RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
SYNGAP1-205ENST00000470232 COX6B2Q6YFQ2 88 aa4.87□□□□□ -1.63
SYNGAP1-205ENST00000470232 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
SYNGAP1-205ENST00000470232 Q96NJ1 140 aa4.87□□□□□ -1.63
SYNGAP1-205ENST00000470232 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
SYNGAP1-205ENST00000470232 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
SYNGAP1-205ENST00000470232 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
SYNGAP1-205ENST00000470232 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
SYNGAP1-205ENST00000470232 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
SYNGAP1-205ENST00000470232 USH2AO75445 5202 aa4.85□□□□□ -1.63
SYNGAP1-205ENST00000470232 IGHV6-1A0A0B4J1U7 121 aa4.84□□□□□ -1.63
SYNGAP1-205ENST00000470232 Q1T7F1 81 aa4.84□□□□□ -1.63
SYNGAP1-205ENST00000470232 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
SYNGAP1-205ENST00000470232 NDUFS5O43920 106 aa4.83□□□□□ -1.64
SYNGAP1-205ENST00000470232 V9GYY9 64 aa4.83□□□□□ -1.64
SYNGAP1-205ENST00000470232 MRPL34Q9BQ48 92 aaKnown RBP4.81□□□□□ -1.64
SYNGAP1-205ENST00000470232 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
SYNGAP1-205ENST00000470232 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
SYNGAP1-205ENST00000470232 PSPHP1O15172 72 aa4.78□□□□□ -1.64
SYNGAP1-205ENST00000470232 COA5Q86WW8 74 aa4.78□□□□□ -1.64
SYNGAP1-205ENST00000470232 CD164Q04900 197 aa4.77□□□□□ -1.65
SYNGAP1-205ENST00000470232 A8MUN3 132 aa4.76□□□□□ -1.65
SYNGAP1-205ENST00000470232 C8orf87E5RJ46 101 aa4.76□□□□□ -1.65
SYNGAP1-205ENST00000470232 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
SYNGAP1-205ENST00000470232 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
SYNGAP1-205ENST00000470232 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
SYNGAP1-205ENST00000470232 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
SYNGAP1-205ENST00000470232 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
SYNGAP1-205ENST00000470232 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
SYNGAP1-205ENST00000470232 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
SYNGAP1-205ENST00000470232 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
SYNGAP1-205ENST00000470232 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
SYNGAP1-205ENST00000470232 Q5VV11 94 aa4.72□□□□□ -1.65
SYNGAP1-205ENST00000470232 CHKB-CPT1BH3BT56 60 aa4.7□□□□□ -1.66
SYNGAP1-205ENST00000470232 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
SYNGAP1-205ENST00000470232 HRES1P13985 223 aa4.68□□□□□ -1.66
SYNGAP1-205ENST00000470232 LINC00313P59037 77 aa4.68□□□□□ -1.66
SYNGAP1-205ENST00000470232 Q5W150 140 aa4.68□□□□□ -1.66
SYNGAP1-205ENST00000470232 Q75L30 129 aa4.68□□□□□ -1.66
SYNGAP1-205ENST00000470232 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
SYNGAP1-205ENST00000470232 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
SYNGAP1-205ENST00000470232 A6NED7 52 aa4.64□□□□□ -1.67
SYNGAP1-205ENST00000470232 ACYP2P14621 99 aa4.63□□□□□ -1.67
SYNGAP1-205ENST00000470232 IGKV2-30P06310 120 aa4.62□□□□□ -1.67
SYNGAP1-205ENST00000470232 ATP11AUNQ6ZP68 121 aa4.61□□□□□ -1.67
SYNGAP1-205ENST00000470232 DMAC1Q96GE9 116 aa4.6□□□□□ -1.67
SYNGAP1-205ENST00000470232 A8MU10 97 aa4.59□□□□□ -1.67
SYNGAP1-205ENST00000470232 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.67
SYNGAP1-205ENST00000470232 SPTSSBQ8NFR3 76 aa4.58□□□□□ -1.68
SYNGAP1-205ENST00000470232 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
SYNGAP1-205ENST00000470232 PMAIP1Q13794 54 aa4.57□□□□□ -1.68
SYNGAP1-205ENST00000470232 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
SYNGAP1-205ENST00000470232 LCA10Q71F78 164 aa4.57□□□□□ -1.68
SYNGAP1-205ENST00000470232 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
SYNGAP1-205ENST00000470232 MT2AP02795 61 aa4.55□□□□□ -1.68
SYNGAP1-205ENST00000470232 SPINK7P58062 85 aa4.55□□□□□ -1.68
SYNGAP1-205ENST00000470232 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
SYNGAP1-205ENST00000470232 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
SYNGAP1-205ENST00000470232 C7orf65Q6ZTY9 151 aa4.52□□□□□ -1.69
SYNGAP1-205ENST00000470232 A0A1B0GU69 56 aa4.5□□□□□ -1.69
SYNGAP1-205ENST00000470232 MT1FP04733 61 aa4.5□□□□□ -1.69
SYNGAP1-205ENST00000470232 A6NN06 94 aa4.49□□□□□ -1.69
SYNGAP1-205ENST00000470232 NEBP20929 6669 aa4.48□□□□□ -1.69
SYNGAP1-205ENST00000470232 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
SYNGAP1-205ENST00000470232 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
SYNGAP1-205ENST00000470232 C20orf166-AS1Q96NR2 134 aa4.46□□□□□ -1.7
SYNGAP1-205ENST00000470232 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
SYNGAP1-205ENST00000470232 SEC61GP60059 68 aa4.44□□□□□ -1.7
SYNGAP1-205ENST00000470232 RBM12B-AS1Q9P1G2 102 aa4.44□□□□□ -1.7
SYNGAP1-205ENST00000470232 A8MUU9 505 aa4.42□□□□□ -1.7
SYNGAP1-205ENST00000470232 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
SYNGAP1-205ENST00000470232 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
SYNGAP1-205ENST00000470232 UQCR11O14957 56 aa4.41□□□□□ -1.7
SYNGAP1-205ENST00000470232 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
SYNGAP1-205ENST00000470232 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
SYNGAP1-205ENST00000470232 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SYNGAP1-205ENST00000470232 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
SYNGAP1-205ENST00000470232 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
SYNGAP1-205ENST00000470232 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
SYNGAP1-205ENST00000470232 A0A1B0GU33 70 aa4.25□□□□□ -1.73
SYNGAP1-205ENST00000470232 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
SYNGAP1-205ENST00000470232 H0YAA0 97 aa4.23□□□□□ -1.73
SYNGAP1-205ENST00000470232 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
SYNGAP1-205ENST00000470232 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
SYNGAP1-205ENST00000470232 KMT2DO14686 5537 aa4.19□□□□□ -1.74
SYNGAP1-205ENST00000470232 K7ERS5 55 aa4.17□□□□□ -1.74
SYNGAP1-205ENST00000470232 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
SYNGAP1-205ENST00000470232 CSAG1Q6PB30 78 aa4.16□□□□□ -1.74
SYNGAP1-205ENST00000470232 S4R3F8 94 aa4.16□□□□□ -1.74
SYNGAP1-205ENST00000470232 LINC01554Q52M75 96 aa4.14□□□□□ -1.75
SYNGAP1-205ENST00000470232 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
SYNGAP1-205ENST00000470232 KRTAP2-2Q9BYT5 123 aa4.07□□□□□ -1.76
SYNGAP1-205ENST00000470232 KRTAP2-1Q9BYU5 128 aa4.07□□□□□ -1.76
SYNGAP1-205ENST00000470232 A0A0D9SG42 100 aa4.06□□□□□ -1.76
SYNGAP1-205ENST00000470232 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
SYNGAP1-205ENST00000470232 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
SYNGAP1-205ENST00000470232 ROMO1P60602 79 aa4.04□□□□□ -1.76
SYNGAP1-205ENST00000470232 MT1BP07438 61 aa4.02□□□□□ -1.77
SYNGAP1-205ENST00000470232 P0C880 135 aa4.02□□□□□ -1.77
SYNGAP1-205ENST00000470232 SPRR2EP22531 72 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms