RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 C1orf64Q8NEQ6 169 aa6.4□□□□□ -1.38
TOP3A-205ENST00000477508 H3BPC8 53 aa6.38□□□□□ -1.39
TOP3A-205ENST00000477508 LINC00208Q96KT6 92 aa6.38□□□□□ -1.39
TOP3A-205ENST00000477508 SMIM20Q8N5G0 67 aa6.37□□□□□ -1.39
TOP3A-205ENST00000477508 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
TOP3A-205ENST00000477508 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
TOP3A-205ENST00000477508 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
TOP3A-205ENST00000477508 FAM236AA0A1B0GUQ0 79 aa6.33□□□□□ -1.4
TOP3A-205ENST00000477508 FAM236BA0A1B0GV22 79 aa6.33□□□□□ -1.4
TOP3A-205ENST00000477508 TRAV7A0A075B6U4 112 aa6.31□□□□□ -1.4
TOP3A-205ENST00000477508 S4R3F8 94 aa6.3□□□□□ -1.4
TOP3A-205ENST00000477508 A8MUN3 132 aa6.28□□□□□ -1.4
TOP3A-205ENST00000477508 MT2AP02795 61 aa6.28□□□□□ -1.4
TOP3A-205ENST00000477508 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
TOP3A-205ENST00000477508 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
TOP3A-205ENST00000477508 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
TOP3A-205ENST00000477508 LCA10Q71F78 164 aa6.23□□□□□ -1.41
TOP3A-205ENST00000477508 MT1FP04733 61 aa6.22□□□□□ -1.41
TOP3A-205ENST00000477508 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
TOP3A-205ENST00000477508 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
TOP3A-205ENST00000477508 SERP2Q8N6R1 65 aa6.18□□□□□ -1.42
TOP3A-205ENST00000477508 NDUFC1O43677 76 aa6.17□□□□□ -1.42
TOP3A-205ENST00000477508 DMAC1Q96GE9 116 aa6.14□□□□□ -1.43
TOP3A-205ENST00000477508 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
TOP3A-205ENST00000477508 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
TOP3A-205ENST00000477508 C20orf197Q8N268 126 aa6.1□□□□□ -1.43
TOP3A-205ENST00000477508 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
TOP3A-205ENST00000477508 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
TOP3A-205ENST00000477508 ACYP2P14621 99 aa6.07□□□□□ -1.44
TOP3A-205ENST00000477508 H0YAA0 97 aa6.05□□□□□ -1.44
TOP3A-205ENST00000477508 COX7CP15954 63 aa6.05□□□□□ -1.44
TOP3A-205ENST00000477508 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
TOP3A-205ENST00000477508 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
TOP3A-205ENST00000477508 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
TOP3A-205ENST00000477508 CRIPTQ9P021 101 aa6□□□□□ -1.45
TOP3A-205ENST00000477508 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
TOP3A-205ENST00000477508 USH2AO75445 5202 aa5.99□□□□□ -1.45
TOP3A-205ENST00000477508 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
TOP3A-205ENST00000477508 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
TOP3A-205ENST00000477508 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
TOP3A-205ENST00000477508 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
TOP3A-205ENST00000477508 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
TOP3A-205ENST00000477508 SSPOA2VEC9 5147 aa5.91□□□□□ -1.46
TOP3A-205ENST00000477508 H7BZZ5 65 aa5.89□□□□□ -1.47
TOP3A-205ENST00000477508 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
TOP3A-205ENST00000477508 Q5VV11 94 aa5.85□□□□□ -1.47
TOP3A-205ENST00000477508 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.48
TOP3A-205ENST00000477508 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
TOP3A-205ENST00000477508 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
TOP3A-205ENST00000477508 P0C880 135 aa5.82□□□□□ -1.48
TOP3A-205ENST00000477508 COA5Q86WW8 74 aa5.82□□□□□ -1.48
TOP3A-205ENST00000477508 R4GN34 69 aa5.81□□□□□ -1.48
TOP3A-205ENST00000477508 CCDC179H3BU77 68 aa5.79□□□□□ -1.48
TOP3A-205ENST00000477508 MT1BP07438 61 aa5.78□□□□□ -1.48
TOP3A-205ENST00000477508 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
TOP3A-205ENST00000477508 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
TOP3A-205ENST00000477508 M0QZ58 72 aa5.74□□□□□ -1.49
TOP3A-205ENST00000477508 ATP5EP56381 51 aaPredicted RBP5.74□□□□□ -1.49
TOP3A-205ENST00000477508 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
TOP3A-205ENST00000477508 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
TOP3A-205ENST00000477508 SEC61GP60059 68 aa5.7□□□□□ -1.5
TOP3A-205ENST00000477508 A6NN06 94 aa5.67□□□□□ -1.5
TOP3A-205ENST00000477508 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
TOP3A-205ENST00000477508 SERP1Q9Y6X1 66 aa5.67□□□□□ -1.5
TOP3A-205ENST00000477508 TMEM258P61165 79 aa5.66□□□□□ -1.5
TOP3A-205ENST00000477508 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
TOP3A-205ENST00000477508 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
TOP3A-205ENST00000477508 LINC01554Q52M75 96 aa5.63□□□□□ -1.51
TOP3A-205ENST00000477508 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
TOP3A-205ENST00000477508 A0A1B0GU69 56 aa5.55□□□□□ -1.52
TOP3A-205ENST00000477508 A0A1B0GU33 70 aa5.54□□□□□ -1.52
TOP3A-205ENST00000477508 KRTAP6-3Q3LI67 103 aa5.54□□□□□ -1.52
TOP3A-205ENST00000477508 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
TOP3A-205ENST00000477508 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
TOP3A-205ENST00000477508 MT1XP80297 61 aa5.49□□□□□ -1.53
TOP3A-205ENST00000477508 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
TOP3A-205ENST00000477508 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
TOP3A-205ENST00000477508 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
TOP3A-205ENST00000477508 NEBP20929 6669 aa5.43□□□□□ -1.54
TOP3A-205ENST00000477508 SMIM26A0A096LP01 95 aa5.41□□□□□ -1.54
TOP3A-205ENST00000477508 A0A0D9SG42 100 aa5.4□□□□□ -1.54
TOP3A-205ENST00000477508 CAMK2N1Q7Z7J9 78 aa5.38□□□□□ -1.55
TOP3A-205ENST00000477508 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
TOP3A-205ENST00000477508 V9GYY9 64 aa5.35□□□□□ -1.55
TOP3A-205ENST00000477508 SPINT4Q6UDR6 99 aa5.32□□□□□ -1.56
TOP3A-205ENST00000477508 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
TOP3A-205ENST00000477508 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
TOP3A-205ENST00000477508 UQCR11O14957 56 aa5.3□□□□□ -1.56
TOP3A-205ENST00000477508 Q1T7F1 81 aa5.28□□□□□ -1.56
TOP3A-205ENST00000477508 A8MU10 97 aa5.27□□□□□ -1.57
TOP3A-205ENST00000477508 KRTAP20-1Q3LI63 56 aa5.27□□□□□ -1.57
TOP3A-205ENST00000477508 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
TOP3A-205ENST00000477508 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
TOP3A-205ENST00000477508 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
TOP3A-205ENST00000477508 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
TOP3A-205ENST00000477508 KMT2DO14686 5537 aa5.21□□□□□ -1.58
TOP3A-205ENST00000477508 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
TOP3A-205ENST00000477508 PSPHP1O15172 72 aa5.19□□□□□ -1.58
TOP3A-205ENST00000477508 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
TOP3A-205ENST00000477508 SPRR2FQ96RM1 72 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms