RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 A8MUN3 132 aa4.48□□□□□ -1.69
SMG5-203ENST00000473643 NDUFC1O43677 76 aa4.47□□□□□ -1.69
SMG5-203ENST00000473643 SPANXA2-OT1Q8N9U9 137 aa4.47□□□□□ -1.69
SMG5-203ENST00000473643 CCDC179H3BU77 68 aa4.46□□□□□ -1.7
SMG5-203ENST00000473643 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
SMG5-203ENST00000473643 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
SMG5-203ENST00000473643 H7BZZ5 65 aa4.44□□□□□ -1.7
SMG5-203ENST00000473643 CYSTM1Q9H1C7 97 aa4.44□□□□□ -1.7
SMG5-203ENST00000473643 USH2AO75445 5202 aa4.43□□□□□ -1.7
SMG5-203ENST00000473643 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
SMG5-203ENST00000473643 ACYP2P14621 99 aa4.39□□□□□ -1.71
SMG5-203ENST00000473643 S4R3F8 94 aa4.39□□□□□ -1.71
SMG5-203ENST00000473643 LCA10Q71F78 164 aa4.38□□□□□ -1.71
SMG5-203ENST00000473643 KRTAP3-3Q9BYR6 98 aa4.38□□□□□ -1.71
SMG5-203ENST00000473643 MT2AP02795 61 aa4.36□□□□□ -1.71
SMG5-203ENST00000473643 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
SMG5-203ENST00000473643 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
SMG5-203ENST00000473643 CSAG1Q6PB30 78 aa4.35□□□□□ -1.71
SMG5-203ENST00000473643 MT1FP04733 61 aa4.33□□□□□ -1.72
SMG5-203ENST00000473643 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
SMG5-203ENST00000473643 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
SMG5-203ENST00000473643 TMEM258P61165 79 aa4.32□□□□□ -1.72
SMG5-203ENST00000473643 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
SMG5-203ENST00000473643 KRTAP10-10P60014 251 aa4.29□□□□□ -1.72
SMG5-203ENST00000473643 CHKB-CPT1BH3BT56 60 aa4.28□□□□□ -1.72
SMG5-203ENST00000473643 LCE2BO14633 110 aa4.28□□□□□ -1.72
SMG5-203ENST00000473643 COA5Q86WW8 74 aa4.28□□□□□ -1.72
SMG5-203ENST00000473643 SPTSSBQ8NFR3 76 aa4.27□□□□□ -1.73
SMG5-203ENST00000473643 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
SMG5-203ENST00000473643 H0YAA0 97 aa4.26□□□□□ -1.73
SMG5-203ENST00000473643 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
SMG5-203ENST00000473643 KRTAP19-1Q8IUB9 90 aa4.18□□□□□ -1.74
SMG5-203ENST00000473643 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
SMG5-203ENST00000473643 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
SMG5-203ENST00000473643 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
SMG5-203ENST00000473643 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
SMG5-203ENST00000473643 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
SMG5-203ENST00000473643 P0C880 135 aa4.13□□□□□ -1.75
SMG5-203ENST00000473643 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
SMG5-203ENST00000473643 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
SMG5-203ENST00000473643 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
SMG5-203ENST00000473643 SEC61GP60059 68 aa4.09□□□□□ -1.75
SMG5-203ENST00000473643 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
SMG5-203ENST00000473643 SMIM26A0A096LP01 95 aa4.08□□□□□ -1.76
SMG5-203ENST00000473643 A0A1B0GU69 56 aa4.06□□□□□ -1.76
SMG5-203ENST00000473643 M0QZ58 72 aa4.04□□□□□ -1.76
SMG5-203ENST00000473643 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
SMG5-203ENST00000473643 R4GN34 69 aa4.04□□□□□ -1.76
SMG5-203ENST00000473643 Q1T7F1 81 aa4.03□□□□□ -1.76
SMG5-203ENST00000473643 V9GYY9 64 aa4.03□□□□□ -1.76
SMG5-203ENST00000473643 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
SMG5-203ENST00000473643 A0A1B0GU33 70 aa4.01□□□□□ -1.77
SMG5-203ENST00000473643 Q5VV11 94 aa4□□□□□ -1.77
SMG5-203ENST00000473643 MT1BP07438 61 aa3.98□□□□□ -1.77
SMG5-203ENST00000473643 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
SMG5-203ENST00000473643 A6NN06 94 aa3.93□□□□□ -1.78
SMG5-203ENST00000473643 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
SMG5-203ENST00000473643 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
SMG5-203ENST00000473643 PSPHP1O15172 72 aa3.92□□□□□ -1.78
SMG5-203ENST00000473643 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
SMG5-203ENST00000473643 NEBP20929 6669 aa3.92□□□□□ -1.78
SMG5-203ENST00000473643 UQCR11O14957 56 aa3.91□□□□□ -1.78
SMG5-203ENST00000473643 MUC12Q9UKN1 5478 aa3.91□□□□□ -1.78
SMG5-203ENST00000473643 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
SMG5-203ENST00000473643 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
SMG5-203ENST00000473643 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
SMG5-203ENST00000473643 A0A0D9SG42 100 aa3.85□□□□□ -1.79
SMG5-203ENST00000473643 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
SMG5-203ENST00000473643 A8MU10 97 aa3.84□□□□□ -1.79
SMG5-203ENST00000473643 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
SMG5-203ENST00000473643 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
SMG5-203ENST00000473643 KMT2DO14686 5537 aa3.81□□□□□ -1.8
SMG5-203ENST00000473643 A6NED7 52 aa3.8□□□□□ -1.8
SMG5-203ENST00000473643 KRTAP12-2P59991 146 aa3.8□□□□□ -1.8
SMG5-203ENST00000473643 MT1XP80297 61 aa3.79□□□□□ -1.8
SMG5-203ENST00000473643 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
SMG5-203ENST00000473643 MDN1Q9NU22 5596 aa3.77□□□□□ -1.81
SMG5-203ENST00000473643 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
SMG5-203ENST00000473643 PRO2289Q9P1D8 64 aa3.77□□□□□ -1.81
SMG5-203ENST00000473643 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
SMG5-203ENST00000473643 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
SMG5-203ENST00000473643 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
SMG5-203ENST00000473643 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
SMG5-203ENST00000473643 K7ERS5 55 aa3.7□□□□□ -1.82
SMG5-203ENST00000473643 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
SMG5-203ENST00000473643 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
SMG5-203ENST00000473643 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
SMG5-203ENST00000473643 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
SMG5-203ENST00000473643 KRTAP8-1Q8IUC2 63 aa3.59□□□□□ -1.83
SMG5-203ENST00000473643 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
SMG5-203ENST00000473643 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
SMG5-203ENST00000473643 TNP1P09430 55 aa3.56□□□□□ -1.84
SMG5-203ENST00000473643 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
SMG5-203ENST00000473643 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
SMG5-203ENST00000473643 SPRR2EP22531 72 aa3.54□□□□□ -1.84
SMG5-203ENST00000473643 SPRR2BP35325 72 aa3.54□□□□□ -1.84
SMG5-203ENST00000473643 SPRR2AP35326 72 aa3.54□□□□□ -1.84
SMG5-203ENST00000473643 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
SMG5-203ENST00000473643 ROMO1P60602 79 aa3.53□□□□□ -1.84
SMG5-203ENST00000473643 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 424 ms