RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
TRAPPC12-211ENST00000452495 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
TRAPPC12-211ENST00000452495 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
TRAPPC12-211ENST00000452495 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
TRAPPC12-211ENST00000452495 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.26
TRAPPC12-211ENST00000452495 H3BPC8 53 aa7.2□□□□□ -1.26
TRAPPC12-211ENST00000452495 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
TRAPPC12-211ENST00000452495 LINC00208Q96KT6 92 aa7.19□□□□□ -1.26
TRAPPC12-211ENST00000452495 KRTAP4-11Q9BYQ6 195 aa7.18□□□□□ -1.26
TRAPPC12-211ENST00000452495 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC12-211ENST00000452495 TRAV7A0A075B6U4 112 aa7.16□□□□□ -1.26
TRAPPC12-211ENST00000452495 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
TRAPPC12-211ENST00000452495 KLKP1Q107X0 134 aa7.09□□□□□ -1.27
TRAPPC12-211ENST00000452495 LCE5AQ5TCM9 118 aa7.07□□□□□ -1.28
TRAPPC12-211ENST00000452495 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
TRAPPC12-211ENST00000452495 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
TRAPPC12-211ENST00000452495 A8MUN3 132 aa7.04□□□□□ -1.28
TRAPPC12-211ENST00000452495 S4R3F8 94 aa7.04□□□□□ -1.28
TRAPPC12-211ENST00000452495 KRTAP9-8Q9BYQ0 159 aa7□□□□□ -1.29
TRAPPC12-211ENST00000452495 LCA10Q71F78 164 aa6.98□□□□□ -1.29
TRAPPC12-211ENST00000452495 MT2AP02795 61 aa6.95□□□□□ -1.3
TRAPPC12-211ENST00000452495 C20orf197Q8N268 126 aa6.95□□□□□ -1.3
TRAPPC12-211ENST00000452495 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
TRAPPC12-211ENST00000452495 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
TRAPPC12-211ENST00000452495 CSAG1Q6PB30 78 aa6.93□□□□□ -1.3
TRAPPC12-211ENST00000452495 COX7CP15954 63 aa6.92□□□□□ -1.3
TRAPPC12-211ENST00000452495 MT1FP04733 61 aa6.9□□□□□ -1.3
TRAPPC12-211ENST00000452495 NDUFC1O43677 76 aa6.87□□□□□ -1.31
TRAPPC12-211ENST00000452495 KRTAP10-10P60014 251 aa6.87□□□□□ -1.31
TRAPPC12-211ENST00000452495 ANAPC13Q9BS18 74 aa6.87□□□□□ -1.31
TRAPPC12-211ENST00000452495 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
TRAPPC12-211ENST00000452495 ACYP2P14621 99 aa6.83□□□□□ -1.32
TRAPPC12-211ENST00000452495 H0YAA0 97 aa6.76□□□□□ -1.33
TRAPPC12-211ENST00000452495 H7BZZ5 65 aa6.74□□□□□ -1.33
TRAPPC12-211ENST00000452495 CYSTM1Q9H1C7 97 aa6.73□□□□□ -1.33
TRAPPC12-211ENST00000452495 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
TRAPPC12-211ENST00000452495 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
TRAPPC12-211ENST00000452495 CHKB-CPT1BH3BT56 60 aa6.71□□□□□ -1.34
TRAPPC12-211ENST00000452495 CCDC179H3BU77 68 aa6.68□□□□□ -1.34
TRAPPC12-211ENST00000452495 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
TRAPPC12-211ENST00000452495 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
TRAPPC12-211ENST00000452495 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
TRAPPC12-211ENST00000452495 COA5Q86WW8 74 aa6.62□□□□□ -1.35
TRAPPC12-211ENST00000452495 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
TRAPPC12-211ENST00000452495 CRCT1Q9UGL9 99 aa6.59□□□□□ -1.35
TRAPPC12-211ENST00000452495 ATP5EP56381 51 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC12-211ENST00000452495 USH2AO75445 5202 aa6.56□□□□□ -1.36
TRAPPC12-211ENST00000452495 P0C880 135 aa6.52□□□□□ -1.37
TRAPPC12-211ENST00000452495 TMEM258P61165 79 aa6.52□□□□□ -1.37
TRAPPC12-211ENST00000452495 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
TRAPPC12-211ENST00000452495 Q5VV11 94 aa6.47□□□□□ -1.37
TRAPPC12-211ENST00000452495 R4GN34 69 aa6.47□□□□□ -1.37
TRAPPC12-211ENST00000452495 M0QZ58 72 aa6.43□□□□□ -1.38
TRAPPC12-211ENST00000452495 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
TRAPPC12-211ENST00000452495 MT1BP07438 61 aa6.42□□□□□ -1.38
TRAPPC12-211ENST00000452495 SEC61GP60059 68 aa6.4□□□□□ -1.38
TRAPPC12-211ENST00000452495 KRTAP19-6Q3LI70 58 aa6.4□□□□□ -1.38
TRAPPC12-211ENST00000452495 SERP1Q9Y6X1 66 aa6.36□□□□□ -1.39
TRAPPC12-211ENST00000452495 PCP4P48539 62 aa6.3□□□□□ -1.4
TRAPPC12-211ENST00000452495 A0A1B0GU69 56 aa6.29□□□□□ -1.4
TRAPPC12-211ENST00000452495 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
TRAPPC12-211ENST00000452495 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
TRAPPC12-211ENST00000452495 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
TRAPPC12-211ENST00000452495 A0A1B0GU33 70 aa6.23□□□□□ -1.41
TRAPPC12-211ENST00000452495 A6NN06 94 aa6.23□□□□□ -1.41
TRAPPC12-211ENST00000452495 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
TRAPPC12-211ENST00000452495 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
TRAPPC12-211ENST00000452495 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
TRAPPC12-211ENST00000452495 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
TRAPPC12-211ENST00000452495 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
TRAPPC12-211ENST00000452495 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
TRAPPC12-211ENST00000452495 MT1XP80297 61 aa6.11□□□□□ -1.43
TRAPPC12-211ENST00000452495 V9GYY9 64 aa6.1□□□□□ -1.43
TRAPPC12-211ENST00000452495 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
TRAPPC12-211ENST00000452495 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
TRAPPC12-211ENST00000452495 A0A0D9SG42 100 aa6.07□□□□□ -1.44
TRAPPC12-211ENST00000452495 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
TRAPPC12-211ENST00000452495 Q1T7F1 81 aa6.05□□□□□ -1.44
TRAPPC12-211ENST00000452495 UQCR11O14957 56 aa6.01□□□□□ -1.45
TRAPPC12-211ENST00000452495 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
TRAPPC12-211ENST00000452495 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
TRAPPC12-211ENST00000452495 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
TRAPPC12-211ENST00000452495 A8MU10 97 aa5.97□□□□□ -1.45
TRAPPC12-211ENST00000452495 PSPHP1O15172 72 aa5.95□□□□□ -1.46
TRAPPC12-211ENST00000452495 KRTAP12-2P59991 146 aa5.93□□□□□ -1.46
TRAPPC12-211ENST00000452495 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
TRAPPC12-211ENST00000452495 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
TRAPPC12-211ENST00000452495 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
TRAPPC12-211ENST00000452495 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
TRAPPC12-211ENST00000452495 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
TRAPPC12-211ENST00000452495 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
TRAPPC12-211ENST00000452495 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
TRAPPC12-211ENST00000452495 A6NED7 52 aa5.8□□□□□ -1.48
TRAPPC12-211ENST00000452495 K7ERS5 55 aa5.75□□□□□ -1.49
TRAPPC12-211ENST00000452495 KRTAP5-9P26371 169 aa5.74□□□□□ -1.49
TRAPPC12-211ENST00000452495 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
TRAPPC12-211ENST00000452495 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
TRAPPC12-211ENST00000452495 KMT2DO14686 5537 aa5.68□□□□□ -1.5
TRAPPC12-211ENST00000452495 TNP1P09430 55 aa5.63□□□□□ -1.51
TRAPPC12-211ENST00000452495 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms