RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 NDUFC1O43677 76 aa8.59□□□□□ -1.03
PTPN7-209ENST00000477554 CCDC179H3BU77 68 aa8.58□□□□□ -1.04
PTPN7-209ENST00000477554 SSPOA2VEC9 5147 aa8.55□□□□□ -1.04
PTPN7-209ENST00000477554 A8MUN3 132 aa8.52□□□□□ -1.05
PTPN7-209ENST00000477554 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
PTPN7-209ENST00000477554 KRTAP9-3Q9BYQ3 159 aa8.51□□□□□ -1.05
PTPN7-209ENST00000477554 H7BZZ5 65 aa8.5□□□□□ -1.05
PTPN7-209ENST00000477554 LCE2BO14633 110 aa8.5□□□□□ -1.05
PTPN7-209ENST00000477554 H1FX-AS1Q4G0G2 97 aa8.5□□□□□ -1.05
PTPN7-209ENST00000477554 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
PTPN7-209ENST00000477554 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
PTPN7-209ENST00000477554 KRTAP10-10P60014 251 aa8.49□□□□□ -1.05
PTPN7-209ENST00000477554 PCP4P48539 62 aa8.46□□□□□ -1.05
PTPN7-209ENST00000477554 DMAC1Q96GE9 116 aa8.46□□□□□ -1.05
PTPN7-209ENST00000477554 ACYP2P14621 99 aa8.4□□□□□ -1.06
PTPN7-209ENST00000477554 S4R3F8 94 aa8.37□□□□□ -1.07
PTPN7-209ENST00000477554 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
PTPN7-209ENST00000477554 TMEM258P61165 79 aa8.34□□□□□ -1.07
PTPN7-209ENST00000477554 FCGBPQ9Y6R7 5405 aaPredicted RBP8.32□□□□□ -1.08
PTPN7-209ENST00000477554 LCA10Q71F78 164 aa8.31□□□□□ -1.08
PTPN7-209ENST00000477554 KRTAP19-1Q8IUB9 90 aa8.29□□□□□ -1.08
PTPN7-209ENST00000477554 CHKB-CPT1BH3BT56 60 aa8.25□□□□□ -1.09
PTPN7-209ENST00000477554 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
PTPN7-209ENST00000477554 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
PTPN7-209ENST00000477554 COA5Q86WW8 74 aa8.22□□□□□ -1.09
PTPN7-209ENST00000477554 SPTSSBQ8NFR3 76 aa8.2□□□□□ -1.1
PTPN7-209ENST00000477554 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
PTPN7-209ENST00000477554 KRTAP19-6Q3LI70 58 aa8.09□□□□□ -1.11
PTPN7-209ENST00000477554 SERP1Q9Y6X1 66 aa8.07□□□□□ -1.12
PTPN7-209ENST00000477554 KRTAP9-7A8MTY7 169 aa8.03□□□□□ -1.12
PTPN7-209ENST00000477554 H0YAA0 97 aa8.03□□□□□ -1.12
PTPN7-209ENST00000477554 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
PTPN7-209ENST00000477554 SYNE2Q8WXH0 6885 aaKnown RBP7.95□□□□□ -1.14
PTPN7-209ENST00000477554 MT1BP07438 61 aa7.94□□□□□ -1.14
PTPN7-209ENST00000477554 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
PTPN7-209ENST00000477554 RPS28P62857 69 aaKnown RBP7.92□□□□□ -1.14
PTPN7-209ENST00000477554 SEC61GP60059 68 aa7.9□□□□□ -1.14
PTPN7-209ENST00000477554 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
PTPN7-209ENST00000477554 KRTAP19-8Q3LI54 63 aa7.86□□□□□ -1.15
PTPN7-209ENST00000477554 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
PTPN7-209ENST00000477554 SMIM26A0A096LP01 95 aa7.82□□□□□ -1.16
PTPN7-209ENST00000477554 P0C880 135 aa7.82□□□□□ -1.16
PTPN7-209ENST00000477554 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
PTPN7-209ENST00000477554 A0A1B0GU69 56 aa7.81□□□□□ -1.16
PTPN7-209ENST00000477554 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
PTPN7-209ENST00000477554 Q5VV11 94 aa7.79□□□□□ -1.16
PTPN7-209ENST00000477554 V9GYY9 64 aa7.79□□□□□ -1.16
PTPN7-209ENST00000477554 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
PTPN7-209ENST00000477554 Q1T7F1 81 aa7.75□□□□□ -1.17
PTPN7-209ENST00000477554 R4GN34 69 aa7.71□□□□□ -1.17
PTPN7-209ENST00000477554 A6NN06 94 aa7.7□□□□□ -1.18
PTPN7-209ENST00000477554 M0QZ58 72 aa7.67□□□□□ -1.18
PTPN7-209ENST00000477554 KRTAP10-5P60370 271 aa7.67□□□□□ -1.18
PTPN7-209ENST00000477554 A0A1B0GU33 70 aa7.66□□□□□ -1.18
PTPN7-209ENST00000477554 KRTAP6-3Q3LI67 103 aa7.61□□□□□ -1.19
PTPN7-209ENST00000477554 PSPHP1O15172 72 aa7.6□□□□□ -1.19
PTPN7-209ENST00000477554 UQCR11O14957 56 aa7.53□□□□□ -1.2
PTPN7-209ENST00000477554 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
PTPN7-209ENST00000477554 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
PTPN7-209ENST00000477554 LINC01554Q52M75 96 aa7.51□□□□□ -1.21
PTPN7-209ENST00000477554 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
PTPN7-209ENST00000477554 KMT2DO14686 5537 aa7.47□□□□□ -1.21
PTPN7-209ENST00000477554 MT1XP80297 61 aa7.45□□□□□ -1.22
PTPN7-209ENST00000477554 A0A0D9SG42 100 aa7.41□□□□□ -1.22
PTPN7-209ENST00000477554 NEBP20929 6669 aa7.41□□□□□ -1.22
PTPN7-209ENST00000477554 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
PTPN7-209ENST00000477554 A6NED7 52 aa7.39□□□□□ -1.23
PTPN7-209ENST00000477554 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
PTPN7-209ENST00000477554 A8MU10 97 aa7.35□□□□□ -1.23
PTPN7-209ENST00000477554 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
PTPN7-209ENST00000477554 KRTAP5-9P26371 169 aa7.31□□□□□ -1.24
PTPN7-209ENST00000477554 KRTAP12-1P59990 96 aa7.27□□□□□ -1.24
PTPN7-209ENST00000477554 SPINT4Q6UDR6 99 aa7.27□□□□□ -1.24
PTPN7-209ENST00000477554 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
PTPN7-209ENST00000477554 KRTAP12-2P59991 146 aa7.22□□□□□ -1.25
PTPN7-209ENST00000477554 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
PTPN7-209ENST00000477554 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
PTPN7-209ENST00000477554 K7ERS5 55 aa7.18□□□□□ -1.26
PTPN7-209ENST00000477554 KRTAP4-8A0A0G2JLE6 195 aa7.17□□□□□ -1.26
PTPN7-209ENST00000477554 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
PTPN7-209ENST00000477554 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.27
PTPN7-209ENST00000477554 SPRR2FQ96RM1 72 aa7.13□□□□□ -1.27
PTPN7-209ENST00000477554 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
PTPN7-209ENST00000477554 BRK1Q8WUW1 75 aa7.06□□□□□ -1.28
PTPN7-209ENST00000477554 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
PTPN7-209ENST00000477554 KRTAP20-1Q3LI63 56 aa7.01□□□□□ -1.29
PTPN7-209ENST00000477554 SPRR2EP22531 72 aa7.01□□□□□ -1.29
PTPN7-209ENST00000477554 SPRR2BP35325 72 aa7.01□□□□□ -1.29
PTPN7-209ENST00000477554 SPRR2AP35326 72 aa7.01□□□□□ -1.29
PTPN7-209ENST00000477554 LCE1AQ5T7P2 110 aa6.95□□□□□ -1.3
PTPN7-209ENST00000477554 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
PTPN7-209ENST00000477554 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
PTPN7-209ENST00000477554 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
PTPN7-209ENST00000477554 TNP1P09430 55 aa6.79□□□□□ -1.32
PTPN7-209ENST00000477554 ROMO1P60602 79 aa6.77□□□□□ -1.33
PTPN7-209ENST00000477554 SPRR2DP22532 72 aa6.76□□□□□ -1.33
PTPN7-209ENST00000477554 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
PTPN7-209ENST00000477554 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
PTPN7-209ENST00000477554 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
PTPN7-209ENST00000477554 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms