RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 LCA10Q71F78 164 aa5.64□□□□□ -1.51
CPNE1-221ENST00000462352 A8MUN3 132 aa5.63□□□□□ -1.51
CPNE1-221ENST00000462352 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
CPNE1-221ENST00000462352 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
CPNE1-221ENST00000462352 COX7CP15954 63 aa5.62□□□□□ -1.51
CPNE1-221ENST00000462352 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
CPNE1-221ENST00000462352 MT1FP04733 61 aa5.59□□□□□ -1.51
CPNE1-221ENST00000462352 PCP4P48539 62 aa5.59□□□□□ -1.51
CPNE1-221ENST00000462352 CSAG1Q6PB30 78 aa5.58□□□□□ -1.52
CPNE1-221ENST00000462352 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
CPNE1-221ENST00000462352 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
CPNE1-221ENST00000462352 NDUFC1O43677 76 aa5.52□□□□□ -1.53
CPNE1-221ENST00000462352 CCDC179H3BU77 68 aa5.51□□□□□ -1.53
CPNE1-221ENST00000462352 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
CPNE1-221ENST00000462352 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
CPNE1-221ENST00000462352 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
CPNE1-221ENST00000462352 ACYP2P14621 99 aa5.48□□□□□ -1.53
CPNE1-221ENST00000462352 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
CPNE1-221ENST00000462352 CYSTM1Q9H1C7 97 aa5.48□□□□□ -1.53
CPNE1-221ENST00000462352 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
CPNE1-221ENST00000462352 H7BZZ5 65 aa5.45□□□□□ -1.54
CPNE1-221ENST00000462352 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
CPNE1-221ENST00000462352 USH2AO75445 5202 aa5.44□□□□□ -1.54
CPNE1-221ENST00000462352 H0YAA0 97 aa5.41□□□□□ -1.54
CPNE1-221ENST00000462352 CHKB-CPT1BH3BT56 60 aa5.38□□□□□ -1.55
CPNE1-221ENST00000462352 TMEM258P61165 79 aa5.38□□□□□ -1.55
CPNE1-221ENST00000462352 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
CPNE1-221ENST00000462352 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
CPNE1-221ENST00000462352 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
CPNE1-221ENST00000462352 CRCT1Q9UGL9 99 aa5.35□□□□□ -1.55
CPNE1-221ENST00000462352 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
CPNE1-221ENST00000462352 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
CPNE1-221ENST00000462352 COA5Q86WW8 74 aa5.32□□□□□ -1.56
CPNE1-221ENST00000462352 CRIPTQ9P021 101 aa5.32□□□□□ -1.56
CPNE1-221ENST00000462352 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
CPNE1-221ENST00000462352 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
CPNE1-221ENST00000462352 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.28□□□□□ -1.56
CPNE1-221ENST00000462352 P0C880 135 aa5.28□□□□□ -1.56
CPNE1-221ENST00000462352 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
CPNE1-221ENST00000462352 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
CPNE1-221ENST00000462352 Q5VV11 94 aa5.21□□□□□ -1.58
CPNE1-221ENST00000462352 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
CPNE1-221ENST00000462352 R4GN34 69 aa5.21□□□□□ -1.58
CPNE1-221ENST00000462352 MT1BP07438 61 aa5.2□□□□□ -1.58
CPNE1-221ENST00000462352 M0QZ58 72 aa5.18□□□□□ -1.58
CPNE1-221ENST00000462352 KRTAP19-6Q3LI70 58 aa5.17□□□□□ -1.58
CPNE1-221ENST00000462352 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
CPNE1-221ENST00000462352 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
CPNE1-221ENST00000462352 SEC61GP60059 68 aa5.12□□□□□ -1.59
CPNE1-221ENST00000462352 LINC01554Q52M75 96 aa5.09□□□□□ -1.59
CPNE1-221ENST00000462352 SMIM26A0A096LP01 95 aa5.06□□□□□ -1.6
CPNE1-221ENST00000462352 A0A1B0GU69 56 aa5.05□□□□□ -1.6
CPNE1-221ENST00000462352 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
CPNE1-221ENST00000462352 A6NN06 94 aa5.04□□□□□ -1.6
CPNE1-221ENST00000462352 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
CPNE1-221ENST00000462352 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
CPNE1-221ENST00000462352 KRTAP9-4Q9BYQ2 154 aa5.04□□□□□ -1.6
CPNE1-221ENST00000462352 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
CPNE1-221ENST00000462352 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
CPNE1-221ENST00000462352 V9GYY9 64 aa5.02□□□□□ -1.61
CPNE1-221ENST00000462352 A0A1B0GU33 70 aa5.01□□□□□ -1.61
CPNE1-221ENST00000462352 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
CPNE1-221ENST00000462352 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
CPNE1-221ENST00000462352 Q1T7F1 81 aa4.96□□□□□ -1.62
CPNE1-221ENST00000462352 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
CPNE1-221ENST00000462352 MT1XP80297 61 aa4.94□□□□□ -1.62
CPNE1-221ENST00000462352 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
CPNE1-221ENST00000462352 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
CPNE1-221ENST00000462352 A0A0D9SG42 100 aa4.92□□□□□ -1.62
CPNE1-221ENST00000462352 SYNE2Q8WXH0 6885 aaKnown RBP4.92□□□□□ -1.62
CPNE1-221ENST00000462352 LCE1DQ5T752 114 aa4.9□□□□□ -1.63
CPNE1-221ENST00000462352 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
CPNE1-221ENST00000462352 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
CPNE1-221ENST00000462352 PSPHP1O15172 72 aa4.87□□□□□ -1.63
CPNE1-221ENST00000462352 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
CPNE1-221ENST00000462352 A8MU10 97 aa4.84□□□□□ -1.63
CPNE1-221ENST00000462352 UQCR11O14957 56 aa4.83□□□□□ -1.64
CPNE1-221ENST00000462352 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
CPNE1-221ENST00000462352 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
CPNE1-221ENST00000462352 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
CPNE1-221ENST00000462352 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
CPNE1-221ENST00000462352 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
CPNE1-221ENST00000462352 A6NED7 52 aa4.77□□□□□ -1.65
CPNE1-221ENST00000462352 MIR22HGQ0VDD5 57 aa4.76□□□□□ -1.65
CPNE1-221ENST00000462352 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
CPNE1-221ENST00000462352 KMT2DO14686 5537 aa4.74□□□□□ -1.65
CPNE1-221ENST00000462352 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
CPNE1-221ENST00000462352 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
CPNE1-221ENST00000462352 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
CPNE1-221ENST00000462352 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
CPNE1-221ENST00000462352 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
CPNE1-221ENST00000462352 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
CPNE1-221ENST00000462352 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
CPNE1-221ENST00000462352 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
CPNE1-221ENST00000462352 K7ERS5 55 aa4.6□□□□□ -1.67
CPNE1-221ENST00000462352 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
CPNE1-221ENST00000462352 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
CPNE1-221ENST00000462352 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
CPNE1-221ENST00000462352 NEBP20929 6669 aa4.57□□□□□ -1.68
CPNE1-221ENST00000462352 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms