RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RBM12B-AS1Q9P1G2 102 aa5.26□□□□□ -1.57
MSH5-213ENST00000468136 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
MSH5-213ENST00000468136 PSPHP1O15172 72 aa5.23□□□□□ -1.57
MSH5-213ENST00000468136 SEC61GP60059 68 aa5.23□□□□□ -1.57
MSH5-213ENST00000468136 Q5VV11 94 aa5.23□□□□□ -1.57
MSH5-213ENST00000468136 A0A1B0GU69 56 aa5.22□□□□□ -1.57
MSH5-213ENST00000468136 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
MSH5-213ENST00000468136 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
MSH5-213ENST00000468136 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
MSH5-213ENST00000468136 S4R3F8 94 aa5.17□□□□□ -1.58
MSH5-213ENST00000468136 A6NED7 52 aa5.15□□□□□ -1.59
MSH5-213ENST00000468136 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
MSH5-213ENST00000468136 BRK1Q8WUW1 75 aa5.14□□□□□ -1.59
MSH5-213ENST00000468136 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
MSH5-213ENST00000468136 UQCR11O14957 56 aa5.12□□□□□ -1.59
MSH5-213ENST00000468136 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
MSH5-213ENST00000468136 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
MSH5-213ENST00000468136 LRP2P98164 4655 aa5.1□□□□□ -1.59
MSH5-213ENST00000468136 LCA10Q71F78 164 aa5.1□□□□□ -1.59
MSH5-213ENST00000468136 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
MSH5-213ENST00000468136 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.59
MSH5-213ENST00000468136 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
MSH5-213ENST00000468136 SPATA8Q6RVD6 105 aa5.05□□□□□ -1.6
MSH5-213ENST00000468136 LPAP08519 4548 aa5.05□□□□□ -1.6
MSH5-213ENST00000468136 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
MSH5-213ENST00000468136 A0A1B0GU33 70 aa5.03□□□□□ -1.6
MSH5-213ENST00000468136 H0YAA0 97 aa5.03□□□□□ -1.6
MSH5-213ENST00000468136 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
MSH5-213ENST00000468136 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
MSH5-213ENST00000468136 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
MSH5-213ENST00000468136 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
MSH5-213ENST00000468136 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
MSH5-213ENST00000468136 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
MSH5-213ENST00000468136 HERC1Q15751 4861 aa4.96□□□□□ -1.62
MSH5-213ENST00000468136 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
MSH5-213ENST00000468136 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
MSH5-213ENST00000468136 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
MSH5-213ENST00000468136 M0QZ58 72 aa4.91□□□□□ -1.62
MSH5-213ENST00000468136 ADM2Q7Z4H4 148 aa4.91□□□□□ -1.62
MSH5-213ENST00000468136 H3BS24 57 aa4.9□□□□□ -1.63
MSH5-213ENST00000468136 K7ERS5 55 aa4.9□□□□□ -1.63
MSH5-213ENST00000468136 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
MSH5-213ENST00000468136 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
MSH5-213ENST00000468136 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
MSH5-213ENST00000468136 A8MU10 97 aa4.86□□□□□ -1.63
MSH5-213ENST00000468136 P0C880 135 aa4.85□□□□□ -1.63
MSH5-213ENST00000468136 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
MSH5-213ENST00000468136 A6NN06 94 aa4.83□□□□□ -1.64
MSH5-213ENST00000468136 CRIPTQ9P021 101 aa4.81□□□□□ -1.64
MSH5-213ENST00000468136 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
MSH5-213ENST00000468136 R4GN34 69 aa4.78□□□□□ -1.64
MSH5-213ENST00000468136 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
MSH5-213ENST00000468136 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
MSH5-213ENST00000468136 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
MSH5-213ENST00000468136 A0A0D9SG42 100 aa4.71□□□□□ -1.66
MSH5-213ENST00000468136 M0R2T5 61 aa4.7□□□□□ -1.66
MSH5-213ENST00000468136 MT1HP80294 61 aa4.69□□□□□ -1.66
MSH5-213ENST00000468136 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
MSH5-213ENST00000468136 MUC2Q02817 5179 aa4.65□□□□□ -1.66
MSH5-213ENST00000468136 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
MSH5-213ENST00000468136 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
MSH5-213ENST00000468136 RNF213Q63HN8 5207 aa4.63□□□□□ -1.67
MSH5-213ENST00000468136 ROMO1P60602 79 aa4.62□□□□□ -1.67
MSH5-213ENST00000468136 KRTAP12-2P59991 146 aa4.61□□□□□ -1.67
MSH5-213ENST00000468136 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
MSH5-213ENST00000468136 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
MSH5-213ENST00000468136 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
MSH5-213ENST00000468136 UBR4Q5T4S7 5183 aa4.59□□□□□ -1.67
MSH5-213ENST00000468136 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
MSH5-213ENST00000468136 FAT4Q6V0I7 4981 aa4.55□□□□□ -1.68
MSH5-213ENST00000468136 MT2AP02795 61 aa4.53□□□□□ -1.68
MSH5-213ENST00000468136 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
MSH5-213ENST00000468136 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
MSH5-213ENST00000468136 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
MSH5-213ENST00000468136 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
MSH5-213ENST00000468136 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
MSH5-213ENST00000468136 MT1FP04733 61 aa4.48□□□□□ -1.69
MSH5-213ENST00000468136 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
MSH5-213ENST00000468136 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
MSH5-213ENST00000468136 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
MSH5-213ENST00000468136 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
MSH5-213ENST00000468136 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
MSH5-213ENST00000468136 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
MSH5-213ENST00000468136 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
MSH5-213ENST00000468136 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
MSH5-213ENST00000468136 C10orf95Q9H7T3 257 aa4.37□□□□□ -1.71
MSH5-213ENST00000468136 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
MSH5-213ENST00000468136 KRTAP23-1A1A580 65 aa4.33□□□□□ -1.72
MSH5-213ENST00000468136 TNP1P09430 55 aa4.33□□□□□ -1.72
MSH5-213ENST00000468136 MT1BP07438 61 aa4.28□□□□□ -1.72
MSH5-213ENST00000468136 PRO2289Q9P1D8 64 aa4.27□□□□□ -1.73
MSH5-213ENST00000468136 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
MSH5-213ENST00000468136 MT1XP80297 61 aa4.17□□□□□ -1.74
MSH5-213ENST00000468136 KRTAP10-12P60413 245 aa4.05□□□□□ -1.76
MSH5-213ENST00000468136 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
MSH5-213ENST00000468136 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
MSH5-213ENST00000468136 LCE3AQ5TA76 89 aa4□□□□□ -1.77
MSH5-213ENST00000468136 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
MSH5-213ENST00000468136 USH2AO75445 5202 aa3.94□□□□□ -1.78
MSH5-213ENST00000468136 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms