RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
PTPRE-207ENST00000471218 C4orf26Q17RF5 130 aa4.69□□□□□ -1.66
PTPRE-207ENST00000471218 V9GYY9 64 aa4.69□□□□□ -1.66
PTPRE-207ENST00000471218 SPTSSBQ8NFR3 76 aa4.68□□□□□ -1.66
PTPRE-207ENST00000471218 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
PTPRE-207ENST00000471218 CHKB-CPT1BH3BT56 60 aa4.67□□□□□ -1.66
PTPRE-207ENST00000471218 M0R2T5 61 aa4.67□□□□□ -1.66
PTPRE-207ENST00000471218 MT1HP80294 61 aa4.67□□□□□ -1.66
PTPRE-207ENST00000471218 LCE2CQ5TA81 110 aa4.67□□□□□ -1.66
PTPRE-207ENST00000471218 KRTAP3-1Q9BYR8 98 aa4.64□□□□□ -1.67
PTPRE-207ENST00000471218 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
PTPRE-207ENST00000471218 Q1T7F1 81 aa4.63□□□□□ -1.67
PTPRE-207ENST00000471218 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
PTPRE-207ENST00000471218 KRTAP19-2Q3LHN2 52 aa4.62□□□□□ -1.67
PTPRE-207ENST00000471218 H1FX-AS1Q4G0G2 97 aa4.62□□□□□ -1.67
PTPRE-207ENST00000471218 LINC01558Q9Y6Z2 57 aa4.58□□□□□ -1.68
PTPRE-207ENST00000471218 S4R3F8 94 aa4.56□□□□□ -1.68
PTPRE-207ENST00000471218 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
PTPRE-207ENST00000471218 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
PTPRE-207ENST00000471218 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
PTPRE-207ENST00000471218 SEC61GP60059 68 aa4.51□□□□□ -1.69
PTPRE-207ENST00000471218 LCA10Q71F78 164 aa4.51□□□□□ -1.69
PTPRE-207ENST00000471218 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
PTPRE-207ENST00000471218 A0A1B0GU69 56 aa4.48□□□□□ -1.69
PTPRE-207ENST00000471218 H0YAA0 97 aa4.48□□□□□ -1.69
PTPRE-207ENST00000471218 KRTAP3-3Q9BYR6 98 aa4.48□□□□□ -1.69
PTPRE-207ENST00000471218 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
PTPRE-207ENST00000471218 Q5VV11 94 aa4.44□□□□□ -1.7
PTPRE-207ENST00000471218 PSPHP1O15172 72 aa4.42□□□□□ -1.7
PTPRE-207ENST00000471218 UQCR11O14957 56 aa4.39□□□□□ -1.71
PTPRE-207ENST00000471218 USH2AO75445 5202 aa4.39□□□□□ -1.71
PTPRE-207ENST00000471218 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
PTPRE-207ENST00000471218 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
PTPRE-207ENST00000471218 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
PTPRE-207ENST00000471218 A6NED7 52 aa4.35□□□□□ -1.71
PTPRE-207ENST00000471218 A0A1B0GU33 70 aa4.34□□□□□ -1.71
PTPRE-207ENST00000471218 KRTAP3-2Q9BYR7 98 aa4.34□□□□□ -1.71
PTPRE-207ENST00000471218 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
PTPRE-207ENST00000471218 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
PTPRE-207ENST00000471218 M0QZ58 72 aa4.32□□□□□ -1.72
PTPRE-207ENST00000471218 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
PTPRE-207ENST00000471218 SPATA8Q6RVD6 105 aa4.31□□□□□ -1.72
PTPRE-207ENST00000471218 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
PTPRE-207ENST00000471218 CRIPTQ9P021 101 aa4.31□□□□□ -1.72
PTPRE-207ENST00000471218 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
PTPRE-207ENST00000471218 MIR22HGQ0VDD5 57 aa4.29□□□□□ -1.72
PTPRE-207ENST00000471218 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
PTPRE-207ENST00000471218 MT2AP02795 61 aa4.28□□□□□ -1.72
PTPRE-207ENST00000471218 P0C880 135 aa4.27□□□□□ -1.73
PTPRE-207ENST00000471218 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
PTPRE-207ENST00000471218 PRO0628Q9UI54 55 aa4.27□□□□□ -1.73
PTPRE-207ENST00000471218 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
PTPRE-207ENST00000471218 LCE2BO14633 110 aa4.24□□□□□ -1.73
PTPRE-207ENST00000471218 MT1FP04733 61 aa4.23□□□□□ -1.73
PTPRE-207ENST00000471218 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
PTPRE-207ENST00000471218 R4GN34 69 aa4.21□□□□□ -1.74
PTPRE-207ENST00000471218 A6NN06 94 aa4.19□□□□□ -1.74
PTPRE-207ENST00000471218 K7ERS5 55 aa4.18□□□□□ -1.74
PTPRE-207ENST00000471218 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
PTPRE-207ENST00000471218 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
PTPRE-207ENST00000471218 SPRR2GQ9BYE4 73 aa4.13□□□□□ -1.75
PTPRE-207ENST00000471218 A8MU10 97 aa4.11□□□□□ -1.75
PTPRE-207ENST00000471218 A0A0D9SG42 100 aa4.07□□□□□ -1.76
PTPRE-207ENST00000471218 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
PTPRE-207ENST00000471218 NEBP20929 6669 aa4.06□□□□□ -1.76
PTPRE-207ENST00000471218 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
PTPRE-207ENST00000471218 LINC01554Q52M75 96 aa4.03□□□□□ -1.76
PTPRE-207ENST00000471218 KRTAP19-8Q3LI54 63 aa4.02□□□□□ -1.77
PTPRE-207ENST00000471218 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
PTPRE-207ENST00000471218 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
PTPRE-207ENST00000471218 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
PTPRE-207ENST00000471218 PLAC4Q8WY50 150 aa3.97□□□□□ -1.77
PTPRE-207ENST00000471218 ROMO1P60602 79 aa3.95□□□□□ -1.78
PTPRE-207ENST00000471218 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
PTPRE-207ENST00000471218 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
PTPRE-207ENST00000471218 CAMK2N1Q7Z7J9 78 aa3.93□□□□□ -1.78
PTPRE-207ENST00000471218 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
PTPRE-207ENST00000471218 MT1BP07438 61 aa3.88□□□□□ -1.79
PTPRE-207ENST00000471218 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
PTPRE-207ENST00000471218 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
PTPRE-207ENST00000471218 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
PTPRE-207ENST00000471218 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
PTPRE-207ENST00000471218 PRO2289Q9P1D8 64 aa3.84□□□□□ -1.79
PTPRE-207ENST00000471218 KMT2DO14686 5537 aa3.83□□□□□ -1.8
PTPRE-207ENST00000471218 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
PTPRE-207ENST00000471218 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
PTPRE-207ENST00000471218 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
PTPRE-207ENST00000471218 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
PTPRE-207ENST00000471218 TNP1P09430 55 aa3.79□□□□□ -1.8
PTPRE-207ENST00000471218 MT1XP80297 61 aa3.77□□□□□ -1.81
PTPRE-207ENST00000471218 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
PTPRE-207ENST00000471218 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
PTPRE-207ENST00000471218 SPRR2EP22531 72 aa3.69□□□□□ -1.82
PTPRE-207ENST00000471218 SPRR2BP35325 72 aa3.69□□□□□ -1.82
PTPRE-207ENST00000471218 SPRR2AP35326 72 aa3.69□□□□□ -1.82
PTPRE-207ENST00000471218 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
PTPRE-207ENST00000471218 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
PTPRE-207ENST00000471218 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
PTPRE-207ENST00000471218 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
PTPRE-207ENST00000471218 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms