RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
HDLBP-233ENST00000470710 TMEM258P61165 79 aa4.44□□□□□ -1.7
HDLBP-233ENST00000470710 C4orf26Q17RF5 130 aa4.44□□□□□ -1.7
HDLBP-233ENST00000470710 ATP5EP56381 51 aaPredicted RBP4.43□□□□□ -1.7
HDLBP-233ENST00000470710 COX6B2Q6YFQ2 88 aa4.43□□□□□ -1.7
HDLBP-233ENST00000470710 A8MUN3 132 aa4.42□□□□□ -1.7
HDLBP-233ENST00000470710 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
HDLBP-233ENST00000470710 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
HDLBP-233ENST00000470710 RBM12B-AS1Q9P1G2 102 aa4.42□□□□□ -1.7
HDLBP-233ENST00000470710 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
HDLBP-233ENST00000470710 FAM236DA0A1B0GTK5 79 aa4.4□□□□□ -1.71
HDLBP-233ENST00000470710 FAM236CP0DP71 79 aa4.4□□□□□ -1.71
HDLBP-233ENST00000470710 KRTAP3-1Q9BYR8 98 aa4.4□□□□□ -1.71
HDLBP-233ENST00000470710 MUC2Q02817 5179 aa4.38□□□□□ -1.71
HDLBP-233ENST00000470710 ACYP2P14621 99 aa4.37□□□□□ -1.71
HDLBP-233ENST00000470710 KRTAP19-2Q3LHN2 52 aa4.37□□□□□ -1.71
HDLBP-233ENST00000470710 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
HDLBP-233ENST00000470710 H1FX-AS1Q4G0G2 97 aa4.36□□□□□ -1.71
HDLBP-233ENST00000470710 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
HDLBP-233ENST00000470710 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
HDLBP-233ENST00000470710 COA5Q86WW8 74 aa4.32□□□□□ -1.72
HDLBP-233ENST00000470710 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
HDLBP-233ENST00000470710 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
HDLBP-233ENST00000470710 H3BS24 57 aa4.29□□□□□ -1.72
HDLBP-233ENST00000470710 S4R3F8 94 aa4.29□□□□□ -1.72
HDLBP-233ENST00000470710 CHKB-CPT1BH3BT56 60 aa4.28□□□□□ -1.72
HDLBP-233ENST00000470710 RPS28P62857 69 aaKnown RBP4.28□□□□□ -1.72
HDLBP-233ENST00000470710 LCA10Q71F78 164 aa4.27□□□□□ -1.73
HDLBP-233ENST00000470710 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
HDLBP-233ENST00000470710 SPTSSBQ8NFR3 76 aa4.25□□□□□ -1.73
HDLBP-233ENST00000470710 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
HDLBP-233ENST00000470710 MT1HP80294 61 aa4.22□□□□□ -1.73
HDLBP-233ENST00000470710 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
HDLBP-233ENST00000470710 CSAG1Q6PB30 78 aa4.22□□□□□ -1.73
HDLBP-233ENST00000470710 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
HDLBP-233ENST00000470710 SMIM26A0A096LP01 95 aa4.17□□□□□ -1.74
HDLBP-233ENST00000470710 M0R2T5 61 aa4.15□□□□□ -1.75
HDLBP-233ENST00000470710 H0YAA0 97 aa4.13□□□□□ -1.75
HDLBP-233ENST00000470710 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
HDLBP-233ENST00000470710 V9GYY9 64 aa4.13□□□□□ -1.75
HDLBP-233ENST00000470710 Q1T7F1 81 aa4.12□□□□□ -1.75
HDLBP-233ENST00000470710 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
HDLBP-233ENST00000470710 SEC61GP60059 68 aa4.09□□□□□ -1.75
HDLBP-233ENST00000470710 KRTAP9-3Q9BYQ3 159 aa4.09□□□□□ -1.75
HDLBP-233ENST00000470710 A0A1B0GU69 56 aa4.08□□□□□ -1.76
HDLBP-233ENST00000470710 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
HDLBP-233ENST00000470710 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
HDLBP-233ENST00000470710 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
HDLBP-233ENST00000470710 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
HDLBP-233ENST00000470710 P0C880 135 aa4.04□□□□□ -1.76
HDLBP-233ENST00000470710 MT2AP02795 61 aa4.03□□□□□ -1.76
HDLBP-233ENST00000470710 PSPHP1O15172 72 aa4.02□□□□□ -1.77
HDLBP-233ENST00000470710 Q5VV11 94 aa4.01□□□□□ -1.77
HDLBP-233ENST00000470710 MT1FP04733 61 aa4□□□□□ -1.77
HDLBP-233ENST00000470710 CRIPTQ9P021 101 aa4□□□□□ -1.77
HDLBP-233ENST00000470710 A0A1B0GU33 70 aa3.99□□□□□ -1.77
HDLBP-233ENST00000470710 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
HDLBP-233ENST00000470710 M0QZ58 72 aa3.97□□□□□ -1.77
HDLBP-233ENST00000470710 UQCR11O14957 56 aa3.95□□□□□ -1.78
HDLBP-233ENST00000470710 R4GN34 69 aa3.94□□□□□ -1.78
HDLBP-233ENST00000470710 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
HDLBP-233ENST00000470710 BRK1Q8WUW1 75 aa3.93□□□□□ -1.78
HDLBP-233ENST00000470710 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
HDLBP-233ENST00000470710 A6NED7 52 aa3.91□□□□□ -1.78
HDLBP-233ENST00000470710 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
HDLBP-233ENST00000470710 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
HDLBP-233ENST00000470710 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
HDLBP-233ENST00000470710 A6NN06 94 aa3.84□□□□□ -1.79
HDLBP-233ENST00000470710 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
HDLBP-233ENST00000470710 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
HDLBP-233ENST00000470710 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
HDLBP-233ENST00000470710 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
HDLBP-233ENST00000470710 A0A0D9SG42 100 aa3.83□□□□□ -1.8
HDLBP-233ENST00000470710 A8MU10 97 aa3.83□□□□□ -1.8
HDLBP-233ENST00000470710 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
HDLBP-233ENST00000470710 MT1BP07438 61 aa3.77□□□□□ -1.81
HDLBP-233ENST00000470710 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
HDLBP-233ENST00000470710 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
HDLBP-233ENST00000470710 SPINT4Q6UDR6 99 aa3.75□□□□□ -1.81
HDLBP-233ENST00000470710 PLAC4Q8WY50 150 aa3.75□□□□□ -1.81
HDLBP-233ENST00000470710 K7ERS5 55 aa3.74□□□□□ -1.81
HDLBP-233ENST00000470710 USH2AO75445 5202 aa3.74□□□□□ -1.81
HDLBP-233ENST00000470710 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
HDLBP-233ENST00000470710 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
HDLBP-233ENST00000470710 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
HDLBP-233ENST00000470710 MT1XP80297 61 aa3.63□□□□□ -1.83
HDLBP-233ENST00000470710 KRTAP19-6Q3LI70 58 aa3.62□□□□□ -1.83
HDLBP-233ENST00000470710 KTN1-AS1Q86SY8 53 aa3.62□□□□□ -1.83
HDLBP-233ENST00000470710 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
HDLBP-233ENST00000470710 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
HDLBP-233ENST00000470710 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
HDLBP-233ENST00000470710 ROMO1P60602 79 aa3.57□□□□□ -1.84
HDLBP-233ENST00000470710 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
HDLBP-233ENST00000470710 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
HDLBP-233ENST00000470710 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
HDLBP-233ENST00000470710 TNP1P09430 55 aa3.5□□□□□ -1.85
HDLBP-233ENST00000470710 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
HDLBP-233ENST00000470710 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
HDLBP-233ENST00000470710 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
HDLBP-233ENST00000470710 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms