aa7.79□□□□□ -1.16
RUNX3-204ENST00000479341 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
RUNX3-204ENST00000479341 MIR22HGQ0VDD5 57 aa7.74□□□□□ -1.17
RUNX3-204ENST00000479341 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
RUNX3-204ENST00000479341 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
RUNX3-204ENST00000479341 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
RUNX3-204ENST00000479341 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
RUNX3-204ENST00000479341 A6NED7 52 aa7.66□□□□□ -1.18
RUNX3-204ENST00000479341 NEBP20929 6669 aa7.61□□□□□ -1.19
RUNX3-204ENST00000479341 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
RUNX3-204ENST00000479341 CDC42SE1Q9NRR8 79 aa7.46□□□□□ -1.22
RUNX3-204ENST00000479341 K7ERS5 55 aa7.45□□□□□ -1.22
RUNX3-204ENST00000479341 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
RUNX3-204ENST00000479341 KRTAP10-12P60413 245 aa7.41□□□□□ -1.22
RUNX3-204ENST00000479341 KRTAP20-1Q3LI63 56 aa7.41□□□□□ -1.22
RUNX3-204ENST00000479341 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
RUNX3-204ENST00000479341 MDN1Q9NU22 5596 aa7.35□□□□□ -1.23
RUNX3-204ENST00000479341 KMT2DO14686 5537 aa7.32□□□□□ -1.24
RUNX3-204ENST00000479341 KRTAP5-9P26371 169 aa7.3□□□□□ -1.24
RUNX3-204ENST00000479341 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
RUNX3-204ENST00000479341 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
RUNX3-204ENST00000479341 TNP1P09430 55 aa7.24□□□□□ -1.25
RUNX3-204ENST00000479341 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
RUNX3-204ENST00000479341 BRK1Q8WUW1 75 aa7.2□□□□□ -1.26
RUNX3-204ENST00000479341 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
RUNX3-204ENST00000479341 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
RUNX3-204ENST00000479341 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
RUNX3-204ENST00000479341 ROMO1P60602 79 aa7.09□□□□□ -1.27
RUNX3-204ENST00000479341 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
RUNX3-204ENST00000479341 SPRR2EP22531 72 aa7.05□□□□□ -1.28
RUNX3-204ENST00000479341 SPRR2BP35325 72 aa7.05□□□□□ -1.28
RUNX3-204ENST00000479341 SPRR2AP35326 72 aa7.05□□□□□ -1.28
RUNX3-204ENST00000479341 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
RUNX3-204ENST00000479341 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
RUNX3-204ENST00000479341 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
RUNX3-204ENST00000479341 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
RUNX3-204ENST00000479341 KRTAP2-2Q9BYT5 123 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms