RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
COL16A1-209ENST00000470799 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
COL16A1-209ENST00000470799 RPS28P62857 69 aaKnown RBP8.04□□□□□ -1.12
COL16A1-209ENST00000470799 SERP1Q9Y6X1 66 aa8.04□□□□□ -1.12
COL16A1-209ENST00000470799 DMAC1Q96GE9 116 aa8.03□□□□□ -1.12
COL16A1-209ENST00000470799 A8MUN3 132 aa8.02□□□□□ -1.13
COL16A1-209ENST00000470799 ACYP2P14621 99 aa8.01□□□□□ -1.13
COL16A1-209ENST00000470799 C4orf26Q17RF5 130 aa8.01□□□□□ -1.13
COL16A1-209ENST00000470799 MPLKIPQ8TAP9 179 aa7.97□□□□□ -1.13
COL16A1-209ENST00000470799 KRTAP9-8Q9BYQ0 159 aa7.94□□□□□ -1.14
COL16A1-209ENST00000470799 COA5Q86WW8 74 aa7.92□□□□□ -1.14
COL16A1-209ENST00000470799 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
COL16A1-209ENST00000470799 MT2AP02795 61 aa7.85□□□□□ -1.15
COL16A1-209ENST00000470799 CHKB-CPT1BH3BT56 60 aa7.84□□□□□ -1.15
COL16A1-209ENST00000470799 KRTAP10-10P60014 251 aa7.84□□□□□ -1.15
COL16A1-209ENST00000470799 SMIM26A0A096LP01 95 aa7.83□□□□□ -1.16
COL16A1-209ENST00000470799 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
COL16A1-209ENST00000470799 MT1FP04733 61 aa7.79□□□□□ -1.16
COL16A1-209ENST00000470799 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
COL16A1-209ENST00000470799 S4R3F8 94 aa7.71□□□□□ -1.18
COL16A1-209ENST00000470799 V9GYY9 64 aa7.71□□□□□ -1.18
COL16A1-209ENST00000470799 KRTAP9-3Q9BYQ3 159 aa7.69□□□□□ -1.18
COL16A1-209ENST00000470799 USH2AO75445 5202 aa7.69□□□□□ -1.18
COL16A1-209ENST00000470799 Q1T7F1 81 aa7.68□□□□□ -1.18
COL16A1-209ENST00000470799 LCE2BO14633 110 aa7.66□□□□□ -1.18
COL16A1-209ENST00000470799 LCA10Q71F78 164 aa7.66□□□□□ -1.18
COL16A1-209ENST00000470799 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
COL16A1-209ENST00000470799 LINC01558Q9Y6Z2 57 aa7.64□□□□□ -1.19
COL16A1-209ENST00000470799 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
COL16A1-209ENST00000470799 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
COL16A1-209ENST00000470799 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
COL16A1-209ENST00000470799 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
COL16A1-209ENST00000470799 SEC61GP60059 68 aa7.52□□□□□ -1.21
COL16A1-209ENST00000470799 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
COL16A1-209ENST00000470799 A0A1B0GU69 56 aa7.51□□□□□ -1.21
COL16A1-209ENST00000470799 KRTAP9-7A8MTY7 169 aa7.49□□□□□ -1.21
COL16A1-209ENST00000470799 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
COL16A1-209ENST00000470799 PSPHP1O15172 72 aa7.47□□□□□ -1.21
COL16A1-209ENST00000470799 H0YAA0 97 aa7.44□□□□□ -1.22
COL16A1-209ENST00000470799 Q5VV11 94 aa7.44□□□□□ -1.22
COL16A1-209ENST00000470799 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
COL16A1-209ENST00000470799 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
COL16A1-209ENST00000470799 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
COL16A1-209ENST00000470799 A0A1B0GU33 70 aa7.31□□□□□ -1.24
COL16A1-209ENST00000470799 UQCR11O14957 56 aa7.3□□□□□ -1.24
COL16A1-209ENST00000470799 MACF1Q9UPN3 7388 aaKnown RBP7.3□□□□□ -1.24
COL16A1-209ENST00000470799 A6NED7 52 aa7.28□□□□□ -1.24
COL16A1-209ENST00000470799 P0C880 135 aa7.28□□□□□ -1.24
COL16A1-209ENST00000470799 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
COL16A1-209ENST00000470799 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
COL16A1-209ENST00000470799 M0QZ58 72 aa7.19□□□□□ -1.26
COL16A1-209ENST00000470799 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
COL16A1-209ENST00000470799 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
COL16A1-209ENST00000470799 SPRR2GQ9BYE4 73 aa7.16□□□□□ -1.26
COL16A1-209ENST00000470799 CRIPTQ9P021 101 aa7.15□□□□□ -1.26
COL16A1-209ENST00000470799 A6NN06 94 aa7.14□□□□□ -1.27
COL16A1-209ENST00000470799 BRK1Q8WUW1 75 aa7.14□□□□□ -1.27
COL16A1-209ENST00000470799 MT1BP07438 61 aa7.12□□□□□ -1.27
COL16A1-209ENST00000470799 R4GN34 69 aa7.11□□□□□ -1.27
COL16A1-209ENST00000470799 KRTAP19-8Q3LI54 63 aa7.1□□□□□ -1.27
COL16A1-209ENST00000470799 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
COL16A1-209ENST00000470799 KRTAP6-3Q3LI67 103 aa7.06□□□□□ -1.28
COL16A1-209ENST00000470799 A8MU10 97 aa7.01□□□□□ -1.29
COL16A1-209ENST00000470799 PRO0628Q9UI54 55 aa7.01□□□□□ -1.29
COL16A1-209ENST00000470799 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
COL16A1-209ENST00000470799 A0A0D9SG42 100 aa6.97□□□□□ -1.29
COL16A1-209ENST00000470799 K7ERS5 55 aa6.92□□□□□ -1.3
COL16A1-209ENST00000470799 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
COL16A1-209ENST00000470799 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
COL16A1-209ENST00000470799 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
COL16A1-209ENST00000470799 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
COL16A1-209ENST00000470799 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
COL16A1-209ENST00000470799 NEBP20929 6669 aa6.8□□□□□ -1.32
COL16A1-209ENST00000470799 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
COL16A1-209ENST00000470799 PMAIP1Q13794 54 aa6.79□□□□□ -1.32
COL16A1-209ENST00000470799 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
COL16A1-209ENST00000470799 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
COL16A1-209ENST00000470799 MT1XP80297 61 aa6.68□□□□□ -1.34
COL16A1-209ENST00000470799 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
COL16A1-209ENST00000470799 KMT2DO14686 5537 aa6.62□□□□□ -1.35
COL16A1-209ENST00000470799 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
COL16A1-209ENST00000470799 ROMO1P60602 79 aa6.59□□□□□ -1.35
COL16A1-209ENST00000470799 KRTAP20-1Q3LI63 56 aa6.59□□□□□ -1.35
COL16A1-209ENST00000470799 SPRR2FQ96RM1 72 aa6.58□□□□□ -1.36
COL16A1-209ENST00000470799 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
COL16A1-209ENST00000470799 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
COL16A1-209ENST00000470799 SPRR2EP22531 72 aa6.49□□□□□ -1.37
COL16A1-209ENST00000470799 SPRR2BP35325 72 aa6.49□□□□□ -1.37
COL16A1-209ENST00000470799 SPRR2AP35326 72 aa6.49□□□□□ -1.37
COL16A1-209ENST00000470799 KTN1-AS1Q86SY8 53 aa6.48□□□□□ -1.37
COL16A1-209ENST00000470799 KRTAP4-8A0A0G2JLE6 195 aa6.42□□□□□ -1.38
COL16A1-209ENST00000470799 KRTAP4-8Q9BYQ9 185 aa6.42□□□□□ -1.38
COL16A1-209ENST00000470799 KRTAP2-3P0C7H8 128 aa6.4□□□□□ -1.38
COL16A1-209ENST00000470799 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
COL16A1-209ENST00000470799 KRTAP2-4Q9BYR9 128 aa6.4□□□□□ -1.38
COL16A1-209ENST00000470799 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
COL16A1-209ENST00000470799 TNP1P09430 55 aa6.35□□□□□ -1.39
COL16A1-209ENST00000470799 KRTAP10-12P60413 245 aa6.34□□□□□ -1.39
COL16A1-209ENST00000470799 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
COL16A1-209ENST00000470799 PRAC1Q96KF2 57 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms