RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SMIM20Q8N5G0 67 aa6.65□□□□□ -1.34
HDLBP-229ENST00000460826 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
HDLBP-229ENST00000460826 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
HDLBP-229ENST00000460826 H3BS24 57 aa6.59□□□□□ -1.35
HDLBP-229ENST00000460826 FSIP2Q5CZC0 6907 aa6.58□□□□□ -1.36
HDLBP-229ENST00000460826 CSAG1Q6PB30 78 aa6.57□□□□□ -1.36
HDLBP-229ENST00000460826 KRTAP9-3Q9BYQ3 159 aa6.57□□□□□ -1.36
HDLBP-229ENST00000460826 A8MUN3 132 aa6.56□□□□□ -1.36
HDLBP-229ENST00000460826 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
HDLBP-229ENST00000460826 USH2AO75445 5202 aa6.55□□□□□ -1.36
HDLBP-229ENST00000460826 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
HDLBP-229ENST00000460826 SNURFQ9Y675 71 aa6.53□□□□□ -1.36
HDLBP-229ENST00000460826 DMAC1Q96GE9 116 aa6.51□□□□□ -1.37
HDLBP-229ENST00000460826 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
HDLBP-229ENST00000460826 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
HDLBP-229ENST00000460826 NDUFC1O43677 76 aa6.47□□□□□ -1.37
HDLBP-229ENST00000460826 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.46□□□□□ -1.38
HDLBP-229ENST00000460826 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
HDLBP-229ENST00000460826 COX7CP15954 63 aa6.42□□□□□ -1.38
HDLBP-229ENST00000460826 ACYP2P14621 99 aa6.38□□□□□ -1.39
HDLBP-229ENST00000460826 KRTAP19-1Q8IUB9 90 aa6.37□□□□□ -1.39
HDLBP-229ENST00000460826 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
HDLBP-229ENST00000460826 H0YAA0 97 aa6.35□□□□□ -1.39
HDLBP-229ENST00000460826 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
HDLBP-229ENST00000460826 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
HDLBP-229ENST00000460826 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
HDLBP-229ENST00000460826 SPRR2GQ9BYE4 73 aa6.29□□□□□ -1.4
HDLBP-229ENST00000460826 H7BZZ5 65 aa6.28□□□□□ -1.4
HDLBP-229ENST00000460826 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
HDLBP-229ENST00000460826 CCDC179H3BU77 68 aa6.25□□□□□ -1.41
HDLBP-229ENST00000460826 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
HDLBP-229ENST00000460826 P0C880 135 aa6.24□□□□□ -1.41
HDLBP-229ENST00000460826 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
HDLBP-229ENST00000460826 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
HDLBP-229ENST00000460826 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
HDLBP-229ENST00000460826 MT1BP07438 61 aa6.21□□□□□ -1.42
HDLBP-229ENST00000460826 COA5Q86WW8 74 aa6.2□□□□□ -1.42
HDLBP-229ENST00000460826 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
HDLBP-229ENST00000460826 Q5VV11 94 aa6.17□□□□□ -1.42
HDLBP-229ENST00000460826 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
HDLBP-229ENST00000460826 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
HDLBP-229ENST00000460826 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
HDLBP-229ENST00000460826 R4GN34 69 aa6.11□□□□□ -1.43
HDLBP-229ENST00000460826 M0QZ58 72 aa6.1□□□□□ -1.43
HDLBP-229ENST00000460826 KRTAP9-7A8MTY7 169 aa6.08□□□□□ -1.44
HDLBP-229ENST00000460826 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
HDLBP-229ENST00000460826 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
HDLBP-229ENST00000460826 ATP5EP56381 51 aaPredicted RBP6.01□□□□□ -1.45
HDLBP-229ENST00000460826 LINC01554Q52M75 96 aa6□□□□□ -1.45
HDLBP-229ENST00000460826 A6NN06 94 aa5.99□□□□□ -1.45
HDLBP-229ENST00000460826 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
HDLBP-229ENST00000460826 TMEM258P61165 79 aa5.97□□□□□ -1.45
HDLBP-229ENST00000460826 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
HDLBP-229ENST00000460826 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
HDLBP-229ENST00000460826 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
HDLBP-229ENST00000460826 SEC61GP60059 68 aa5.92□□□□□ -1.46
HDLBP-229ENST00000460826 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
HDLBP-229ENST00000460826 MT1XP80297 61 aa5.88□□□□□ -1.47
HDLBP-229ENST00000460826 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
HDLBP-229ENST00000460826 A0A1B0GU33 70 aa5.84□□□□□ -1.47
HDLBP-229ENST00000460826 A0A1B0GU69 56 aa5.84□□□□□ -1.47
HDLBP-229ENST00000460826 SPATA8Q6RVD6 105 aa5.83□□□□□ -1.48
HDLBP-229ENST00000460826 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
HDLBP-229ENST00000460826 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
HDLBP-229ENST00000460826 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
HDLBP-229ENST00000460826 A0A0D9SG42 100 aa5.77□□□□□ -1.49
HDLBP-229ENST00000460826 PCP4P48539 62 aa5.76□□□□□ -1.49
HDLBP-229ENST00000460826 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
HDLBP-229ENST00000460826 PRR15LQ9BU68 103 aa5.73□□□□□ -1.49
HDLBP-229ENST00000460826 KMT2DO14686 5537 aa5.69□□□□□ -1.5
HDLBP-229ENST00000460826 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
HDLBP-229ENST00000460826 A8MU10 97 aa5.68□□□□□ -1.5
HDLBP-229ENST00000460826 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
HDLBP-229ENST00000460826 SPINT4Q6UDR6 99 aa5.66□□□□□ -1.5
HDLBP-229ENST00000460826 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
HDLBP-229ENST00000460826 SMIM26A0A096LP01 95 aa5.65□□□□□ -1.5
HDLBP-229ENST00000460826 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
HDLBP-229ENST00000460826 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
HDLBP-229ENST00000460826 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
HDLBP-229ENST00000460826 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
HDLBP-229ENST00000460826 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
HDLBP-229ENST00000460826 Q1T7F1 81 aa5.58□□□□□ -1.52
HDLBP-229ENST00000460826 UQCR11O14957 56 aa5.56□□□□□ -1.52
HDLBP-229ENST00000460826 V9GYY9 64 aa5.56□□□□□ -1.52
HDLBP-229ENST00000460826 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
HDLBP-229ENST00000460826 PSPHP1O15172 72 aa5.55□□□□□ -1.52
HDLBP-229ENST00000460826 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
HDLBP-229ENST00000460826 KRTAP23-1A1A580 65 aa5.54□□□□□ -1.52
HDLBP-229ENST00000460826 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
HDLBP-229ENST00000460826 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
HDLBP-229ENST00000460826 NEBP20929 6669 aa5.49□□□□□ -1.53
HDLBP-229ENST00000460826 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
HDLBP-229ENST00000460826 MDN1Q9NU22 5596 aa5.46□□□□□ -1.53
HDLBP-229ENST00000460826 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
HDLBP-229ENST00000460826 C10orf95Q9H7T3 257 aa5.42□□□□□ -1.54
HDLBP-229ENST00000460826 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
HDLBP-229ENST00000460826 A6NED7 52 aa5.35□□□□□ -1.55
HDLBP-229ENST00000460826 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
HDLBP-229ENST00000460826 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
HDLBP-229ENST00000460826 SPRR2EP22531 72 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms