RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
SF1-210ENST00000443908 KRTAP3-1Q9BYR8 98 aa6.75□□□□□ -1.33
SF1-210ENST00000443908 FAM236DA0A1B0GTK5 79 aa6.73□□□□□ -1.33
SF1-210ENST00000443908 FAM236CP0DP71 79 aa6.73□□□□□ -1.33
SF1-210ENST00000443908 KRTAP10-6P60371 365 aaPredicted RBP6.73□□□□□ -1.33
SF1-210ENST00000443908 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.34
SF1-210ENST00000443908 H1FX-AS1Q4G0G2 97 aa6.7□□□□□ -1.34
SF1-210ENST00000443908 ACYP2P14621 99 aa6.69□□□□□ -1.34
SF1-210ENST00000443908 S4R3F8 94 aa6.6□□□□□ -1.35
SF1-210ENST00000443908 COA5Q86WW8 74 aa6.59□□□□□ -1.35
SF1-210ENST00000443908 LCA10Q71F78 164 aa6.56□□□□□ -1.36
SF1-210ENST00000443908 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
SF1-210ENST00000443908 SERP1Q9Y6X1 66 aa6.55□□□□□ -1.36
SF1-210ENST00000443908 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
SF1-210ENST00000443908 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
SF1-210ENST00000443908 SPTSSBQ8NFR3 76 aa6.52□□□□□ -1.37
SF1-210ENST00000443908 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
SF1-210ENST00000443908 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
SF1-210ENST00000443908 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.47□□□□□ -1.37
SF1-210ENST00000443908 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
SF1-210ENST00000443908 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
SF1-210ENST00000443908 H0YAA0 97 aa6.38□□□□□ -1.39
SF1-210ENST00000443908 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
SF1-210ENST00000443908 USH2AO75445 5202 aa6.34□□□□□ -1.39
SF1-210ENST00000443908 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
SF1-210ENST00000443908 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
SF1-210ENST00000443908 V9GYY9 64 aa6.3□□□□□ -1.4
SF1-210ENST00000443908 MT2AP02795 61 aa6.28□□□□□ -1.4
SF1-210ENST00000443908 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
SF1-210ENST00000443908 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
SF1-210ENST00000443908 Q1T7F1 81 aa6.27□□□□□ -1.41
SF1-210ENST00000443908 SEC61GP60059 68 aa6.26□□□□□ -1.41
SF1-210ENST00000443908 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
SF1-210ENST00000443908 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
SF1-210ENST00000443908 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
SF1-210ENST00000443908 A0A1B0GU69 56 aa6.24□□□□□ -1.41
SF1-210ENST00000443908 LCE2BO14633 110 aa6.24□□□□□ -1.41
SF1-210ENST00000443908 MT1FP04733 61 aa6.23□□□□□ -1.41
SF1-210ENST00000443908 PRR15LQ9BU68 103 aa6.22□□□□□ -1.41
SF1-210ENST00000443908 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
SF1-210ENST00000443908 P0C880 135 aa6.19□□□□□ -1.42
SF1-210ENST00000443908 CRIPTQ9P021 101 aa6.17□□□□□ -1.42
SF1-210ENST00000443908 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
SF1-210ENST00000443908 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
SF1-210ENST00000443908 PSPHP1O15172 72 aa6.11□□□□□ -1.43
SF1-210ENST00000443908 A0A1B0GU33 70 aa6.1□□□□□ -1.43
SF1-210ENST00000443908 Q5VV11 94 aa6.1□□□□□ -1.43
SF1-210ENST00000443908 M0QZ58 72 aa6.08□□□□□ -1.44
SF1-210ENST00000443908 R4GN34 69 aa6.07□□□□□ -1.44
SF1-210ENST00000443908 KRTAP19-6Q3LI70 58 aa6.05□□□□□ -1.44
SF1-210ENST00000443908 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
SF1-210ENST00000443908 UQCR11O14957 56 aa6.04□□□□□ -1.44
SF1-210ENST00000443908 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
SF1-210ENST00000443908 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
SF1-210ENST00000443908 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
SF1-210ENST00000443908 A6NED7 52 aa5.95□□□□□ -1.46
SF1-210ENST00000443908 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
SF1-210ENST00000443908 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
SF1-210ENST00000443908 A6NN06 94 aa5.91□□□□□ -1.46
SF1-210ENST00000443908 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
SF1-210ENST00000443908 A8MU10 97 aa5.86□□□□□ -1.47
SF1-210ENST00000443908 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
SF1-210ENST00000443908 A0A0D9SG42 100 aa5.85□□□□□ -1.47
SF1-210ENST00000443908 MT1BP07438 61 aa5.83□□□□□ -1.48
SF1-210ENST00000443908 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
SF1-210ENST00000443908 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
SF1-210ENST00000443908 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
SF1-210ENST00000443908 NEBP20929 6669 aa5.74□□□□□ -1.49
SF1-210ENST00000443908 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
SF1-210ENST00000443908 BRK1Q8WUW1 75 aa5.74□□□□□ -1.49
SF1-210ENST00000443908 K7ERS5 55 aa5.72□□□□□ -1.49
SF1-210ENST00000443908 KRTAP20-1Q3LI63 56 aa5.69□□□□□ -1.5
SF1-210ENST00000443908 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
SF1-210ENST00000443908 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
SF1-210ENST00000443908 MT1XP80297 61 aa5.6□□□□□ -1.51
SF1-210ENST00000443908 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
SF1-210ENST00000443908 KRTAP10-5P60370 271 aa5.59□□□□□ -1.51
SF1-210ENST00000443908 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
SF1-210ENST00000443908 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
SF1-210ENST00000443908 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
SF1-210ENST00000443908 KMT2DO14686 5537 aa5.47□□□□□ -1.53
SF1-210ENST00000443908 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
SF1-210ENST00000443908 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
SF1-210ENST00000443908 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
SF1-210ENST00000443908 ROMO1P60602 79 aa5.44□□□□□ -1.54
SF1-210ENST00000443908 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
SF1-210ENST00000443908 TNP1P09430 55 aa5.38□□□□□ -1.55
SF1-210ENST00000443908 SPRR2FQ96RM1 72 aa5.38□□□□□ -1.55
SF1-210ENST00000443908 SPRR2EP22531 72 aa5.37□□□□□ -1.55
SF1-210ENST00000443908 SPRR2BP35325 72 aa5.37□□□□□ -1.55
SF1-210ENST00000443908 SPRR2AP35326 72 aa5.37□□□□□ -1.55
SF1-210ENST00000443908 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
SF1-210ENST00000443908 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
SF1-210ENST00000443908 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
SF1-210ENST00000443908 KRTAP8-1Q8IUC2 63 aa5.28□□□□□ -1.56
SF1-210ENST00000443908 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
SF1-210ENST00000443908 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
SF1-210ENST00000443908 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
SF1-210ENST00000443908 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
SF1-210ENST00000443908 SPRR2DP22532 72 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms