RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 IGKV2D-30A0A075B6S6 120 aa6.99□□□□□ -1.29
PSMB4-204ENST00000476467 UBR4Q5T4S7 5183 aa6.98□□□□□ -1.29
PSMB4-204ENST00000476467 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
PSMB4-204ENST00000476467 CHKB-CPT1BH3BT56 60 aa6.95□□□□□ -1.3
PSMB4-204ENST00000476467 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
PSMB4-204ENST00000476467 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
PSMB4-204ENST00000476467 A8MU10 97 aa6.9□□□□□ -1.3
PSMB4-204ENST00000476467 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
PSMB4-204ENST00000476467 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
PSMB4-204ENST00000476467 A6NED7 52 aa6.86□□□□□ -1.31
PSMB4-204ENST00000476467 LCA10Q71F78 164 aa6.86□□□□□ -1.31
PSMB4-204ENST00000476467 A6NN06 94 aa6.85□□□□□ -1.31
PSMB4-204ENST00000476467 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
PSMB4-204ENST00000476467 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
PSMB4-204ENST00000476467 SPINK7P58062 85 aa6.85□□□□□ -1.31
PSMB4-204ENST00000476467 MUC2Q02817 5179 aa6.79□□□□□ -1.32
PSMB4-204ENST00000476467 A0A1B0GU69 56 aa6.75□□□□□ -1.33
PSMB4-204ENST00000476467 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
PSMB4-204ENST00000476467 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
PSMB4-204ENST00000476467 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
PSMB4-204ENST00000476467 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
PSMB4-204ENST00000476467 FAT4Q6V0I7 4981 aa6.63□□□□□ -1.35
PSMB4-204ENST00000476467 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
PSMB4-204ENST00000476467 UQCR11O14957 56 aa6.62□□□□□ -1.35
PSMB4-204ENST00000476467 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
PSMB4-204ENST00000476467 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
PSMB4-204ENST00000476467 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
PSMB4-204ENST00000476467 MT1HP80294 61 aa6.53□□□□□ -1.36
PSMB4-204ENST00000476467 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
PSMB4-204ENST00000476467 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
PSMB4-204ENST00000476467 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
PSMB4-204ENST00000476467 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
PSMB4-204ENST00000476467 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
PSMB4-204ENST00000476467 S4R3F8 94 aa6.45□□□□□ -1.38
PSMB4-204ENST00000476467 A0A1B0GU33 70 aa6.45□□□□□ -1.38
PSMB4-204ENST00000476467 H0YAA0 97 aa6.45□□□□□ -1.38
PSMB4-204ENST00000476467 M0R2T5 61 aa6.44□□□□□ -1.38
PSMB4-204ENST00000476467 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
PSMB4-204ENST00000476467 KRTAP10-6P60371 365 aaPredicted RBP6.35□□□□□ -1.39
PSMB4-204ENST00000476467 CSAG1Q6PB30 78 aa6.34□□□□□ -1.4
PSMB4-204ENST00000476467 H3BS24 57 aa6.32□□□□□ -1.4
PSMB4-204ENST00000476467 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
PSMB4-204ENST00000476467 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
PSMB4-204ENST00000476467 KRTAP9-8Q9BYQ0 159 aa6.24□□□□□ -1.41
PSMB4-204ENST00000476467 P0C880 135 aa6.23□□□□□ -1.41
PSMB4-204ENST00000476467 MT2AP02795 61 aa6.21□□□□□ -1.42
PSMB4-204ENST00000476467 K7ERS5 55 aa6.17□□□□□ -1.42
PSMB4-204ENST00000476467 MT1FP04733 61 aa6.16□□□□□ -1.42
PSMB4-204ENST00000476467 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
PSMB4-204ENST00000476467 A0A0D9SG42 100 aa6.13□□□□□ -1.43
PSMB4-204ENST00000476467 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
PSMB4-204ENST00000476467 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
PSMB4-204ENST00000476467 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
PSMB4-204ENST00000476467 ROMO1P60602 79 aa6.07□□□□□ -1.44
PSMB4-204ENST00000476467 M0QZ58 72 aa6.04□□□□□ -1.44
PSMB4-204ENST00000476467 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
PSMB4-204ENST00000476467 KRTAP12-2P59991 146 aa6.02□□□□□ -1.45
PSMB4-204ENST00000476467 CRIPTQ9P021 101 aa6.01□□□□□ -1.45
PSMB4-204ENST00000476467 KRTAP12-1P59990 96 aa6□□□□□ -1.45
PSMB4-204ENST00000476467 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
PSMB4-204ENST00000476467 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
PSMB4-204ENST00000476467 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
PSMB4-204ENST00000476467 R4GN34 69 aa5.92□□□□□ -1.46
PSMB4-204ENST00000476467 LCE2BO14633 110 aa5.9□□□□□ -1.47
PSMB4-204ENST00000476467 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
PSMB4-204ENST00000476467 USH2AO75445 5202 aa5.81□□□□□ -1.48
PSMB4-204ENST00000476467 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
PSMB4-204ENST00000476467 MT1BP07438 61 aa5.77□□□□□ -1.49
PSMB4-204ENST00000476467 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
PSMB4-204ENST00000476467 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
PSMB4-204ENST00000476467 SSPOA2VEC9 5147 aa5.66□□□□□ -1.5
PSMB4-204ENST00000476467 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
PSMB4-204ENST00000476467 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
PSMB4-204ENST00000476467 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
PSMB4-204ENST00000476467 NDUFAF8A1L188 74 aa5.6□□□□□ -1.51
PSMB4-204ENST00000476467 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
PSMB4-204ENST00000476467 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
PSMB4-204ENST00000476467 MT1XP80297 61 aa5.52□□□□□ -1.53
PSMB4-204ENST00000476467 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
PSMB4-204ENST00000476467 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
PSMB4-204ENST00000476467 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
PSMB4-204ENST00000476467 KRTAP4-6Q9BYQ5 205 aa5.44□□□□□ -1.54
PSMB4-204ENST00000476467 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
PSMB4-204ENST00000476467 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.54
PSMB4-204ENST00000476467 TNP1P09430 55 aa5.37□□□□□ -1.55
PSMB4-204ENST00000476467 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
PSMB4-204ENST00000476467 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
PSMB4-204ENST00000476467 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
PSMB4-204ENST00000476467 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
PSMB4-204ENST00000476467 MACF1Q9UPN3 7388 aaKnown RBP5.25□□□□□ -1.57
PSMB4-204ENST00000476467 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
PSMB4-204ENST00000476467 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
PSMB4-204ENST00000476467 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
PSMB4-204ENST00000476467 KRTAP4-8Q9BYQ9 185 aa5.12□□□□□ -1.59
PSMB4-204ENST00000476467 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
PSMB4-204ENST00000476467 KMT2DO14686 5537 aa5.12□□□□□ -1.59
PSMB4-204ENST00000476467 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
PSMB4-204ENST00000476467 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
PSMB4-204ENST00000476467 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
PSMB4-204ENST00000476467 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms