RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TRAV7A0A075B6U4 112 aa5.9□□□□□ -1.47
LINC00339-205ENST00000452322 M0R2T5 61 aa5.89□□□□□ -1.47
LINC00339-205ENST00000452322 KRTAP4-9Q9BYQ8 210 aa5.88□□□□□ -1.47
LINC00339-205ENST00000452322 H1FX-AS1Q4G0G2 97 aa5.87□□□□□ -1.47
LINC00339-205ENST00000452322 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
LINC00339-205ENST00000452322 KLKP1Q107X0 134 aa5.82□□□□□ -1.48
LINC00339-205ENST00000452322 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
LINC00339-205ENST00000452322 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
LINC00339-205ENST00000452322 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
LINC00339-205ENST00000452322 A8MUN3 132 aa5.76□□□□□ -1.49
LINC00339-205ENST00000452322 S4R3F8 94 aa5.75□□□□□ -1.49
LINC00339-205ENST00000452322 C20orf197Q8N268 126 aa5.73□□□□□ -1.49
LINC00339-205ENST00000452322 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
LINC00339-205ENST00000452322 COX7CP15954 63 aa5.72□□□□□ -1.49
LINC00339-205ENST00000452322 LCA10Q71F78 164 aa5.71□□□□□ -1.5
LINC00339-205ENST00000452322 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
LINC00339-205ENST00000452322 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
LINC00339-205ENST00000452322 ANAPC13Q9BS18 74 aa5.67□□□□□ -1.5
LINC00339-205ENST00000452322 MT2AP02795 61 aa5.66□□□□□ -1.5
LINC00339-205ENST00000452322 CSAG1Q6PB30 78 aa5.66□□□□□ -1.5
LINC00339-205ENST00000452322 SPANXA2-OT1Q8N9U9 137 aa5.64□□□□□ -1.51
LINC00339-205ENST00000452322 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
LINC00339-205ENST00000452322 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
LINC00339-205ENST00000452322 H3BS24 57 aa5.62□□□□□ -1.51
LINC00339-205ENST00000452322 NDUFC1O43677 76 aa5.62□□□□□ -1.51
LINC00339-205ENST00000452322 MT1FP04733 61 aa5.61□□□□□ -1.51
LINC00339-205ENST00000452322 ACYP2P14621 99 aa5.6□□□□□ -1.51
LINC00339-205ENST00000452322 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
LINC00339-205ENST00000452322 H7BZZ5 65 aa5.56□□□□□ -1.52
LINC00339-205ENST00000452322 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
LINC00339-205ENST00000452322 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
LINC00339-205ENST00000452322 H0YAA0 97 aa5.51□□□□□ -1.53
LINC00339-205ENST00000452322 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
LINC00339-205ENST00000452322 CHKB-CPT1BH3BT56 60 aa5.5□□□□□ -1.53
LINC00339-205ENST00000452322 SPTSSBQ8NFR3 76 aa5.48□□□□□ -1.53
LINC00339-205ENST00000452322 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
LINC00339-205ENST00000452322 FSIP2Q5CZC0 6907 aa5.45□□□□□ -1.54
LINC00339-205ENST00000452322 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
LINC00339-205ENST00000452322 COA5Q86WW8 74 aa5.44□□□□□ -1.54
LINC00339-205ENST00000452322 USH2AO75445 5202 aa5.44□□□□□ -1.54
LINC00339-205ENST00000452322 ADM2Q7Z4H4 148 aa5.42□□□□□ -1.54
LINC00339-205ENST00000452322 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
LINC00339-205ENST00000452322 KRTAP19-4Q3LI73 84 aa5.41□□□□□ -1.54
LINC00339-205ENST00000452322 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
LINC00339-205ENST00000452322 TMEM258P61165 79 aa5.37□□□□□ -1.55
LINC00339-205ENST00000452322 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
LINC00339-205ENST00000452322 P0C880 135 aa5.35□□□□□ -1.55
LINC00339-205ENST00000452322 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
LINC00339-205ENST00000452322 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
LINC00339-205ENST00000452322 KRTAP19-8Q3LI54 63 aa5.29□□□□□ -1.56
LINC00339-205ENST00000452322 R4GN34 69 aa5.29□□□□□ -1.56
LINC00339-205ENST00000452322 PCP4P48539 62 aa5.27□□□□□ -1.57
LINC00339-205ENST00000452322 M0QZ58 72 aa5.25□□□□□ -1.57
LINC00339-205ENST00000452322 Q5VV11 94 aa5.25□□□□□ -1.57
LINC00339-205ENST00000452322 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
LINC00339-205ENST00000452322 SEC61GP60059 68 aa5.24□□□□□ -1.57
LINC00339-205ENST00000452322 MT1BP07438 61 aa5.23□□□□□ -1.57
LINC00339-205ENST00000452322 SERP1Q9Y6X1 66 aa5.22□□□□□ -1.57
LINC00339-205ENST00000452322 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
LINC00339-205ENST00000452322 A0A1B0GU69 56 aa5.16□□□□□ -1.58
LINC00339-205ENST00000452322 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
LINC00339-205ENST00000452322 LINC01554Q52M75 96 aa5.14□□□□□ -1.59
LINC00339-205ENST00000452322 LINC01558Q9Y6Z2 57 aa5.13□□□□□ -1.59
LINC00339-205ENST00000452322 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
LINC00339-205ENST00000452322 A0A1B0GU33 70 aa5.11□□□□□ -1.59
LINC00339-205ENST00000452322 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
LINC00339-205ENST00000452322 PRR15LQ9BU68 103 aa5.1□□□□□ -1.59
LINC00339-205ENST00000452322 A6NN06 94 aa5.07□□□□□ -1.6
LINC00339-205ENST00000452322 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
LINC00339-205ENST00000452322 SPATA8Q6RVD6 105 aa5.04□□□□□ -1.6
LINC00339-205ENST00000452322 V9GYY9 64 aa5.03□□□□□ -1.6
LINC00339-205ENST00000452322 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
LINC00339-205ENST00000452322 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
LINC00339-205ENST00000452322 Q1T7F1 81 aa5□□□□□ -1.61
LINC00339-205ENST00000452322 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
LINC00339-205ENST00000452322 A0A0D9SG42 100 aa4.98□□□□□ -1.61
LINC00339-205ENST00000452322 MT1XP80297 61 aa4.98□□□□□ -1.61
LINC00339-205ENST00000452322 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
LINC00339-205ENST00000452322 UQCR11O14957 56 aa4.94□□□□□ -1.62
LINC00339-205ENST00000452322 PSPHP1O15172 72 aa4.92□□□□□ -1.62
LINC00339-205ENST00000452322 A8MU10 97 aa4.91□□□□□ -1.62
LINC00339-205ENST00000452322 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
LINC00339-205ENST00000452322 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
LINC00339-205ENST00000452322 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
LINC00339-205ENST00000452322 SYNE2Q8WXH0 6885 aaKnown RBP4.89□□□□□ -1.63
LINC00339-205ENST00000452322 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
LINC00339-205ENST00000452322 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
LINC00339-205ENST00000452322 MIR22HGQ0VDD5 57 aa4.85□□□□□ -1.63
LINC00339-205ENST00000452322 A6NED7 52 aa4.78□□□□□ -1.64
LINC00339-205ENST00000452322 KMT2DO14686 5537 aa4.78□□□□□ -1.64
LINC00339-205ENST00000452322 KRTAP10-7P60409 375 aaPredicted RBP4.76□□□□□ -1.65
LINC00339-205ENST00000452322 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
LINC00339-205ENST00000452322 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
LINC00339-205ENST00000452322 K7ERS5 55 aa4.71□□□□□ -1.66
LINC00339-205ENST00000452322 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
LINC00339-205ENST00000452322 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.66
LINC00339-205ENST00000452322 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.66
LINC00339-205ENST00000452322 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
LINC00339-205ENST00000452322 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
LINC00339-205ENST00000452322 TNP1P09430 55 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms