RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 CCDC179H3BU77 68 aa6.34□□□□□ -1.39
HLA-F-224ENST00000475996 MT1HP80294 61 aa6.34□□□□□ -1.39
HLA-F-224ENST00000475996 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.39
HLA-F-224ENST00000475996 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
HLA-F-224ENST00000475996 M0R2T5 61 aa6.28□□□□□ -1.4
HLA-F-224ENST00000475996 A8MUN3 132 aa6.26□□□□□ -1.41
HLA-F-224ENST00000475996 H7BZZ5 65 aa6.25□□□□□ -1.41
HLA-F-224ENST00000475996 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
HLA-F-224ENST00000475996 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
HLA-F-224ENST00000475996 NDUFC1O43677 76 aa6.25□□□□□ -1.41
HLA-F-224ENST00000475996 S4R3F8 94 aa6.25□□□□□ -1.41
HLA-F-224ENST00000475996 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
HLA-F-224ENST00000475996 LCA10Q71F78 164 aa6.21□□□□□ -1.42
HLA-F-224ENST00000475996 ACYP2P14621 99 aa6.19□□□□□ -1.42
HLA-F-224ENST00000475996 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
HLA-F-224ENST00000475996 KRTAP10-6P60371 365 aaPredicted RBP6.15□□□□□ -1.42
HLA-F-224ENST00000475996 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
HLA-F-224ENST00000475996 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
HLA-F-224ENST00000475996 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
HLA-F-224ENST00000475996 CHKB-CPT1BH3BT56 60 aa6.09□□□□□ -1.43
HLA-F-224ENST00000475996 COA5Q86WW8 74 aa6.09□□□□□ -1.44
HLA-F-224ENST00000475996 TMEM258P61165 79 aa6.07□□□□□ -1.44
HLA-F-224ENST00000475996 ATP5EP56381 51 aaPredicted RBP6.05□□□□□ -1.44
HLA-F-224ENST00000475996 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
HLA-F-224ENST00000475996 MT2AP02795 61 aa6.02□□□□□ -1.45
HLA-F-224ENST00000475996 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
HLA-F-224ENST00000475996 MT1FP04733 61 aa5.99□□□□□ -1.45
HLA-F-224ENST00000475996 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
HLA-F-224ENST00000475996 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
HLA-F-224ENST00000475996 H0YAA0 97 aa5.92□□□□□ -1.46
HLA-F-224ENST00000475996 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
HLA-F-224ENST00000475996 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
HLA-F-224ENST00000475996 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
HLA-F-224ENST00000475996 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
HLA-F-224ENST00000475996 P0C880 135 aa5.87□□□□□ -1.47
HLA-F-224ENST00000475996 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
HLA-F-224ENST00000475996 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
HLA-F-224ENST00000475996 KRTAP9-3Q9BYQ3 159 aa5.85□□□□□ -1.47
HLA-F-224ENST00000475996 SEC61GP60059 68 aa5.79□□□□□ -1.48
HLA-F-224ENST00000475996 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
HLA-F-224ENST00000475996 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
HLA-F-224ENST00000475996 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
HLA-F-224ENST00000475996 A0A1B0GU69 56 aa5.74□□□□□ -1.49
HLA-F-224ENST00000475996 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
HLA-F-224ENST00000475996 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
HLA-F-224ENST00000475996 R4GN34 69 aa5.74□□□□□ -1.49
HLA-F-224ENST00000475996 M0QZ58 72 aa5.73□□□□□ -1.49
HLA-F-224ENST00000475996 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.5
HLA-F-224ENST00000475996 SMIM26A0A096LP01 95 aa5.69□□□□□ -1.5
HLA-F-224ENST00000475996 USH2AO75445 5202 aa5.68□□□□□ -1.5
HLA-F-224ENST00000475996 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
HLA-F-224ENST00000475996 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
HLA-F-224ENST00000475996 A0A1B0GU33 70 aa5.65□□□□□ -1.5
HLA-F-224ENST00000475996 Q1T7F1 81 aa5.64□□□□□ -1.51
HLA-F-224ENST00000475996 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
HLA-F-224ENST00000475996 V9GYY9 64 aa5.64□□□□□ -1.51
HLA-F-224ENST00000475996 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
HLA-F-224ENST00000475996 Q5VV11 94 aa5.62□□□□□ -1.51
HLA-F-224ENST00000475996 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
HLA-F-224ENST00000475996 PSPHP1O15172 72 aa5.6□□□□□ -1.51
HLA-F-224ENST00000475996 MT1BP07438 61 aa5.6□□□□□ -1.51
HLA-F-224ENST00000475996 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
HLA-F-224ENST00000475996 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
HLA-F-224ENST00000475996 A0A0D9SG42 100 aa5.55□□□□□ -1.52
HLA-F-224ENST00000475996 SSPOA2VEC9 5147 aa5.54□□□□□ -1.52
HLA-F-224ENST00000475996 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
HLA-F-224ENST00000475996 UQCR11O14957 56 aa5.51□□□□□ -1.53
HLA-F-224ENST00000475996 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
HLA-F-224ENST00000475996 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
HLA-F-224ENST00000475996 A8MU10 97 aa5.49□□□□□ -1.53
HLA-F-224ENST00000475996 A6NN06 94 aa5.47□□□□□ -1.53
HLA-F-224ENST00000475996 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
HLA-F-224ENST00000475996 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
HLA-F-224ENST00000475996 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
HLA-F-224ENST00000475996 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
HLA-F-224ENST00000475996 A6NED7 52 aa5.43□□□□□ -1.54
HLA-F-224ENST00000475996 KRTAP4-9Q9BYQ8 210 aa5.42□□□□□ -1.54
HLA-F-224ENST00000475996 KRTAP12-1P59990 96 aa5.41□□□□□ -1.54
HLA-F-224ENST00000475996 KRTAP12-2P59991 146 aa5.39□□□□□ -1.55
HLA-F-224ENST00000475996 KRTAP4-2Q9BYR5 136 aa5.38□□□□□ -1.55
HLA-F-224ENST00000475996 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
HLA-F-224ENST00000475996 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
HLA-F-224ENST00000475996 MT1XP80297 61 aa5.35□□□□□ -1.55
HLA-F-224ENST00000475996 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
HLA-F-224ENST00000475996 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
HLA-F-224ENST00000475996 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
HLA-F-224ENST00000475996 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
HLA-F-224ENST00000475996 PRAC1Q96KF2 57 aa5.26□□□□□ -1.57
HLA-F-224ENST00000475996 CDC42SE1Q9NRR8 79 aa5.26□□□□□ -1.57
HLA-F-224ENST00000475996 K7ERS5 55 aa5.23□□□□□ -1.57
HLA-F-224ENST00000475996 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
HLA-F-224ENST00000475996 BRK1Q8WUW1 75 aa5.15□□□□□ -1.58
HLA-F-224ENST00000475996 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
HLA-F-224ENST00000475996 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
HLA-F-224ENST00000475996 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
HLA-F-224ENST00000475996 KMT2DO14686 5537 aa5.08□□□□□ -1.6
HLA-F-224ENST00000475996 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
HLA-F-224ENST00000475996 TNP1P09430 55 aa5.02□□□□□ -1.61
HLA-F-224ENST00000475996 ROMO1P60602 79 aa4.97□□□□□ -1.61
HLA-F-224ENST00000475996 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms