RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
VARS2-204ENST00000467717 S4R3F8 94 aa8.27□□□□□ -1.09
VARS2-204ENST00000467717 DMAC1Q96GE9 116 aa8.22□□□□□ -1.09
VARS2-204ENST00000467717 LCA10Q71F78 164 aa8.21□□□□□ -1.1
VARS2-204ENST00000467717 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
VARS2-204ENST00000467717 SPANXA2-OT1Q8N9U9 137 aa8.17□□□□□ -1.1
VARS2-204ENST00000467717 KRTAP9-8Q9BYQ0 159 aa8.16□□□□□ -1.1
VARS2-204ENST00000467717 NDUFC1O43677 76 aa8.15□□□□□ -1.1
VARS2-204ENST00000467717 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
VARS2-204ENST00000467717 ACYP2P14621 99 aa8.11□□□□□ -1.11
VARS2-204ENST00000467717 CCDC179H3BU77 68 aa8.09□□□□□ -1.11
VARS2-204ENST00000467717 MT2AP02795 61 aa8.09□□□□□ -1.11
VARS2-204ENST00000467717 CYSTM1Q9H1C7 97 aa8.09□□□□□ -1.11
VARS2-204ENST00000467717 H7BZZ5 65 aa8.08□□□□□ -1.12
VARS2-204ENST00000467717 MT1FP04733 61 aa8.03□□□□□ -1.12
VARS2-204ENST00000467717 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
VARS2-204ENST00000467717 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
VARS2-204ENST00000467717 SSPOA2VEC9 5147 aa7.94□□□□□ -1.14
VARS2-204ENST00000467717 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
VARS2-204ENST00000467717 H0YAA0 97 aa7.92□□□□□ -1.14
VARS2-204ENST00000467717 COA5Q86WW8 74 aa7.9□□□□□ -1.14
VARS2-204ENST00000467717 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
VARS2-204ENST00000467717 USH2AO75445 5202 aa7.86□□□□□ -1.15
VARS2-204ENST00000467717 ATP5EP56381 51 aaPredicted RBP7.86□□□□□ -1.15
VARS2-204ENST00000467717 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
VARS2-204ENST00000467717 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.15
VARS2-204ENST00000467717 TMEM258P61165 79 aa7.83□□□□□ -1.16
VARS2-204ENST00000467717 SYNE2Q8WXH0 6885 aaKnown RBP7.82□□□□□ -1.16
VARS2-204ENST00000467717 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
VARS2-204ENST00000467717 MACF1Q9UPN3 7388 aaKnown RBP7.76□□□□□ -1.17
VARS2-204ENST00000467717 LCE2BO14633 110 aa7.74□□□□□ -1.17
VARS2-204ENST00000467717 PCP4P48539 62 aa7.74□□□□□ -1.17
VARS2-204ENST00000467717 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
VARS2-204ENST00000467717 P0C880 135 aa7.71□□□□□ -1.18
VARS2-204ENST00000467717 KRTAP19-1Q8IUB9 90 aa7.71□□□□□ -1.18
VARS2-204ENST00000467717 SPRR2GQ9BYE4 73 aa7.7□□□□□ -1.18
VARS2-204ENST00000467717 SEC61GP60059 68 aa7.61□□□□□ -1.19
VARS2-204ENST00000467717 R4GN34 69 aa7.61□□□□□ -1.19
VARS2-204ENST00000467717 SERP1Q9Y6X1 66 aa7.58□□□□□ -1.2
VARS2-204ENST00000467717 M0QZ58 72 aa7.57□□□□□ -1.2
VARS2-204ENST00000467717 KRTAP19-8Q3LI54 63 aa7.56□□□□□ -1.2
VARS2-204ENST00000467717 Q5VV11 94 aa7.53□□□□□ -1.2
VARS2-204ENST00000467717 A0A1B0GU69 56 aa7.49□□□□□ -1.21
VARS2-204ENST00000467717 MT1BP07438 61 aa7.49□□□□□ -1.21
VARS2-204ENST00000467717 KRTAP6-3Q3LI67 103 aa7.49□□□□□ -1.21
VARS2-204ENST00000467717 LINC01558Q9Y6Z2 57 aa7.44□□□□□ -1.22
VARS2-204ENST00000467717 LINC01554Q52M75 96 aa7.43□□□□□ -1.22
VARS2-204ENST00000467717 NEBP20929 6669 aa7.43□□□□□ -1.22
VARS2-204ENST00000467717 A0A1B0GU33 70 aa7.42□□□□□ -1.22
VARS2-204ENST00000467717 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
VARS2-204ENST00000467717 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
VARS2-204ENST00000467717 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
VARS2-204ENST00000467717 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
VARS2-204ENST00000467717 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
VARS2-204ENST00000467717 V9GYY9 64 aa7.32□□□□□ -1.24
VARS2-204ENST00000467717 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
VARS2-204ENST00000467717 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
VARS2-204ENST00000467717 A6NN06 94 aa7.3□□□□□ -1.24
VARS2-204ENST00000467717 KRTAP20-1Q3LI63 56 aa7.3□□□□□ -1.24
VARS2-204ENST00000467717 Q1T7F1 81 aa7.28□□□□□ -1.24
VARS2-204ENST00000467717 A0A0D9SG42 100 aa7.24□□□□□ -1.25
VARS2-204ENST00000467717 KRTAP10-5P60370 271 aa7.23□□□□□ -1.25
VARS2-204ENST00000467717 PSPHP1O15172 72 aa7.19□□□□□ -1.26
VARS2-204ENST00000467717 UQCR11O14957 56 aa7.18□□□□□ -1.26
VARS2-204ENST00000467717 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
VARS2-204ENST00000467717 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
VARS2-204ENST00000467717 MT1XP80297 61 aa7.14□□□□□ -1.27
VARS2-204ENST00000467717 A8MU10 97 aa7.13□□□□□ -1.27
VARS2-204ENST00000467717 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
VARS2-204ENST00000467717 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
VARS2-204ENST00000467717 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
VARS2-204ENST00000467717 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
VARS2-204ENST00000467717 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
VARS2-204ENST00000467717 A6NED7 52 aa6.98□□□□□ -1.29
VARS2-204ENST00000467717 KRTAP2-3P0C7H8 128 aa6.89□□□□□ -1.31
VARS2-204ENST00000467717 KRTAP2-4Q9BYR9 128 aa6.89□□□□□ -1.31
VARS2-204ENST00000467717 KMT2DO14686 5537 aa6.88□□□□□ -1.31
VARS2-204ENST00000467717 K7ERS5 55 aa6.85□□□□□ -1.31
VARS2-204ENST00000467717 KRTAP5-9P26371 169 aa6.85□□□□□ -1.31
VARS2-204ENST00000467717 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
VARS2-204ENST00000467717 MDN1Q9NU22 5596 aa6.83□□□□□ -1.32
VARS2-204ENST00000467717 KRTAP10-12P60413 245 aa6.79□□□□□ -1.32
VARS2-204ENST00000467717 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
VARS2-204ENST00000467717 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
VARS2-204ENST00000467717 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
VARS2-204ENST00000467717 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
VARS2-204ENST00000467717 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
VARS2-204ENST00000467717 TNP1P09430 55 aa6.65□□□□□ -1.34
VARS2-204ENST00000467717 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
VARS2-204ENST00000467717 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
VARS2-204ENST00000467717 SPRR2EP22531 72 aa6.58□□□□□ -1.36
VARS2-204ENST00000467717 SPRR2BP35325 72 aa6.58□□□□□ -1.36
VARS2-204ENST00000467717 SPRR2AP35326 72 aa6.58□□□□□ -1.36
VARS2-204ENST00000467717 GPR98Q8WXG9 6306 aa6.55□□□□□ -1.36
VARS2-204ENST00000467717 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
VARS2-204ENST00000467717 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
VARS2-204ENST00000467717 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
VARS2-204ENST00000467717 ROMO1P60602 79 aa6.47□□□□□ -1.37
VARS2-204ENST00000467717 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
VARS2-204ENST00000467717 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms