RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 UQCRQO14949 82 aa3.55□□□□□ -1.84
USP48-208ENST00000479177 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
USP48-208ENST00000479177 TP53AIP1Q9HCN2 124 aa3.55□□□□□ -1.84
USP48-208ENST00000479177 ZCCHC13Q8WW36 166 aaKnown RBP3.54□□□□□ -1.84
USP48-208ENST00000479177 TRAV22A0A0B4J277 110 aa3.53□□□□□ -1.84
USP48-208ENST00000479177 Q5W150 140 aa3.53□□□□□ -1.84
USP48-208ENST00000479177 SERP2Q8N6R1 65 aa3.53□□□□□ -1.84
USP48-208ENST00000479177 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
USP48-208ENST00000479177 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
USP48-208ENST00000479177 H0Y9P7 68 aa3.51□□□□□ -1.85
USP48-208ENST00000479177 COX7CP15954 63 aa3.5□□□□□ -1.85
USP48-208ENST00000479177 C5orf47Q569G3 176 aa3.5□□□□□ -1.85
USP48-208ENST00000479177 PCOTHQ58A44 107 aa3.5□□□□□ -1.85
USP48-208ENST00000479177 ATP11AUNQ6ZP68 121 aa3.5□□□□□ -1.85
USP48-208ENST00000479177 MP68P56378 58 aa3.49□□□□□ -1.85
USP48-208ENST00000479177 A0A0U1RQV1 116 aa3.48□□□□□ -1.85
USP48-208ENST00000479177 H3BPC8 53 aa3.48□□□□□ -1.85
USP48-208ENST00000479177 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
USP48-208ENST00000479177 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
USP48-208ENST00000479177 LOC101927531A0A1B0GV80 90 aa3.47□□□□□ -1.85
USP48-208ENST00000479177 C20orf197Q8N268 126 aa3.47□□□□□ -1.85
USP48-208ENST00000479177 LINC00208Q96KT6 92 aa3.47□□□□□ -1.85
USP48-208ENST00000479177 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
USP48-208ENST00000479177 C7orf65Q6ZTY9 151 aa3.46□□□□□ -1.86
USP48-208ENST00000479177 C1orf64Q8NEQ6 169 aa3.46□□□□□ -1.86
USP48-208ENST00000479177 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
USP48-208ENST00000479177 RNF213Q63HN8 5207 aa3.45□□□□□ -1.86
USP48-208ENST00000479177 KLKP1Q107X0 134 aa3.45□□□□□ -1.86
USP48-208ENST00000479177 SNURFQ9Y675 71 aa3.45□□□□□ -1.86
USP48-208ENST00000479177 SPINK7P58062 85 aa3.44□□□□□ -1.86
USP48-208ENST00000479177 KRTAP4-1Q9BYQ7 146 aa3.44□□□□□ -1.86
USP48-208ENST00000479177 CYP4F30PQ9H0H9 118 aa3.44□□□□□ -1.86
USP48-208ENST00000479177 CYSTM1Q9H1C7 97 aa3.43□□□□□ -1.86
USP48-208ENST00000479177 HRES1P13985 223 aa3.41□□□□□ -1.86
USP48-208ENST00000479177 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
USP48-208ENST00000479177 H7BZZ5 65 aa3.39□□□□□ -1.87
USP48-208ENST00000479177 NDUFC1O43677 76 aa3.39□□□□□ -1.87
USP48-208ENST00000479177 C4orf26Q17RF5 130 aa3.37□□□□□ -1.87
USP48-208ENST00000479177 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
USP48-208ENST00000479177 MUC2Q02817 5179 aa3.37□□□□□ -1.87
USP48-208ENST00000479177 SPANXA2-OT1Q8N9U9 137 aa3.36□□□□□ -1.87
USP48-208ENST00000479177 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
USP48-208ENST00000479177 COX6B2Q6YFQ2 88 aa3.35□□□□□ -1.87
USP48-208ENST00000479177 KRTAP19-2Q3LHN2 52 aa3.34□□□□□ -1.87
USP48-208ENST00000479177 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
USP48-208ENST00000479177 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
USP48-208ENST00000479177 NDUFAF8A1L188 74 aa3.33□□□□□ -1.88
USP48-208ENST00000479177 TMEM258P61165 79 aa3.33□□□□□ -1.88
USP48-208ENST00000479177 FAM236DA0A1B0GTK5 79 aa3.32□□□□□ -1.88
USP48-208ENST00000479177 A8MUN3 132 aa3.32□□□□□ -1.88
USP48-208ENST00000479177 FAM236CP0DP71 79 aa3.32□□□□□ -1.88
USP48-208ENST00000479177 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
USP48-208ENST00000479177 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
USP48-208ENST00000479177 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
USP48-208ENST00000479177 H1FX-AS1Q4G0G2 97 aa3.29□□□□□ -1.88
USP48-208ENST00000479177 ACYP2P14621 99 aa3.27□□□□□ -1.89
USP48-208ENST00000479177 COA5Q86WW8 74 aa3.26□□□□□ -1.89
USP48-208ENST00000479177 S4R3F8 94 aa3.25□□□□□ -1.89
USP48-208ENST00000479177 LCA10Q71F78 164 aa3.24□□□□□ -1.89
USP48-208ENST00000479177 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
USP48-208ENST00000479177 CHKB-CPT1BH3BT56 60 aa3.22□□□□□ -1.89
USP48-208ENST00000479177 MT1HP80294 61 aa3.22□□□□□ -1.89
USP48-208ENST00000479177 SPTSSBQ8NFR3 76 aa3.18□□□□□ -1.9
USP48-208ENST00000479177 CSAG1Q6PB30 78 aa3.17□□□□□ -1.9
USP48-208ENST00000479177 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
USP48-208ENST00000479177 M0R2T5 61 aa3.15□□□□□ -1.91
USP48-208ENST00000479177 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
USP48-208ENST00000479177 H0YAA0 97 aa3.12□□□□□ -1.91
USP48-208ENST00000479177 LINC01558Q9Y6Z2 57 aa3.1□□□□□ -1.91
USP48-208ENST00000479177 MT2AP02795 61 aa3.09□□□□□ -1.91
USP48-208ENST00000479177 ADM2Q7Z4H4 148 aa3.09□□□□□ -1.91
USP48-208ENST00000479177 Q1T7F1 81 aa3.08□□□□□ -1.92
USP48-208ENST00000479177 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
USP48-208ENST00000479177 MT1FP04733 61 aa3.07□□□□□ -1.92
USP48-208ENST00000479177 P0C880 135 aa3.07□□□□□ -1.92
USP48-208ENST00000479177 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
USP48-208ENST00000479177 V9GYY9 64 aa3.07□□□□□ -1.92
USP48-208ENST00000479177 A0A1B0GU69 56 aa3.06□□□□□ -1.92
USP48-208ENST00000479177 SEC61GP60059 68 aa3.06□□□□□ -1.92
USP48-208ENST00000479177 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
USP48-208ENST00000479177 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
USP48-208ENST00000479177 PSPHP1O15172 72 aa3.02□□□□□ -1.93
USP48-208ENST00000479177 Q5VV11 94 aa3.02□□□□□ -1.93
USP48-208ENST00000479177 A0A1B0GU33 70 aa3□□□□□ -1.93
USP48-208ENST00000479177 CRIPTQ9P021 101 aa3□□□□□ -1.93
USP48-208ENST00000479177 KRTAP13-4Q3LI77 160 aa2.99□□□□□ -1.93
USP48-208ENST00000479177 M0QZ58 72 aa2.98□□□□□ -1.93
USP48-208ENST00000479177 R4GN34 69 aa2.98□□□□□ -1.93
USP48-208ENST00000479177 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
USP48-208ENST00000479177 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
USP48-208ENST00000479177 UQCR11O14957 56 aa2.95□□□□□ -1.94
USP48-208ENST00000479177 KRTAP12-2P59991 146 aa2.95□□□□□ -1.94
USP48-208ENST00000479177 A6NED7 52 aa2.93□□□□□ -1.94
USP48-208ENST00000479177 MIR22HGQ0VDD5 57 aa2.92□□□□□ -1.94
USP48-208ENST00000479177 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
USP48-208ENST00000479177 USH2AO75445 5202 aa2.91□□□□□ -1.94
USP48-208ENST00000479177 A8MU10 97 aa2.91□□□□□ -1.94
USP48-208ENST00000479177 LINC01554Q52M75 96 aa2.91□□□□□ -1.94
USP48-208ENST00000479177 A0A0D9SG42 100 aa2.9□□□□□ -1.95
USP48-208ENST00000479177 A6NN06 94 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms