RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 SPANXA2-OT1Q8N9U9 137 aa7.86□□□□□ -1.15
HLA-C-205ENST00000466892 NDUFC1O43677 76 aa7.85□□□□□ -1.15
HLA-C-205ENST00000466892 LCA10Q71F78 164 aa7.85□□□□□ -1.15
HLA-C-205ENST00000466892 CSAG1Q6PB30 78 aa7.83□□□□□ -1.16
HLA-C-205ENST00000466892 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
HLA-C-205ENST00000466892 ACYP2P14621 99 aa7.79□□□□□ -1.16
HLA-C-205ENST00000466892 H7BZZ5 65 aa7.73□□□□□ -1.17
HLA-C-205ENST00000466892 MT2AP02795 61 aa7.73□□□□□ -1.17
HLA-C-205ENST00000466892 CCDC179H3BU77 68 aa7.68□□□□□ -1.18
HLA-C-205ENST00000466892 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
HLA-C-205ENST00000466892 H0YAA0 97 aa7.66□□□□□ -1.18
HLA-C-205ENST00000466892 MT1FP04733 61 aa7.66□□□□□ -1.18
HLA-C-205ENST00000466892 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
HLA-C-205ENST00000466892 SPTSSBQ8NFR3 76 aa7.66□□□□□ -1.18
HLA-C-205ENST00000466892 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
HLA-C-205ENST00000466892 ATP5EP56381 51 aaPredicted RBP7.59□□□□□ -1.19
HLA-C-205ENST00000466892 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
HLA-C-205ENST00000466892 COA5Q86WW8 74 aa7.55□□□□□ -1.2
HLA-C-205ENST00000466892 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
HLA-C-205ENST00000466892 TMEM258P61165 79 aa7.52□□□□□ -1.21
HLA-C-205ENST00000466892 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
HLA-C-205ENST00000466892 ADM2Q7Z4H4 148 aa7.48□□□□□ -1.21
HLA-C-205ENST00000466892 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
HLA-C-205ENST00000466892 PCP4P48539 62 aa7.37□□□□□ -1.23
HLA-C-205ENST00000466892 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
HLA-C-205ENST00000466892 P0C880 135 aa7.34□□□□□ -1.23
HLA-C-205ENST00000466892 SEC61GP60059 68 aa7.31□□□□□ -1.24
HLA-C-205ENST00000466892 R4GN34 69 aa7.3□□□□□ -1.24
HLA-C-205ENST00000466892 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
HLA-C-205ENST00000466892 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
HLA-C-205ENST00000466892 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
HLA-C-205ENST00000466892 SERP1Q9Y6X1 66 aa7.27□□□□□ -1.25
HLA-C-205ENST00000466892 CRCT1Q9UGL9 99 aa7.25□□□□□ -1.25
HLA-C-205ENST00000466892 M0QZ58 72 aa7.23□□□□□ -1.25
HLA-C-205ENST00000466892 Q5VV11 94 aa7.23□□□□□ -1.25
HLA-C-205ENST00000466892 USH2AO75445 5202 aa7.22□□□□□ -1.25
HLA-C-205ENST00000466892 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
HLA-C-205ENST00000466892 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
HLA-C-205ENST00000466892 A0A1B0GU69 56 aa7.18□□□□□ -1.26
HLA-C-205ENST00000466892 MT1BP07438 61 aa7.16□□□□□ -1.26
HLA-C-205ENST00000466892 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
HLA-C-205ENST00000466892 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
HLA-C-205ENST00000466892 KRTAP19-6Q3LI70 58 aa7.12□□□□□ -1.27
HLA-C-205ENST00000466892 A0A1B0GU33 70 aa7.1□□□□□ -1.27
HLA-C-205ENST00000466892 RPS28P62857 69 aaKnown RBP7.07□□□□□ -1.28
HLA-C-205ENST00000466892 SSPOA2VEC9 5147 aa7.07□□□□□ -1.28
HLA-C-205ENST00000466892 A6NN06 94 aa7.06□□□□□ -1.28
HLA-C-205ENST00000466892 V9GYY9 64 aa7.06□□□□□ -1.28
HLA-C-205ENST00000466892 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
HLA-C-205ENST00000466892 PLAC4Q8WY50 150 aa7.05□□□□□ -1.28
HLA-C-205ENST00000466892 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
HLA-C-205ENST00000466892 SMIM26A0A096LP01 95 aa7.01□□□□□ -1.29
HLA-C-205ENST00000466892 Q1T7F1 81 aa7□□□□□ -1.29
HLA-C-205ENST00000466892 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
HLA-C-205ENST00000466892 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
HLA-C-205ENST00000466892 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
HLA-C-205ENST00000466892 UQCR11O14957 56 aa6.9□□□□□ -1.3
HLA-C-205ENST00000466892 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
HLA-C-205ENST00000466892 A0A0D9SG42 100 aa6.86□□□□□ -1.31
HLA-C-205ENST00000466892 MT1XP80297 61 aa6.83□□□□□ -1.32
HLA-C-205ENST00000466892 PSPHP1O15172 72 aa6.82□□□□□ -1.32
HLA-C-205ENST00000466892 KRTAP12-1P59990 96 aa6.78□□□□□ -1.32
HLA-C-205ENST00000466892 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
HLA-C-205ENST00000466892 A8MU10 97 aa6.76□□□□□ -1.33
HLA-C-205ENST00000466892 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
HLA-C-205ENST00000466892 MIR22HGQ0VDD5 57 aa6.75□□□□□ -1.33
HLA-C-205ENST00000466892 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
HLA-C-205ENST00000466892 KRTAP12-2P59991 146 aa6.71□□□□□ -1.34
HLA-C-205ENST00000466892 A6NED7 52 aa6.66□□□□□ -1.34
HLA-C-205ENST00000466892 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
HLA-C-205ENST00000466892 K7ERS5 55 aa6.6□□□□□ -1.35
HLA-C-205ENST00000466892 MACF1Q9UPN3 7388 aaKnown RBP6.59□□□□□ -1.35
HLA-C-205ENST00000466892 KRTAP10-12P60413 245 aa6.53□□□□□ -1.36
HLA-C-205ENST00000466892 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
HLA-C-205ENST00000466892 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
HLA-C-205ENST00000466892 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
HLA-C-205ENST00000466892 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
HLA-C-205ENST00000466892 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
HLA-C-205ENST00000466892 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
HLA-C-205ENST00000466892 TNP1P09430 55 aa6.38□□□□□ -1.39
HLA-C-205ENST00000466892 KRTAP5-9P26371 169 aa6.38□□□□□ -1.39
HLA-C-205ENST00000466892 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
HLA-C-205ENST00000466892 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
HLA-C-205ENST00000466892 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
HLA-C-205ENST00000466892 LCE3BQ5TA77 95 aa6.28□□□□□ -1.4
HLA-C-205ENST00000466892 KRTAP4-12Q9BQ66 201 aa6.26□□□□□ -1.41
HLA-C-205ENST00000466892 KMT2DO14686 5537 aa6.26□□□□□ -1.41
HLA-C-205ENST00000466892 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
HLA-C-205ENST00000466892 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
HLA-C-205ENST00000466892 ROMO1P60602 79 aa6.19□□□□□ -1.42
HLA-C-205ENST00000466892 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
HLA-C-205ENST00000466892 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
HLA-C-205ENST00000466892 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
HLA-C-205ENST00000466892 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
HLA-C-205ENST00000466892 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
HLA-C-205ENST00000466892 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
HLA-C-205ENST00000466892 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
HLA-C-205ENST00000466892 MT1EP04732 61 aa6.03□□□□□ -1.44
HLA-C-205ENST00000466892 SPRR2EP22531 72 aa6.03□□□□□ -1.44
HLA-C-205ENST00000466892 SPRR2BP35325 72 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms